Tpod056433.1
Basic Information
- Insect
- Timema podura
- Gene Symbol
- Mblk-1
- Assembly
- GCA_033556935.1
- Location
- JAVRXN010000013.1:46511684-46517488[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-12 8.7e-10 40.0 0.1 1 38 66 103 66 106 0.94
Sequence Information
- Coding Sequence
- ATGTACCTGATCTGTATTAATAAAGGGCTCGGCCAGTCTCCTCTTGTGCTGGCGACTGTCCTCCCGGACCGTCCTCTGACCCAGCGTGCCCGCAGTATAAGAGCGCGGGTCGGAGGTCGTCACCAGGAGGAGGGGATATCATGGGTCGTCAGCATGCCGCGCCATTACGAAAGAAAAACGAATAGGGCGAGTTGGACTGAAGAAAGTATGTCAGGAGCTATACGAGAAGTTTTACAAGGGAAAATGGGTTACAAGAGAGCGTCACAAGCTTATGGTGTTCCCCAGACAACATTGGAGGATAGAATTAGAAAGGCCCGAAAATAA
- Protein Sequence
- MYLICINKGLGQSPLVLATVLPDRPLTQRARSIRARVGGRHQEEGISWVVSMPRHYERKTNRASWTEESMSGAIREVLQGKMGYKRASQAYGVPQTTLEDRIRKARK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -