Tpod045384.1
Basic Information
- Insect
- Timema podura
- Gene Symbol
- Mblk-1
- Assembly
- GCA_033556935.1
- Location
- JAVRXN010000011.1:10437873-10439792[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-17 9.4e-15 55.9 0.1 1 45 11 56 11 56 0.96 2 2 1.1e-17 3.4e-15 57.3 0.0 1 43 455 498 455 500 0.95
Sequence Information
- Coding Sequence
- ATGAGCGCTATCTCAGGACGGCGAACATACACGGAAGATGAACTTCAGGCAGCTTTACGAGACATCCAAAGTGGTAAGTTGGGCACAAGGCGCGCCGCTGTAATTTATGGCATCCCACGCTCTACTCTGCGCAACAAGGTATACAAACTAGCAATGGAACGAGAGCGTGACTCTCATTTGGTTGCTGCAGAGGCTCTCAAGGTCGAAGAAGATGAGAAGGAGCTATCAGCTGCAGAAGAAGAACAGGAGGTAGAAAAAGTTCTGAGGAAACCTTTACTGTCCATGGAAGACTTGATTCGTTTTTCTGTGCTTGATGGCAGTGGGAGTACTTCTGATTCATTGCGAGCACTCCTGCGGCTTCATGAAGAGAGGTCTGGTAGTACTTCTCCATCCGAGTGTTTACCTTTTCCTCTTGACATGTGGGGTGGCCTTGAGCATAGTACACTTGCTCCATACATTTCTAACCTCCTTGCAGCCGCTGGTATGTCCAACAGGGTTTCACACAGGGAAAGTATCCCTGCAAACTTTGCAAAGTTCCCAAATCACCTTCTGCCGGAAATCATGCGAAGGATGGTGACTGAAGAGAAGATTTTATTTGAcgaacatttaagaaaaaacataaGTATTGGGCCAAGCATTCACTTGAATGGCAGCCACTCAGAAGATGAAGAAACTAGAAAAAATAGGCGCGAGGTTATCGTACATCCCAAGGCAACATCAAGGGAAGATGATGAGTTTATGGATGTTGACACAGCAGGTACTGCAGCTTCCGGAACGGCCACCCCACCCAATGTGATACTGAGAATTCCGTCCTTCAAACCGACTTCAAAGAATGGAGTGGCATCCGGCAGCAGTGGTGGTGTAGAGCCTTTGCTCCTGaatcaaaatatacataaaagtGATGTTGCCAGCCCCGGGCTTGTTCAAGTGTCTAgtcagccattttgttttgaaacacACAGTAACAGTGACTCGTGTTCTCCCCCAGTTAACAGCTTAATCGGGAAAGGTGTTGGGGTGAGTTTAAGGGATGTTATTGCAAAAAGCATCAGTCAAAAGTTTCAGCAACACAGTGTTGAAACCATGTTGCCTCTTTCTCATCCCCAACATAAAATACTTTCCTCCTCTAATGAAATAGATGACCCAACATATTCTCATAGACAATTCACTCCTCCACTTAGTAACACTCCATCATCTATTGCCGCTTCtgttattaaaaacaacaataacaacatcCACGAAGACCGTAATGTGCAAAAGTTGTCTCCTATAAATAAATCACCCTCAAGCAGTAGCTCTACTGGCTGCACAAGCACTGGGGGGAAAGGTACAAGGCCAAAACGGGGCAAGTATCGTAACTATGACAGAGACAGCCTTGTCGAGGCTGTGCGAGCTGTCCAAAGGGGAGAAATGAGTGTCCATAGGGCCGGCTCGTATTATGGTGTTCCTCACTCAACTCTGGAGTACAAAGTGAAAGAGCGACATTTAATGAGGCCACGCAAACGAGAACCGAAGACGCATATTGATGACACTAAGCGAAAGGATGAGTGCTTGAGGATGTCTTCCCCAGACAAACCCAAGTTGTCCCAGAAGCCTTTTAAACCTCTCTATAGACCATCCTCTCCCCTTTCAAACCCACCAAATGGATTAAAAATGCCACCCCTTTTTGATCCAAATATGCCTCTACCATATCCACCTGCACCACCCTTTCCATTCTGGCCAACAAACCCATTTCATTCCCTCCCTCTTTCGGATTTCCCTCGTGGAACAGGGGGTCCTCCTGGTTTTAGTTCTACACATGAACAGTTCTATGCCTCTCAAATGATGCAAAGATTACAAGAAGACTCATCCGTTCACATCCAAGCATTAGTCCTGGTGTTTCTTGTAGTCCGCCTATCGTTGGGCCTGGCAGCACACTAG
- Protein Sequence
- MSAISGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDSHLVAAEALKVEEDEKELSAAEEEQEVEKVLRKPLLSMEDLIRFSVLDGSGSTSDSLRALLRLHEERSGSTSPSECLPFPLDMWGGLEHSTLAPYISNLLAAAGMSNRVSHRESIPANFAKFPNHLLPEIMRRMVTEEKILFDEHLRKNISIGPSIHLNGSHSEDEETRKNRREVIVHPKATSREDDEFMDVDTAGTAASGTATPPNVILRIPSFKPTSKNGVASGSSGGVEPLLLNQNIHKSDVASPGLVQVSSQPFCFETHSNSDSCSPPVNSLIGKGVGVSLRDVIAKSISQKFQQHSVETMLPLSHPQHKILSSSNEIDDPTYSHRQFTPPLSNTPSSIAASVIKNNNNNIHEDRNVQKLSPINKSPSSSSSTGCTSTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKTHIDDTKRKDECLRMSSPDKPKLSQKPFKPLYRPSSPLSNPPNGLKMPPLFDPNMPLPYPPAPPFPFWPTNPFHSLPLSDFPRGTGGPPGFSSTHEQFYASQMMQRLQEDSSVHIQALVLVFLVVRLSLGLAAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -