Tmon002674.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Timema monikensis
Gene Symbol
Znf296
Assembly
GCA_902151445.1
Location
CABFVZ010000054.1:684413-691550[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 0.0073 1.5 11.5 0.7 2 23 46 68 45 68 0.94
2 30 0.0009 0.19 14.3 7.5 3 23 72 92 71 92 0.98
3 30 0.044 9 9.1 0.6 2 23 99 120 98 120 0.96
4 30 0.078 16 8.3 0.3 1 23 126 148 126 148 0.96
5 30 1e-06 0.00022 23.6 3.1 1 23 154 176 154 176 0.99
6 30 4.1e-06 0.00084 21.7 0.3 1 23 181 203 181 203 0.99
7 30 0.0001 0.021 17.4 4.4 1 23 209 231 209 231 0.97
8 30 2.9e-06 0.00059 22.2 2.4 1 23 237 259 237 259 0.96
9 30 1e-05 0.0022 20.4 6.5 1 23 265 287 265 287 0.98
10 30 0.061 13 8.6 5.0 1 23 362 385 362 385 0.93
11 30 0.0045 0.92 12.2 2.7 1 23 389 411 389 411 0.93
12 30 0.9 1.9e+02 4.9 0.8 2 23 418 439 418 439 0.95
13 30 0.0035 0.72 12.5 0.3 1 23 445 467 445 467 0.95
14 30 0.00022 0.046 16.3 4.7 1 23 473 495 473 495 0.99
15 30 0.0034 0.7 12.5 1.4 1 23 506 528 506 528 0.98
16 30 0.00033 0.067 15.7 1.2 1 23 535 557 535 557 0.97
17 30 1.6e-06 0.00033 23.0 0.3 2 23 564 585 564 585 0.97
18 30 1.1e-07 2.2e-05 26.7 1.5 1 23 591 613 591 613 0.98
19 30 0.00013 0.027 17.0 0.8 1 21 619 639 619 640 0.96
20 30 0.025 5.1 9.8 3.2 2 23 693 713 692 713 0.88
21 30 5.1e-05 0.01 18.3 0.0 1 23 719 741 719 741 0.97
22 30 9.2e-05 0.019 17.5 3.0 1 23 747 769 747 769 0.97
23 30 0.00012 0.024 17.2 3.5 1 23 775 797 775 797 0.97
24 30 0.00018 0.037 16.6 0.5 2 23 804 825 803 825 0.95
25 30 0.00087 0.18 14.4 2.7 1 23 831 853 831 853 0.98
26 30 1.4e-05 0.0028 20.1 1.4 1 23 864 886 864 886 0.98
27 30 1.2e-05 0.0024 20.3 0.5 2 23 893 914 892 914 0.96
28 30 5.3e-06 0.0011 21.4 0.5 2 23 921 942 921 942 0.97
29 30 2.2e-06 0.00046 22.6 2.5 1 23 948 970 948 970 0.99
30 30 0.00038 0.079 15.5 4.1 1 23 975 997 975 997 0.97

Sequence Information

Coding Sequence
ATGAAGCAGAACTCTAAATCTGCTGCTAAAGTGCCCAAAGGGGACATTAAATCTCTTTCTGGAAGTTTAGCAGTAGAATTTGGACATTGCGACAAGAATGAGAAACAGTCGTCACCTGGTGATGATAAAATATCGACGTGTTCCATGTGCAAAGAATGGTTCACACGCCCAAGACAGCTGCAGCTGCATATGGGTAAGATGCATAAAAATGCATGCGAAGTGTGTCACAAAGTGTTTAGTCGGAAACATCAGCTCCACTACCATAGgaagtcacattttaaaaacaagagttTGATTTGTGATATTTGTGGCTACGCGACTTATCTAAAGCGTTTCTTCGAGTCTCATAGGAGAAGACATTTTGGCGACTACACATTCAAATGTGACCAATGTACCTCCGGGTTCTTCTCAAATGCGGAGCTCTTGGAACACAAGGTGGTCCACACCGGCGTGCGGCCATACCAATGCGAGTTATGTGGCAAGACCTTCAGTAAGCGCCGTTATCTCTCTACGCACATGCGTTACCATGATAGTAACACATACGTGTGTGACATTTGCGGAAAGTCCATCACTCAGAAGAACTATTTAATAATCCACCTGCGGAGACACATGGGAGACAAACGGCACATCTGTGACTTTTGCGGAAAGGCATTCTGCTCGTCAAACTACCTGAGACTCCACCGCCGCGTTCATACGGGGGAGAAACCTCACAATTGCTCTTACTGCGGCAAGGGCTTCGCCCAGCGCTCGGCGCTCAACGTTCACATCAGGCACCACACGGGAGAGAAGCCCCACAAGTGCGATACCTGCGGCAAGTGTTTCTCACAGCGCTCGGCGCTCAATGTCCACGTGAGGCATCACACGGGGGAGAAGCCCTTTGTTTGTGCTCTGTGCAGCCAGAGGTTCATAGCCTTTCTAGACGATTATACACGCCTCGGTAGAAATAATAGCATCACAAAGGAAGAGAAGCCAAAAGGGTCAGTAAAAGTGATAAATCTTGCCTCCGAATCAAACTTTGGCAAGAAGATTCCTTCAAAGCGAGTTGCCTTGGAAACTTTCAAGTCACGGAAGCAGGAAAGAACATTCTCATGCACAGGCTGCAGTAAGAAGTTTGTACGGGAACACAAATTGCGCTGCCACATGGACAATGTGCACAACAAGGTTCACAAGTGTACGGTTTGCGGGCAGACGTTTGAGAAAGCGCACCAACTGAGCTATCACAGCGTGGTGCAcaaaaaatctaaaacagaAGTATGTGACATTTGTGGTTATACCGCATATTACAGGTGTGTGATAGAGAATCATAAGAGGACACATTTCTGGGGGAATGAGTTCAGTTGCGATTTGTGCCAGAGAAGTTTTCAGGGTGCATATGCCCTTATGAAACATAAAGTGGTTCACACCGACGTGAAGCAATACCAGTGCGACTTGTGCGGCCGACTATATGTTCACAAGTGTAATCTGACCGCGCATAGAAAGACCCATGTCTCGGGATACAAACGTCCCACGGATGGTCACCAGTGTGAGGTCTGTGGGAGAAAGTTCTTGGCGAAGAACTCTCTGGTGAAGCACGTGAGATCTCATGTCGGTCAGAAACGTTGGTACAAGTGTGACGTATGTGGCAAGGACCTGTCGACGCGGGAGTCACTCCAGGTTCACTGCAGAATCCACACCGGCGAGAAGCCGGAGGTTTGCAACTACTGCGGGAAGACATTCAGTTCCCGTGTTGGGTTGAAACTTCACGTTCGCGTTCATACCGGGGAGAAACCGTTCACTTGTAAGGAGTGCGGGAAGAGCTTCACTCAACAGTCAACTCTTATAGTCCACAAGAGACTCCATACGGGACAGCGTCCATACGAGTGTTTGAAATGTGATAAGAGGTTCATAACCAAGACAATGATGAACAATCACATGAAGCTGTCTCTTCTTTCCAGATGTGCAGATTTAATCCAAACAGATTCTGCAAATAAGTTGAAACGCAAGTCAACTCACAACAGTAAAGAGAAAAGAGTGAACAGTAAAGAGAAAAGAGTGAACAGTATAGAGAAAAGACTGAGGAGCGATCTTAGTTCCAACAAATGCGACTTTTGTGGTAAAGAGTTCACCCGGCATAAGATGTTGATTCACCGCAGGATCCATACCGGTGAGCGTCCGTTTGTCTGCTCATCGTGCGGGGAGGCGTTTGTGTCGAAAGGCGCTCTGACTGTTCACATGGTGATACACAGTGATGAGCGTCCCTTTTCCTGCAAGATCTGCCACCGAGCTTTCAAGCGGGCGTTTGAGTTGAAAGACCACAACAAAATACACACTGGGGAGAAGAACCACATCTGCGACATCTGCGGTTATTCGTGCATTCAGAGGACTAACCTCGTAAACCACCGCAGGAGACATTTGTTTGAGTACAAGCTGAGTTGTGACATTTGCAGCAAAGGGTTCTACACAAAGACGGAACTGCAGGAGCATAGGAACGGGCATACGGGAGAAAAACCATTTCAATGCGACACGTGTGGTGTTTCGTATCGCTATCGGTACCGGCTGACTGTCCACAAGAAGAAACACGAGGCAGGCTACATTCCTCCAGAGAAGGCGTACAAGTGTGAGATATGTAACAAGACGTATTCTCGTAAGCAGGTGTTGCTCCTGCACATGAAGTTGCACACCGGGGAAAGTCAATGCATATGTGACATCTGTGGCAAGGCGGTTTCGAGCCGGGACTACCTTAAGATACACGTCCGGACGCACACCGGTGAAAAACCAAATGTTTGCGATGTCTGTGGTAAAGCGTTcatttcaaaaaagtatctcaaGATCCATTTCCGCACTCACACGGGTGAGCGCCCGTACACTTGTGAGTTCTGCAGTAAGAAGTTCACTCAACAGTCTTCCTTGATTGTTCACAGGAGATCTCACATAGAAAGGATTCATGTGTGTCACATATGCAAGAAGTCTTTTACCACAAAGGCATTCTTAGGGATGCACTTGAAAGAACATAACACAGTTTACTAA
Protein Sequence
MKQNSKSAAKVPKGDIKSLSGSLAVEFGHCDKNEKQSSPGDDKISTCSMCKEWFTRPRQLQLHMGKMHKNACEVCHKVFSRKHQLHYHRKSHFKNKSLICDICGYATYLKRFFESHRRRHFGDYTFKCDQCTSGFFSNAELLEHKVVHTGVRPYQCELCGKTFSKRRYLSTHMRYHDSNTYVCDICGKSITQKNYLIIHLRRHMGDKRHICDFCGKAFCSSNYLRLHRRVHTGEKPHNCSYCGKGFAQRSALNVHIRHHTGEKPHKCDTCGKCFSQRSALNVHVRHHTGEKPFVCALCSQRFIAFLDDYTRLGRNNSITKEEKPKGSVKVINLASESNFGKKIPSKRVALETFKSRKQERTFSCTGCSKKFVREHKLRCHMDNVHNKVHKCTVCGQTFEKAHQLSYHSVVHKKSKTEVCDICGYTAYYRCVIENHKRTHFWGNEFSCDLCQRSFQGAYALMKHKVVHTDVKQYQCDLCGRLYVHKCNLTAHRKTHVSGYKRPTDGHQCEVCGRKFLAKNSLVKHVRSHVGQKRWYKCDVCGKDLSTRESLQVHCRIHTGEKPEVCNYCGKTFSSRVGLKLHVRVHTGEKPFTCKECGKSFTQQSTLIVHKRLHTGQRPYECLKCDKRFITKTMMNNHMKLSLLSRCADLIQTDSANKLKRKSTHNSKEKRVNSKEKRVNSIEKRLRSDLSSNKCDFCGKEFTRHKMLIHRRIHTGERPFVCSSCGEAFVSKGALTVHMVIHSDERPFSCKICHRAFKRAFELKDHNKIHTGEKNHICDICGYSCIQRTNLVNHRRRHLFEYKLSCDICSKGFYTKTELQEHRNGHTGEKPFQCDTCGVSYRYRYRLTVHKKKHEAGYIPPEKAYKCEICNKTYSRKQVLLLHMKLHTGESQCICDICGKAVSSRDYLKIHVRTHTGEKPNVCDVCGKAFISKKYLKIHFRTHTGERPYTCEFCSKKFTQQSSLIVHRRSHIERIHVCHICKKSFTTKAFLGMHLKEHNTVY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-