Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00016 1.4 10.6 0.2 7 28 10 26 8 34 0.76

2 5 3.1e-05 0.28 12.9 0.5 7 32 39 59 37 63 0.81

3 5 0.00016 1.4 10.7 0.3 7 33 68 89 66 92 0.81

4 5 0.011 1e+02 4.7 0.1 7 31 97 116 95 120 0.80

5 5 0.028 2.6e+02 3.4 0.7 7 32 126 146 124 150 0.78

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00016	1.4	10.6	0.2	7	28	10	26	8	34	0.76
2	5	3.1e-05	0.28	12.9	0.5	7	32	39	59	37	63	0.81
3	5	0.00016	1.4	10.7	0.3	7	33	68	89	66	92	0.81
4	5	0.011	1e+02	4.7	0.1	7	31	97	116	95	120	0.80
5	5	0.028	2.6e+02	3.4	0.7	7	32	126	146	124	150	0.78

Coding Sequence: ATGGTCCAGCTTGTGGAGAGAGGGAGAAGATGGACCAGCTTGTGGAGAGAGGGAGAAGATGAACCAGCTTGTGGAGAGAAGGAGAAGATGGACCGGCTTGTGCGGAGAGGGAGAAGATGGACCAGCTTGTGGAGAGAGGGAGAAGATGGATCAGCTTGTGGGGAGAGGGAGAAGATGGACCGGCTTGTGGAGAGAGGGAGAAGATGGACCGGCTTGTGGAGAGAGGGAGAAGATGGACCAGCTTGTGGGGAGAGGGAGAAAATGGACCGGCTTGTGGAGAGAGGGAGAAAATGGACCAGCTTGTGGGGAGAGGAAGAAGATGGACCGGCTTGTGGAGAGAGGGAGAAGATGGACCAGCTTGTGGGGAGAGGGAGAAAATGGACCGGCTTGTGGGGAGAGGGAGAAAATGGACCAGCTTGTGGGGAGAGGAAGAAGATGGACCGGCTTAACCGCACAAGGGAGCCTGTGTTTCAGTGGGTAGCAATATTGTACAGATTGCGCAAGCAGCCATAA
Protein Sequence: MVQLVERGRRWTSLWREGEDEPACGEKEKMDRLVRRGRRWTSLWREGEDGSACGEREKMDRLVERGRRWTGLWREGEDGPACGEREKMDRLVERGRKWTSLWGEEEDGPACGEREKMDQLVGRGRKWTGLWGEGENGPACGERKKMDRLNRTREPVFQWVAILYRLRKQP*

Sequence clustering based on sequence similarity using MMseqs2