Basic Information

Insect: Timema monikensis
Gene Symbol: Znf711
Assembly: GCA_902151445.1
Location: CABFVZ010000557.1:95325-101724[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0087 1.8 11.3 2.3 1 23 224 246 224 246 0.96

2 9 0.0019 0.38 13.4 0.2 1 23 252 275 252 275 0.87

3 9 0.00048 0.1 15.2 1.2 1 23 481 503 481 503 0.98

4 9 0.00075 0.16 14.6 0.1 1 23 509 531 509 531 0.95

5 9 1.5e-06 0.00031 23.1 0.3 1 20 537 556 537 559 0.93

6 9 0.0006 0.12 14.9 4.1 1 23 565 587 565 587 0.96

7 9 0.032 6.6 9.5 0.4 1 23 593 615 593 615 0.98

8 9 1.1e-06 0.00023 23.5 0.6 1 23 621 643 621 643 0.99

9 9 0.00024 0.05 16.2 0.5 1 23 658 681 658 681 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0087	1.8	11.3	2.3	1	23	224	246	224	246	0.96
2	9	0.0019	0.38	13.4	0.2	1	23	252	275	252	275	0.87
3	9	0.00048	0.1	15.2	1.2	1	23	481	503	481	503	0.98
4	9	0.00075	0.16	14.6	0.1	1	23	509	531	509	531	0.95
5	9	1.5e-06	0.00031	23.1	0.3	1	20	537	556	537	559	0.93
6	9	0.0006	0.12	14.9	4.1	1	23	565	587	565	587	0.96
7	9	0.032	6.6	9.5	0.4	1	23	593	615	593	615	0.98
8	9	1.1e-06	0.00023	23.5	0.6	1	23	621	643	621	643	0.99
9	9	0.00024	0.05	16.2	0.5	1	23	658	681	658	681	0.94

