Tpod029548.1
Basic Information
- Insect
- Timema podura
- Gene Symbol
- ARID5B
- Assembly
- GCA_033556935.1
- Location
- JAVRXN010000008.1:53953541-53965465[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-25 1.7e-21 78.2 0.0 1 89 173 259 173 259 0.95
Sequence Information
- Coding Sequence
- ATGCGTGAATGTAGGTATCCGCCATACCAACAAAGACCACTCTTGGCGAAAAGGAGGATGGAAGCGGAAAGGGGTCATGAGCACCAGGGGTCCACGGTGGTGGTGCTGAGTTTCCCCCGGTACTGCCGGTACCGCGGCATCATCAAGAGGCTGGAGGGGATCGCGGACAAGTGGCTGAGGAACACCCTGGTGGTGGCCCTGGGAGGGTTCGCGGTCCCTCGACAGAACACCCGCATACTCTTCTGCAGGGACACCTTTGATTACCCGGACCTCGAGGGGCATGAGCTGCTGTGCAACCATCTCGCTCCCAATTTAAAAGGGCGGCCTAGAAGAAAACGGAAAAAGAGAAGTCTTTCTCCCGGTGGTTCCGAGTCCAATGAGTCTGAGTCATCAATGTCCACAGTTTGCTCCACAGCGAGGTTTAAAAACAACTACGAGAGTGGCATTCCTGGTCGTAACGGCCTGCGGTGTAAACTAGTGCAGCTGCGAAGAAGTAGCCGTCTGGTTGTCAGCCCTGAAGAGAAGGAGTTCATGGTTAAACTTCACGGTTTCATGAAGATCCGTCGTACACCTATAGACAGGGTCCCCCACCTCGGCTTCAAAGAGATTGACCTTTACGCGTTCTACAGCAAAGTACAGAAGTTGGGAGGATATGACAGTGTAACAACTAACCGCATGTGGAAGCCTATCTATGATGACCTCGGAGGCCACCAGGGTAGTACCAGTGCTGCCACCTATACAAGACGACACTATGAAAGGTTGTTATTACCGTACGAGTTGAGTGTAAGAGATAATCGAACCAAGGAAAGGAGGCGTGCGAAGCACAAACCAGAAAACAAGGAAAGCGTTAAGTCGACAAATACATACACTGTTACCCCCCCAGTCAGCACGTCTGTTAAAGAAGAACCAAAGaCTACTATAACAAAAGAAGGGGGAATAACTTCATCTTTGCGAAGTATCAGACTCAAAGCAGCAGACAAGTTTCCATCTCAAGACTTGGCTAACTCAACCAGGCCTAAAGACAAAGAAAACATCCCGGTTTCTAACGTGTCTGAAGGTATCACAGAGGTGAAGTTGGAAGCCTCAAGTGAAAATCCTGCGACAACGAAAACAGTGCCCGAACTCATCGACTTGGCTTCTGACCAAGACTCACCTGTCAAAGTACCCAAACCTCCCACCCCATTGTTCAAGAAAAGGAAATTAGAGATTCTAAAAGAGGGTGGCTTGGAAGTCACAGCCATCTCCTCGGCAATCTCTGTCCCTTCAAGAAACACAAGCCCGTTAACTGTGACCTCAGACAAGCGTCCGTCCGTGATTCAGCATGCTATGCCTACAATGCAGCCATTGAGTAGTCAAGTGTCCATCACAATAACTCCGGATCTCAACCACATGTTAGGCTCCCCTCTCACAGACACACCTTCCACGCCTTCTCCTGCCAAGAGCTTGGAAAGCAACAACAGTCCTCCTGAGTTAAGACCTCCATCCTTTACAACCCGTCTCAACCCCCCTAGGTGGGTGCCCCCACGTGTCACACAATCATGCTCTATCTATGCACACTCGGAGAGCACGGTGTATGGCAATCCTAAAGATGATATAGAGCCAGCGATATCCATCTACCGGAAACGTAATCTTGCAAGACCTATGCTATTACCACCAACTAGAGTTTTAACAAAGGATATAGAAGTGTTGGACTTGACAGTTAAAGGTACAGAAAAACCGGCGGTGAGTATAAGTCGTGTGCCAAGTGCTGTGAATCcagtttcaaacaatttaagaaattcTCCCAAATATCCTGTTAGGAACAATGGTTTTTCTTCCTTCCCATTCATGGATGGTAAGGCTGTGGTAGGCTCAAACTTAGAAATAACTGTTGTAGACGTGACAAAATCCTCGGCTCCGACAATGACACAGAGACATCCACCAAGTCAACATCATCAACGAAAATCTATACCAACTAAGTTAATTAATCGTAATGCATCTAGAAGTGAAAGTGAGAGACATACACATCAAAGAAATCACATTTCTGCTGCAACGGAACTGATCATTCCAAAGCCTATCTCGTCTTTGACCATGAACAACCgtaaaaatttaaatgagaCTTCAAGGAACAGAATGCAGCAAAGACCTTCCCAGCAACTTCAGACACCTCAACGAGCCCAGACAACGCAGTCTTCCAGGGCCCCCTCaccaaattcaaatttattccCCTTAAGTAACTCCCCTTTGTTTTCTAGCTACCTCTCCCAAACATCAGGCACCAAGTCTTCTCCAGCGTTCCTACCCCTTTTAGATCCCATGTACTACTCAGCGCTATATGGCCAAAGGATGATGGGCTCCAATGCGTCATCTCCCTTTTCCCCCACTATGTTTCCTCCTACGGCGGAACACTTACAGCTGTACAAGGAGTTGATGAGCCACCACAACACCCTCCGACTGGCCCAGCATCCCACTATGAGTGGTTTACTGGGGCTACCACGTGATGGATCCATCTCCATTACACCTGTCGGCCGGTCCAGCACGCCCACCTCTAAGTGA
- Protein Sequence
- MRECRYPPYQQRPLLAKRRMEAERGHEHQGSTVVVLSFPRYCRYRGIIKRLEGIADKWLRNTLVVALGGFAVPRQNTRILFCRDTFDYPDLEGHELLCNHLAPNLKGRPRRKRKKRSLSPGGSESNESESSMSTVCSTARFKNNYESGIPGRNGLRCKLVQLRRSSRLVVSPEEKEFMVKLHGFMKIRRTPIDRVPHLGFKEIDLYAFYSKVQKLGGYDSVTTNRMWKPIYDDLGGHQGSTSAATYTRRHYERLLLPYELSVRDNRTKERRRAKHKPENKESVKSTNTYTVTPPVSTSVKEEPKTTITKEGGITSSLRSIRLKAADKFPSQDLANSTRPKDKENIPVSNVSEGITEVKLEASSENPATTKTVPELIDLASDQDSPVKVPKPPTPLFKKRKLEILKEGGLEVTAISSAISVPSRNTSPLTVTSDKRPSVIQHAMPTMQPLSSQVSITITPDLNHMLGSPLTDTPSTPSPAKSLESNNSPPELRPPSFTTRLNPPRWVPPRVTQSCSIYAHSESTVYGNPKDDIEPAISIYRKRNLARPMLLPPTRVLTKDIEVLDLTVKGTEKPAVSISRVPSAVNPVSNNLRNSPKYPVRNNGFSSFPFMDGKAVVGSNLEITVVDVTKSSAPTMTQRHPPSQHHQRKSIPTKLINRNASRSESERHTHQRNHISAATELIIPKPISSLTMNNRKNLNETSRNRMQQRPSQQLQTPQRAQTTQSSRAPSPNSNLFPLSNSPLFSSYLSQTSGTKSSPAFLPLLDPMYYSALYGQRMMGSNASSPFSPTMFPPTAEHLQLYKELMSHHNTLRLAQHPTMSGLLGLPRDGSISITPVGRSSTPTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01445432;
- 90% Identity
- iTF_01447270; iTF_01444488; iTF_01450252; iTF_01445432; iTF_01448226;
- 80% Identity
- -