Tmon026083.1
Basic Information
- Insect
- Timema monikensis
- Gene Symbol
- ZNF341
- Assembly
- GCA_902151445.1
- Location
- CABFVZ010001122.1:145754-196097[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.9e-05 0.0038 19.7 5.3 2 23 715 736 714 736 0.96 2 12 2.6e-07 5.4e-05 25.5 1.0 1 23 742 764 742 764 0.99 3 12 0.00013 0.027 17.0 1.6 1 23 817 839 817 839 0.98 4 12 0.055 11 8.7 0.7 5 23 924 942 918 942 0.89 5 12 0.00011 0.022 17.3 0.9 1 23 948 970 948 970 0.98 6 12 0.074 15 8.3 0.8 1 23 986 1010 986 1010 0.91 7 12 0.0034 0.7 12.5 3.4 1 23 1012 1034 1012 1034 0.98 8 12 9.8e-07 0.0002 23.7 0.7 1 23 1040 1062 1040 1062 0.98 9 12 0.00061 0.13 14.9 0.7 1 23 1068 1090 1068 1090 0.97 10 12 0.93 1.9e+02 4.9 1.2 2 23 1097 1123 1096 1123 0.89 11 12 0.0053 1.1 11.9 5.4 2 23 1140 1162 1139 1162 0.97 12 12 6 1.2e+03 2.3 0.8 2 19 1168 1185 1167 1185 0.87
Sequence Information
- Coding Sequence
- ATGTCGCAAAGAGATGATGGTAAATCCCTACAGGTTATACTGGTGGGGAGAGGGGAAGTTGGTACATCCCTACAGGTTATACTGGTGGGCAGAGGGGAAGTTGGTACAACCCTACAGGTTATACTGGTGGGGAGAGGGGAAGTTGGTACATCCCTACAGGTTATACTGGTGGGCAGAGGGGAAGTTGGTACATCCCTACAGGTTATACTGGTGGGCAGAGGGGAAGTTGGTACAACCCTACAGGTTATACTGGTGGGCAGAGGGGAAGTTGGTACAACCCTACAGGTTATACTGGTGGGCAGAGGGGAAGTTGGTACAACCCTACAAGTTATACTGGTGGGCAGAGGGGAAGTTGGTACAACCCTACAGGTTATACTGGTGGGCAGAGGGGAAGTTGGTACATTCCTACAGGTTATACTGGTGGGGAGAGGGGAAGTTGATACATTCCTACAGGTTATACTGGTGAGGAGAGGGGAAGTTGGTACATCCCTACAGGTTATACTGGTGGGGAGAGGTTCAATTCCGTACCTACTTGTTCTGGTGGCAGAGTACGATTTAGACACCAAACAACTTTATGTGATAACGGCGTTTTGCAAGATATCCAGGCTGGACTTGAGTCGATTCAACCATAATCCAGACTCAGAACACTGGGCTGCAGTGAAACGCATATTCATATACTTGAAGGGGACCATCGATAGGAAACTTGAGTTCAATGACAAAACAGTTCTAGGAACCTCGGACTGTGTGGGATACTGTAATGCAGATTGTCACACGGTTCAATCTTTGCTAGACTCTCATGGGCTACAAAATGAGGGGCCAGAAACGGTTCTTGGACCCAGTACACTAAAACCAACTCTTACAGACACTTCTATTGGAATAGTTAATGGGTCAAGCCTTCGCTCTTGTTCTATTGGGAAGTCATCAAACCTCATAGAACAGCTTGgTAATTctacaaaagaaaatgttaggaGTCATAGTGAAGAGGTGGAAAGTTTGAACATTCATTCAGGAAGACAAAGCCCAGGAGAATACCCGCAGCTGCAGATACATGCACTGGATACCGACTCGTCAGAGCTTGGACAACCGGTCATTCTCAGCGATTCGGACATTCTTTCTTTCAGTATTGAACAGGCTGCGTTGAACATTGACAATACATCACAGgtTCTGCCTTCTCTCACAAATGTTATTCAAGCTGGTAACTATTTGTCCTCACCTGTTTGCCCGTCATCTAATCTGAGGTCTTTAAATTGTTCCAATGCCAACGCTATTTCATTTGGGCAGCCCATTATTCTCACCTCCTCACAGCTGACACCCACCTTCCTGACATCTCCGCTGTCGAGTTTCCAGTCCATATCCGACGACAAGTTGGACCCAGAATTAGACAAGAAAGATTTGTCCTCACCTCGCAGCATAAACCTATTAACACCGACATTTCCCAGCTCATTTTTGAAGAACTGCAGGTTTATATTGCCCAATTTGGGGAGTGGCAGTTCCACACCTGATTCCACTAGGACCTTATTGTTGGATAATTCAGACAAAGTTGTAACGGGCAAAGTGTTGTACACAGAGAGTTGCTCTACAAATGGACAAACGGTTTTGCTTGACTATGTTGATAAAATTACTCAGAGGACATCTTTGTCTGGTTCCGAGTTCACTCCTGGTGCAAGTATAGAATGCACAGACAGTGGTGTGGAGCTCTCAAGCGGGGCCGAAGGCCAAGACCATCTATCAGAGTATTCGGAGGTGCGCGAAGGTGACTCTCTTACCAACATATTTATGGACGTGGGCAAAAATCACCCCATCACTCTTGCCGTTAGCGAGTTTCAACCGGTCATGTGTATAGCCAATTCTAAAGTCTCGACATTATCTTCAACGGATGGCAACTCGTCTATGGCCAGCCAACCAAAGCTCATGGGGGAGGACTCTCACCCCACCATGCTCTCTCTGTCGGAATCACCCTCTCATCCTGATATTATCAATTTGGCCGACACGAATGTCATACCGGAGTCTTTATCATATGGTCAACCGCTCGTCATATCCACAGCAGACACTCAACTTGGGACTACATCACAACCAGAGATTGATGACCCATCTAgaataaagagagaaaaggaAAATCAATCATCTCGAAAACAAAAGTTACATTGTGAGCATTGTGGTAAAAAGTTTGCCAAGAATTTTGACCTGAAGCAGCACATGCGCAGTCATACAGGGGAAAAACCTTTCCAATGTGTTGTGTGCGGCAGGGCCTTCTCGCAGAAATCCAACGTCAAGAAACACATGACCACACATAAGGTTTGGCCAGATGGCTTATCACGGACATTACCTAAAGAGCCATTTCAAAAAGTGGCAGTGAATgctgatgatgatagtgatacAATCAATCAAAGTGAGGAAACGGTTGACGGTGGTAAAATAACCGAAACTGAGTGTTTGGTGGACAAGTCATTTGTTTGCCAATATTGCTCTGCTGTCTTCAGCTCCTACTTTACTCTTAAAACGCATATGAAAGAGCATTCACATCAAAAAAGGTTTTTGGTGAAGCGCAGAATTCCGGTGTTGGAACATCCACCTTACTCACTTGATCTAGCCCCGTGTGACTTTTTTCTGTTCCCAAAGGTCAAGACTGCACTAAAAGGAACCTGTTTCGAGTCTGTTGATGCTGTGAAGGAAAAAGCTACAAAGCTCATGAACAGCCTCTCAGAAAAGGACCGGAAACATTGCTTCCAACAGTGGATGATTTGTATGGTTTACAGGTGTATCCAGAGGAATTGCAACAAGATGTTTACTGACCTGGACTCGTTTGTAGAACATACACAGCTCCACTCTGCGGAAGTGGAGTATCGCTGCCACGTGTGTAGTAAGGTTTTTACCAATTTAGCAGAACTGGGTCTGCATCAATACGTGCACACCCCGGCTAGCGGAACTAAATCTCGCAAGATGAATTGCAGATATTTTCGCTGTGTGAAGTGCAAGAGTCAGTTTGTAAACCCAGAAGCTCTGGACCACCATCTCGCAACATCTACGCACAACTACTCCTGCACGTCATGTGGCAAAGTGTTTACTTGTGAGCGCTACCTTCGAAGGCACCTGGTGACACACAGAACAGCTGAGCCATTCAAATGCCCGGACTGTGGGAAAGGTTTCAAGACTGAGACTTACCTCAATACTCACAGACTCATTCATGGCAGTGAGAAACCTTACAAATGTCAGTACTGTAATGCTGCATTCATTCGTAAGGATAAGATGGTGCGACATTCTTTAATCCATCAGACCGTGAAGAAGCTCAAGTGTCCTTTCCGCACACATTTGGGCTGTATGCGTGAGTTCAACAGAGGAGATAAATTGAAGCTACATATTCTGACACACAGCTCAGTGAAACCAAACCAGTGTCGCAAGTGTCAAGTAAAACCAAACCAGTGTCGCAAGTGTCATCGTTCCTTCTCCAAGATGACCCTCCTTCGTCAGCATGAGCGCACACAACACATTTCATATGTGCACACATGCATTAGCTGTGGCACGagtttTCCAAAGAAGAATCAAATTCGTACCCATGACTGCTCTCAAGCTCGAACGTACCGTACAAAAAGCGAAAAGCAGCCATCGGATACTAAATGCAGAAGGAAAACTCGTGGCAGACATTCAATCAGAATCAAACAAATTGAAGAAATTAATAAGCTCAATGATATCGACAACATCCCTACCATTGAAATTATTGTTGTCCCAGCACCAGAAGGTAGCAGTGTACCCCAAAGTTTAGACGGGGAAGAATTGTACGAGGTCATGTTCCAAAGTAAGCCAGAGAACTCCCAAAACACAGAGCTTACTCCCGAGAAAAATACAGTACTTGTAGCGCAgtcattttatgaaaactag
- Protein Sequence
- MSQRDDGKSLQVILVGRGEVGTSLQVILVGRGEVGTTLQVILVGRGEVGTSLQVILVGRGEVGTSLQVILVGRGEVGTTLQVILVGRGEVGTTLQVILVGRGEVGTTLQVILVGRGEVGTTLQVILVGRGEVGTFLQVILVGRGEVDTFLQVILVRRGEVGTSLQVILVGRGSIPYLLVLVAEYDLDTKQLYVITAFCKISRLDLSRFNHNPDSEHWAAVKRIFIYLKGTIDRKLEFNDKTVLGTSDCVGYCNADCHTVQSLLDSHGLQNEGPETVLGPSTLKPTLTDTSIGIVNGSSLRSCSIGKSSNLIEQLGNSTKENVRSHSEEVESLNIHSGRQSPGEYPQLQIHALDTDSSELGQPVILSDSDILSFSIEQAALNIDNTSQVLPSLTNVIQAGNYLSSPVCPSSNLRSLNCSNANAISFGQPIILTSSQLTPTFLTSPLSSFQSISDDKLDPELDKKDLSSPRSINLLTPTFPSSFLKNCRFILPNLGSGSSTPDSTRTLLLDNSDKVVTGKVLYTESCSTNGQTVLLDYVDKITQRTSLSGSEFTPGASIECTDSGVELSSGAEGQDHLSEYSEVREGDSLTNIFMDVGKNHPITLAVSEFQPVMCIANSKVSTLSSTDGNSSMASQPKLMGEDSHPTMLSLSESPSHPDIINLADTNVIPESLSYGQPLVISTADTQLGTTSQPEIDDPSRIKREKENQSSRKQKLHCEHCGKKFAKNFDLKQHMRSHTGEKPFQCVVCGRAFSQKSNVKKHMTTHKVWPDGLSRTLPKEPFQKVAVNADDDSDTINQSEETVDGGKITETECLVDKSFVCQYCSAVFSSYFTLKTHMKEHSHQKRFLVKRRIPVLEHPPYSLDLAPCDFFLFPKVKTALKGTCFESVDAVKEKATKLMNSLSEKDRKHCFQQWMICMVYRCIQRNCNKMFTDLDSFVEHTQLHSAEVEYRCHVCSKVFTNLAELGLHQYVHTPASGTKSRKMNCRYFRCVKCKSQFVNPEALDHHLATSTHNYSCTSCGKVFTCERYLRRHLVTHRTAEPFKCPDCGKGFKTETYLNTHRLIHGSEKPYKCQYCNAAFIRKDKMVRHSLIHQTVKKLKCPFRTHLGCMREFNRGDKLKLHILTHSSVKPNQCRKCQVKPNQCRKCHRSFSKMTLLRQHERTQHISYVHTCISCGTSFPKKNQIRTHDCSQARTYRTKSEKQPSDTKCRRKTRGRHSIRIKQIEEINKLNDIDNIPTIEIIVVPAPEGSSVPQSLDGEELYEVMFQSKPENSQNTELTPEKNTVLVAQSFYEN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01450905;
- 90% Identity
- -
- 80% Identity
- -