Sequence Information

Coding Sequence: ATgagtgatgatgatagtaataaacaaTCGAAATGTTTAATATGTAATGAAGATATATCTGTGAATACAAGCTATAGTATATTTTACACCGTAATACCACACAGTGGAACCCTTTTAGCAAACTCGATTCAGAAAGTGATTCgtaaaaatgttgataagtCTAGCCTACCCAGTACTTTCATGTGTACAAAGTGCTTTTCCCTTTTTGAGGAATTGGACTACTCTGACGAAAAGTCGACCAAGCTGAGAAAAGAGATCTTAAGCTCTTTCAAAAAAAGCTGCCACAAGAATGGGTACAATATTGACAGTGTTGAAGTTCAAGGTGTAGGATGTCAGACAGAAGTGCTCGCTTCGATGAAAGATGGAAGTAGTGGAGACTCGGAGGATTCAAATGACGTTAAGAGACTTGAGGCTTCCAAGGAAACTGACACATCACAAGAGACAgtgACTGACGATGGGCCCGTCACAGAAGAAGTTGACCAAGTCACTAAGTCCATACCAAACAAACAGGGTAAAAAAAAGACCCACCCTCGGAAAAACGGTAACTCTGACCTCGCAGTCCCAAAAGAACCCCAAGAAAGTCAAGTTCCCGAGAAGCCGAGTGCAGACAGCAAACCCAACGATGCGGAGCCCAAGACTAAGGACGCCCGGCGGAAACGTCGCTACGTCCACCCCTGCCTGCTCTGTGGCCGGCTGTTCCGGCGGCCATGCGAGGTGAAGCAGCACCTCCTGTCTCACGGCGGGGCCAAGCCCTACCAGTGCCAGGAGTGCGGGAAGAGGTTCGGGTCCAAATCGGGAGCGGGGATCCACGCCTTGAAGCAGCACGGCAAGGACATTTCCGCCGAGAACATCATCAACGTGTGCCACGACCCCATGGACACGCTCGAGGTCACCATGGTCGATGGGGACGAAGAGGTGAAGAACGACACCGCCAACAATAACAGTGATAACTTCAGCGGTAGTGAGGACGACGACGACTTTGAGTGGAAAATGGACGATACCGAGTTTGGTTTCAACGAGGGCAAAGATGTGAAACTGGAGGTGTCCGATGGAGATTGTGAAAAGGTGGAAACTGAGCATAACATTGACGACGACGAGGATGACGATGACGATGATGAGGATAATGATGAAGACGAAAATGATGATGGAGATGAGGACACGAAAGATAGTAAAGATGAGGGAGAGATAAAcgaggataaaaaaatatcgcTAGAATCAGTCGTTGTTAAGAAAGAGCTGGAATTTGAGGAGAGGGACATTAAAGAAACACTCAAAGTTCCTCGACTAAAGAATGAACAGAACTCTCATAATTTGAGCGGCTCTTCTCTGCAAATCAACCCGCAAATTCTTCAAGGCCTGTCGAAGAACGAGCTGAAGAACGCCCGGCGCAGGGAGAGGCGTAGGAGGCAGAAGAACGACTCTTTCCCGAAACCGCCCAAGCACAAGTGCGAGATTTGCGGTAAGATGTGGCGCACCACAAGCGAGTACAAGTCTCACATCGCGACCCACAGCGATGAGCGTCCGTTCATCTGTGAGATATGCGGCCAGGCGTACAAACACAAGACTGCGCTAGACGTTCACGTCGGAATGCACAACGGTATAAACCCGTTTAGCTGTCCGTATTGCAACAAGGCGTTCACACAGAAGGGGGCGTTACAGAGACATCTTCCCATACATACGGGCGAGGCACCTTATCAGTGCGAGCTGTGCGGCAAGAGGTTCGTGCACCACACCTCCTTCAACATGCACACCCTCGCACACACAGGCCAGAAAAGCTACAAGTGTGCGGTGTGTGGCCTGGCCCTTTTATCTGGGTCTCACCTCAAGCGCCACTCGCGCGTCCACACAGGGGAGCGCCCCTACCAGTGCCAGACTTGCGGCAAGAGGTTCGCCGAGAGGTACAACCTGGTGGCCCACACGCGGGTCCACGACCCCCTAGCTGGCGGCGGGCGCGAGAGCGCCAAGAAGATGCACAGATGCCAGCTTTGCGGGGCTAGCTTCGACCGCAAACCTAAACTGGAGGACCACATGGCCCTCAGCCACAACAAGATAAACGACGCGGACGACAGCCGCAAGTGGCTGGGGTTCGGCCACCTGTTCAACGCGGCTGACGTTaaccaccatcaccatcaccaggGCATGTCGGGCGTACAAGGCAACTCCCCTCCCCAGCAGTCAACTGCTGCGCCGCCCTCTCAACGGTTACCCCCTCCTCCGGTTCACACCCCACCCGACCACGACATCAACAGCTCCTCCTCCGCACACTCGCATCATCAGCAAGGATGGCATCACATGCTCTTCGGCAACAAGCTGGACAGTGACATGATGGACGGCTCGGACAAACTAATGCTGGAAAGTCAGCACAGGCTGCTCTCAGAGATGTCGGTCCTCGGAGGGATGGGTCCCGCGCACGGGAGGAACATGCTCGCGTCGGGGCTGCACCACTCTTCGCAGGCGCTGCATATACCCGGGGCGCCTAACCCTCACGCCTTACTACAAAGTCGGGTCAACATGTTCTCGCCGGACAATAACTGA
Protein Sequence: MSDDDSNKQSKCLICNEDISVNTSYSIFYTVIPHSGTLLANSIQKVIRKNVDKSSLPSTFMCTKCFSLFEELDYSDEKSTKLRKEILSSFKKSCHKNGYNIDSVEVQGVGCQTEVLASMKDGSSGDSEDSNDVKRLEASKETDTSQETVTDDGPVTEEVDQVTKSIPNKQGKKKTHPRKNGNSDLAVPKEPQESQVPEKPSADSKPNDAEPKTKDARRKRRYVHPCLLCGRLFRRPCEVKQHLLSHGGAKPYQCQECGKRFGSKSGAGIHALKQHGKDISAENIINVCHDPMDTLEVTMVDGDEEVKNDTANNNSDNFSGSEDDDDFEWKMDDTEFGFNEGKDVKLEVSDGDCEKVETEHNIDDDEDDDDDDEDNDEDENDDGDEDTKDSKDEGEINEDKKISLESVVVKKELEFEERDIKETLKVPRLKNEQNSHNLSGSSLQINPQILQGLSKNELKNARRRERRRRQKNDSFPKPPKHKCEICGKMWRTTSEYKSHIATHSDERPFICEICGQAYKHKTALDVHVGMHNGINPFSCPYCNKAFTQKGALQRHLPIHTGEAPYQCELCGKRFVHHTSFNMHTLAHTGQKSYKCAVCGLALLSGSHLKRHSRVHTGERPYQCQTCGKRFAERYNLVAHTRVHDPLAGGGRESAKKMHRCQLCGASFDRKPKLEDHMALSHNKINDADDSRKWLGFGHLFNAADVNHHHHHQGMSGVQGNSPPQQSTAAPPSQRLPPPPVHTPPDHDINSSSSAHSHHQQGWHHMLFGNKLDSDMMDGSDKLMLESQHRLLSEMSVLGGMGPAHGRNMLASGLHHSSQALHIPGAPNPHALLQSRVNMFSPDNN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01445943;
90% Identity: iTF_01445943;
80% Identity: -