Tpod010590.1
Basic Information
- Insect
- Timema podura
- Gene Symbol
- -
- Assembly
- GCA_033556935.1
- Location
- JAVRXN010000003.1:35482490-35490259[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.079 6.4e+02 2.6 0.0 25 42 74 91 60 94 0.83 2 13 0.091 7.4e+02 2.4 0.0 25 42 96 113 91 116 0.85 3 13 0.074 6.1e+02 2.7 0.0 25 42 118 135 113 139 0.87 4 13 0.024 1.9e+02 4.3 0.1 24 41 161 178 136 190 0.64 5 13 0.083 6.8e+02 2.6 0.0 25 42 185 202 179 211 0.84 6 13 0.053 4.3e+02 3.2 0.0 25 42 207 224 201 232 0.85 7 13 0.085 7e+02 2.5 0.0 25 42 229 246 223 249 0.85 8 13 0.025 2e+02 4.2 0.1 28 42 254 268 245 295 0.59 9 13 0.049 4e+02 3.3 0.0 25 45 295 315 290 324 0.80 10 13 0.0036 29 6.9 0.0 24 48 339 363 323 373 0.80 11 13 0.08 6.5e+02 2.6 0.0 25 42 372 389 362 392 0.83 12 13 0.1 8.5e+02 2.2 0.0 25 42 394 411 390 418 0.86 13 13 0.058 4.8e+02 3.0 0.1 25 47 437 459 413 466 0.78
Sequence Information
- Coding Sequence
- ATGGAGGTTTGTGTTCACACGGGCAACACAGTAACTAGACTGCCATTGGAGGCTTGTGTTTACACAGGCAACACAGTAGCTAGACAGTGCCAGTGGAGGCATGTGTTCACACAGGCAACACAGCAGTGGCTGTACGATCAGAACACTGGCTGGCCTAGCTGTGAGCAAGACAGGACCTGCGAAACTTGGGACATGGGAGTGTGTAGTAGCAACTGTGATACTATCCATTCAACAACACTAGACCTCTTGTTGCTTTACCAGGTGGTGTGTAGTAGCAACTGTGATACTATCCATTCAACAACACTAGACCTCTTGTTGCTTTACCAGATGGTGTGTAGTAGCAACTGTGATACTATCAATTCAACAACACTAGACCTCTTGTTGCTTTACCAGGTGGTGTGTAGTAGCATCTGTGATACTATCCATTCAACAACACTAGACCTCTTGTTGCTTTACCAGATGGTGTGTAGTAGCAACTGTGATACTATCAATTCAACAACACTAGACCTCTTGTTGCTTTACCAGATGGTGGTGTGTAGTAGCAACTGTGATACTATCCATTCAACAACACTAGACCTCTTGTTGCTTTACCAGGTGGTGTGTAGTAGCAACTGTGATACTATCCAATCAACAACACTAGACCTCTTGTTGCTTTACCAGGTGGTGTGTAGTAGCAACTGTGATACTATCCATTCAACAACACTAGACCTCTTGTTGCTTTACCAGATGGTGTGTAGTAGCAACTGTGATACTATCCAATCAACAACACTAGACCTCTTGTTGCTTTACCAGGTGGTGTGTAGTAGCAACTGTGATACTATCCATTCAACAACACTAGACCTCTTGTTGCTTTACCAGATGGTGTGTAGTAGCAACTGTGATACTATCAATTCAACAACACTAGACCTCTTGTTGCTTTACCAGATGGTGGTGTATAGTAGTAACTGTGATACTATCCAATCAATAACACTAGTCCTCTTGTTGTTTTACCAGGTTATGTGTAGTAGCAACTGTGATACTATCCATTCAACAACACTAGACCTCTTGTTGCTTTACCAGGTGGTGTGTAGTCAGGGGTCGTGGTGTGTAGTCAGGGGTCGTAGCAACTGTGATACTATCCATTCAACAACACTAGACCTCTTGCTGCTTTACCAGGTGGTGTGTAGTAGCAACTGTGATACTATCCAATCAACAACACTAGACCTCTTGTTGCTTTACCAGGTGGTGTATAGTAGCAACTGTGATACTATCCAAACAACACTAGACCTCTTGCTGCTTTACCAGGTGGTGTATAGTATCAACTGTGATACTATCCATTCAACAACACTAGATCTCTTGTTGCTTTACCAGTTGGTGTATATCATTGGTGACTCGCAGTCACTCGCACGAGAGTATAATGTATCTATTGTTATCTGTTTACCGTGTAAGGCCACGTCCATACTGGCGAGTACGCAATGCCTTGTTAAGGTAAGTGCACACAGGTATTACGAGTGGAGCGGGCATTCGACACACATACAGCGATGTGAAGCGGAGCAGGGCGGCACTTCTAGAGCAGTGCAGCCCCAGAGCAAGGCGTATGACCTCACACCTCTCAAGCAATCCAAACTCCCCATTATCTGGGTGTTGGTCAAGTTGGAGAGTGATGTTTCGTGCTCATTGGGGAGTCTTGCTCTGGATGTCCTCGTTGTCGAGTCAAGTTGGAGAGTGATGTTTCGTGCTCATTGGGGAGTCTTGCTCTGGATGTCCTCGTTGTCTAGTCAAGTTGGAGAGTGA
- Protein Sequence
- MEVCVHTGNTVTRLPLEACVYTGNTVARQCQWRHVFTQATQQWLYDQNTGWPSCEQDRTCETWDMGVCSSNCDTIHSTTLDLLLLYQVVCSSNCDTIHSTTLDLLLLYQMVCSSNCDTINSTTLDLLLLYQVVCSSICDTIHSTTLDLLLLYQMVCSSNCDTINSTTLDLLLLYQMVVCSSNCDTIHSTTLDLLLLYQVVCSSNCDTIQSTTLDLLLLYQVVCSSNCDTIHSTTLDLLLLYQMVCSSNCDTIQSTTLDLLLLYQVVCSSNCDTIHSTTLDLLLLYQMVCSSNCDTINSTTLDLLLLYQMVVYSSNCDTIQSITLVLLLFYQVMCSSNCDTIHSTTLDLLLLYQVVCSQGSWCVVRGRSNCDTIHSTTLDLLLLYQVVCSSNCDTIQSTTLDLLLLYQVVYSSNCDTIQTTLDLLLLYQVVYSINCDTIHSTTLDLLLLYQLVYIIGDSQSLAREYNVSIVICLPCKATSILASTQCLVKVSAHRYYEWSGHSTHIQRCEAEQGGTSRAVQPQSKAYDLTPLKQSKLPIIWVLVKLESDVSCSLGSLALDVLVVESSWRVMFRAHWGVLLWMSSLSSQVGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -