Tmon002690.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Timema monikensis
Gene Symbol
-
Assembly
GCA_902151445.1
Location
CABFVZ010000054.1:761746-779897[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 54 0.00014 0.029 16.9 4.5 2 20 27 45 26 48 0.94
2 54 0.018 3.7 10.3 4.6 1 23 54 76 54 76 0.98
3 54 0.0059 1.2 11.8 2.7 1 23 82 104 82 104 0.99
4 54 0.0013 0.27 13.9 0.8 2 23 111 132 110 132 0.96
5 54 0.00046 0.095 15.3 2.3 1 23 138 160 138 160 0.96
6 54 0.44 90 5.9 6.8 1 23 171 193 171 193 0.96
7 54 0.00049 0.1 15.2 0.0 1 23 199 221 199 221 0.98
8 54 2.5e-05 0.0051 19.3 0.1 1 23 227 249 227 249 0.97
9 54 1.7e-06 0.00036 22.9 2.3 3 23 257 277 255 277 0.97
10 54 3.8e-06 0.00078 21.8 1.2 2 23 321 342 320 342 0.96
11 54 0.0004 0.082 15.5 5.6 1 23 348 370 348 370 0.95
12 54 0.0001 0.021 17.3 4.5 1 23 376 398 376 398 0.98
13 54 0.82 1.7e+02 5.1 7.7 1 23 404 426 404 426 0.96
14 54 0.0014 0.29 13.8 1.6 1 23 432 454 432 454 0.96
15 54 0.0056 1.1 11.9 6.5 1 23 465 487 465 487 0.98
16 54 0.0037 0.76 12.4 0.3 1 23 493 515 493 515 0.96
17 54 1.4e-06 0.0003 23.2 0.1 1 23 521 543 521 543 0.99
18 54 2.2e-06 0.00045 22.6 3.1 3 23 551 571 550 571 0.99
19 54 2.3 4.8e+02 3.6 1.0 1 13 577 589 577 591 0.91
20 54 8.4e-07 0.00017 23.9 0.9 2 23 594 615 593 615 0.96
21 54 0.00042 0.086 15.4 1.2 1 23 621 643 621 643 0.98
22 54 0.00028 0.059 15.9 3.9 1 23 649 671 649 671 0.98
23 54 0.0039 0.8 12.4 2.3 1 23 677 699 677 699 0.97
24 54 0.0035 0.72 12.5 2.6 3 23 707 727 705 727 0.95
25 54 0.5 1e+02 5.7 6.0 1 23 738 760 738 760 0.95
26 54 0.00037 0.077 15.6 0.2 2 23 767 788 766 788 0.97
27 54 1.9e-05 0.0039 19.6 0.6 1 23 794 816 794 816 0.98
28 54 1.7e-05 0.0034 19.8 2.1 1 23 822 844 822 844 0.95
29 54 2.5e-05 0.0051 19.3 4.1 1 23 872 894 872 894 0.97
30 54 0.00058 0.12 15.0 1.6 1 23 928 950 928 950 0.97
31 54 0.00071 0.15 14.7 1.1 1 23 956 978 956 978 0.98
32 54 7.6e-08 1.6e-05 27.2 1.6 1 23 988 1010 988 1010 0.97
33 54 5.3e-05 0.011 18.2 0.1 2 23 1017 1038 1016 1038 0.97
34 54 5.3e-06 0.0011 21.4 1.5 1 23 1044 1066 1044 1066 0.98
35 54 4.8e-06 0.001 21.5 4.3 1 23 1072 1094 1072 1094 0.97
36 54 3.9e-05 0.0079 18.7 2.1 1 23 1160 1182 1160 1182 0.98
37 54 1.4e-06 0.0003 23.2 2.9 1 23 1188 1210 1188 1210 0.98
38 54 0.0017 0.36 13.5 2.5 1 23 1216 1238 1216 1238 0.98
39 54 0.0021 0.43 13.2 0.2 2 23 1245 1266 1244 1266 0.96
40 54 0.035 7.2 9.4 3.8 1 23 1274 1296 1274 1296 0.98
41 54 0.0031 0.65 12.7 6.3 1 23 1306 1328 1306 1328 0.97
42 54 0.0085 1.7 11.3 0.3 2 23 1335 1356 1334 1356 0.97
43 54 6.7e-05 0.014 17.9 0.2 1 23 1362 1384 1362 1384 0.98
44 54 4.9e-05 0.01 18.3 0.9 1 22 1390 1411 1390 1411 0.96
45 54 0.00076 0.16 14.6 3.0 1 23 1490 1512 1490 1512 0.98
46 54 0.00061 0.13 14.9 2.8 1 23 1518 1541 1518 1541 0.97
47 54 0.58 1.2e+02 5.5 5.0 2 21 1548 1567 1547 1569 0.91
48 54 4.7e-05 0.0097 18.4 0.8 1 23 1575 1598 1575 1598 0.98
49 54 0.00011 0.022 17.3 1.8 1 23 1603 1625 1603 1625 0.99
50 54 0.017 3.5 10.3 1.9 1 23 1635 1657 1635 1657 0.97
51 54 0.00023 0.047 16.2 1.0 1 23 1663 1685 1663 1685 0.98
52 54 8.9e-06 0.0018 20.7 0.7 2 23 1692 1713 1691 1713 0.97
53 54 0.00012 0.025 17.1 4.7 1 23 1719 1741 1719 1741 0.98
54 54 0.00021 0.044 16.3 0.3 1 23 1747 1769 1747 1769 0.98

Sequence Information

Coding Sequence
ATGATTTCGCCAAAATCGCTATCTAGTCCTTTAGAACTTATGGAATTGGAGTGGGGGAGTGCAGAGAACCCCAAAtggaaatgtaaaatatgtgacAAAGTGTTCAAACATAAATGTTCGCTGAAGAACCACATGCCGCTTCATAACACCGAGGGTTCTTTCAAATGCGACATCTGCCATAAGCTTCTCAAATCAGATTATCAGTTGACTCGTCATAAAAAGAACCACAGCCAACTGAAAGACTACAAATGCGGCATCTGCGGCTACGAGACGTGTTCCAACAGTAAAATCGAGAGCCATAAGAGGAGACATCTGAATGAGTACAAAGTGAAGTGTGAGCTGTGTAATAAAGGTTTCTACACCTCACGGGAGTTCCAGGAGCACACCATGCTCCACACAGGAGATAGGCCCCACTCCTGCGAGGTCTGCGGCAAGTCCTACCCCAACAAATACCGGCTGACAGACCACAAGAAGCTGCACGAGCCCAACTACGAGGAGATGTTCCTCAGGTTCAAGTGCCGGTTCTGTGACAAGGGCTTCCCCCGGCGAAGCTCTTGCGTTCGTCACGAGAAGCACCACCTGGGCGTCCGGGAATACGCCTGCGATGTGTGCGGCAAGGCGCTCAGTTCGGGACCTCTCCTGAAGCTCCACATGCGCATCCATACGGGGGAGAAACCATTTGCCTGCGACGTGTGCGGTAAATCGTTTGGGCGCGTGTATGCCCTGACCATGCATTACCGTGTCCACACCGGTGAGCGCCCGTACGGTTGCTCTGAGTGTGGGAAGAGGTTCACACAACATTCGAGTCTAACAATACACATGCGCTATCATACGGGGCAGAAGCCGTACACAAGTGATAAGAATTGGTTTGTAGTAGTGAAATCAGAAGACAAATCAACTTGCCCCCAGAACACAGGGAAAACAGATCCCCTTGAAGTAAACAAATTGCGGAATGAGATAAAGTGTGAAATATGCGACAAGATATACAAACGCCGCAGCACGTTACAGAGGCACATGTTCCTTCACGACGGTGCTCTTTCCCACGACTGTGTCGTGTGTCACAAAACCTTCAGGTCCGAGTGGCACTTGAAACAACACATGAAGGCTCACACCAGAGAAAAGAACTTCAAATGTGATATCTGCGGCTTTCAGTTCAGTCACAACTACACACTAGAAAACCATAAAAAGAGACATTCAAACAGTTACAGGCACAACTGCAACCTTTGCGGTCACGGATTTCACAGCAACCACGAGTTCTTAGTGCATAAGAAGGTTCACACTGGCGAGAGGCCATATTGTTGCGAGGTTTGTGGAAAGTCTTATCCCAACAAGTACAGGCTTGTCGACCATAAAACGATTCATCGACCTGACTATGAAGAGACATTTCTTCGTTTCAAATGTAAGCTTTGCGGTAAAGGTTTCCGTCAACAGAGTCATTGCGCGACCCATGAGAAGCGTCATCTCGGGCAGAAGGATCACATGTGCGAAATTTGCGGCCGAGCTGTCAACTCCCCGACTGAGTTAAAGTTCCACATGCGTGGTCACACTGGCGAGAAGCCATACGTTTGCCCTTACTGCGATAAGGCGTTTATCCGGCTGATGGCTCTCAAGATACATCTGCGCGTCCATACGGGAGAGCGCCCACACGGCTGTGACCACTGTGACAAGAGGTTCACGCAACGCTCTAGTCTCACTATACATATGCGATATCACACTGGGGTCAGACCGTACAAGTGTGACACATGTTCAAAAACGTTGAGCACATCGAAACGAGtaataaagtgtaaaatatgtGGCAAAATGTACAAACGCAACAGCACGCTCCGGAACCATATGGTCGTCCATGACAACAGTCACTCCTACGTGTGCGACATCTGTCAGAAGGAACTGAAGTCAGAATGGCATTTGAAGCAGCACGTCAAGAGTCACATGAGGGAGAAGAAATTCAAGTGTGATATCTGCGGGTTCCAGTTCGGTCATAAATACAGTTTAGAGAACCACAAAAAGAGGCATTTGAAAGATTACCGACACAGATGTGAGATATGCAACCGAGGATTTTACAGTAACAACGAATTTCTCGAACATAAAAAGGTGCACACGGGTGAAAGGCCACATCTCTGTGAGATCTGTAACAAGTCTTATCCAAATAAATACAGACTGATCTATCATAAAAAGATGCATGAGCCCGACTATGAGGAGATGTTTCTACGGTTCAAGTGTAAGTTCTGCGAGAAAGGTTTCCGACAGCGTAGCAAGTGTGTCCTCCACGAGAAGCGGCATGTCGGACAGAAGGAGCTGGTGTGCGACGTTTGCGGTCAGGCTCTTCACACTCCGACCGAGTTGAAACTTCACATGCGCATGCACACCGGCGAGAAACCTTTCATCTGCAACTATTGCGCCAAGGCGTTCAGTCGACTGACGTCTCTTACCATGCATCTCCGCATCCACACGGGTGAACGGCCGTACCCTTGTATCGAGTGTGGGAAGAGGTTCACACAGTGTTCCAGTCTAACGATACACATGCGATACCATACGGGTTTGAGACCTTTCGAATGGTTCCTTTACAACTCCATGTTGGGGAGCCATCTGTTGAGCCACACGGAAACCAGACCCTATTCGTGCCATGTTTGTGGAAAGAAGTTCAAACGCAAATACGAGGTACGGAAACACGCAAAGTTGCACGCGTTTGAGCGGGATTACGTGTGCGACCTGTGCAACTATTCGACCAACTGCAAGCATAACTTTGGCATCCACCGCAAGAGACATTTTAAGCAATGTGAGTTCCGATGTGATGTTTGTCAAAAGGGTTGCTATTCTAAAGGAGAGCTACAAAAACACACCGCTGTTCATGTGGAAGGTAAACCTTACTCATGTGAAGTTTGTGGATTGTCCTACTCATACAAGAACAATTTATCTTTCCACATAAGGAAACATGAACCATCCTATAACCCTAGTAAAGACTACCAGTGTGAAATCTGCGGAAAAACGTTCACCAACCGCAGCAACCTGACGAGCCATGTCAAATTTCATCTCGGCAAGAACAAGGTGGTGTGCGACATGTGTGGCAAGAGCCTGTCGAGCGGAGAGAGCCTTAAGACGCACATGCGCGTCCATACGGGGGAGAAACCGTTCTCATGCAGCACGTGCGGTAAGGCGTTCAAGGACAAGGGCTACCTGAGGACTCACAGACTGTCTCATACGGGGGAAAAGCCGCACACCTGCGATCAGTGCGGGAAGTCCTTCACTCAGCGCTCAACACTCACTGTTCACAAACGTTACCATTCTGGAGAGCGACCGTTGTCACATTCTTACACGAGTATCAACAAAAGAAACACGAAGGCGGTCAAACAAGAGAAacagaagaagaaaattaaaaaatacggGATACTGGCGAAAATTCTGCAATTGAAAGACGAGCATACATCTGCAAATTCCTTTTACGATTCCAGCTCTAAATACGTGTTGCCAACCGGCGGTTTTCGCTGTGATATTTGTGAGAAATGCTATGCAAGGGAGGGGCAATTAAACAAGCACAAGATCACACACAGCGAATCCCGCCCTTTCCACTGCTCCATTTGCCCCAAAACATTCAAACGCAAGTATGAACTCAACACGCACATACAGATTCACAACAAGGAAGGCAGGTATTCATGTGATGTGTGCAAGTACTCGACGATGAAGAAATCTAATCTGACTCTTCACAGACAACGACACTTCAATCAGTATAATATCAAGTGCGAGGTTTGCGGGAAAGGTTACTACACCAATTATGAAATGAGGCTCCATAAAGCTGTCCACATTCACGGGGAAACAAAACCTTTTGTTTGTGACGTGTGCGATAAACAATTCTATTGCGAGTACAACCTAAATCTGCACAAGAAAAGACACAACTCTGACCAGCAATCAAAGGAGAAATTCACATGCGAACACTGTGGGAAAAAGTTGCATTCGCGCTCCGAACTAACGAGGCATTCCAAATATCACTCGGGTAACTTTCAGGTGGTGTGCGACATCTGCGGTAAGTGCCTCTCCGGGACAAATGTGCTGCAAATCCACCGCAGGATTCACACAGGCGAGAAGCCGTTTGTTTGCGACATGTGCGGGAAAGCGTTCAGTGCCTTGAGCTACCTCGTGCTCCACAAACGCTCGCACACGGGAGAGAAGCCATTTCCTTGCGGGAAGTGTGGGAAATGTTTCGCCCAACGGTCAAGCCGCACCATTCACATGAGggtggcaaatatattgaataCTGCCCCTGAAGGAGTTACAGGGCGTGGAAACGTTTTGTGGGTGATTATGCCCAACTCCCAGATGCACAACCATGAACACAAAGAACTTTCATCAGTACAAAATGAAAAGAGTAAATTTGTTCTAGACAAACACACAGATTTGTTCGAACGAAAACGCCCAGCCCATAATATTTCTCATGAAAAATCTAGAACTAAAAAACTACTCCAGTCGAGTGAATTCAAGTGCCCGATTTGTGGGAAAGTTTGTGAAGCAAAACATCGCTTAAAGTATCACATAATGAGCCACGATGAGTCTCGCCCGTACAAATGTGACGTGTGTGACAAAGATTTCAAAAACATGTGGCACGTGAAGAAACACAAGAATATAACTCACTTGGGAGTAAAAAattgtgtatgtaaaatttgCGGCTATGCCTCATTTTATCGATCGCAGTTAAAGCAACATGAAAAATGTCACGGTGGTACATTCAAGTACAAATGCGAACTTTGTGAGAAATCTTTCCCGGACAAGACAGGGTTCCAAGCACATCGAATAACTTTCCATGGTGAAGAGCCTTATAAATGTGCCGAATGCGGCAAAACATACTCCAAGAAACGGACGTTGGACGATCATACAAAATCTCACATTCCTGGTTATAAGCCTGTCATGAAGCATCAGTGCGAACTTTGTGGGAAGACATTTCTAAGAATAAACGAACTCTATGTCCACAACCGGCGGCACAGTGTGGATAAAACTCACACCTGCCTATTGTGTGATAAACCGTTGTCATCGCCCCAGTCATTGAAGTACCACATGCGGATCCATACAGGAGAGAAGCCGCTAGTTTGCGATACGTGCGGGAAATCTTTCAGAACCACCCAACTTCTCAGGGTTCACCGGAGGGTACACACGGGGGAAAAGCCGTATTCTTGCGACCTCTGTTCCAAGTCCTTCTCGCAGTGCTCGACTTTGACTGTCCATAAACGCTACCACACAGGGCAGAGACCTTATATTTGTCAGGTTTGCAACCTTAGCTTTGTCACAAGGACGTTGTTAAATATTCATACCAACATTCATAAAAAATGA
Protein Sequence
MISPKSLSSPLELMELEWGSAENPKWKCKICDKVFKHKCSLKNHMPLHNTEGSFKCDICHKLLKSDYQLTRHKKNHSQLKDYKCGICGYETCSNSKIESHKRRHLNEYKVKCELCNKGFYTSREFQEHTMLHTGDRPHSCEVCGKSYPNKYRLTDHKKLHEPNYEEMFLRFKCRFCDKGFPRRSSCVRHEKHHLGVREYACDVCGKALSSGPLLKLHMRIHTGEKPFACDVCGKSFGRVYALTMHYRVHTGERPYGCSECGKRFTQHSSLTIHMRYHTGQKPYTSDKNWFVVVKSEDKSTCPQNTGKTDPLEVNKLRNEIKCEICDKIYKRRSTLQRHMFLHDGALSHDCVVCHKTFRSEWHLKQHMKAHTREKNFKCDICGFQFSHNYTLENHKKRHSNSYRHNCNLCGHGFHSNHEFLVHKKVHTGERPYCCEVCGKSYPNKYRLVDHKTIHRPDYEETFLRFKCKLCGKGFRQQSHCATHEKRHLGQKDHMCEICGRAVNSPTELKFHMRGHTGEKPYVCPYCDKAFIRLMALKIHLRVHTGERPHGCDHCDKRFTQRSSLTIHMRYHTGVRPYKCDTCSKTLSTSKRVIKCKICGKMYKRNSTLRNHMVVHDNSHSYVCDICQKELKSEWHLKQHVKSHMREKKFKCDICGFQFGHKYSLENHKKRHLKDYRHRCEICNRGFYSNNEFLEHKKVHTGERPHLCEICNKSYPNKYRLIYHKKMHEPDYEEMFLRFKCKFCEKGFRQRSKCVLHEKRHVGQKELVCDVCGQALHTPTELKLHMRMHTGEKPFICNYCAKAFSRLTSLTMHLRIHTGERPYPCIECGKRFTQCSSLTIHMRYHTGLRPFEWFLYNSMLGSHLLSHTETRPYSCHVCGKKFKRKYEVRKHAKLHAFERDYVCDLCNYSTNCKHNFGIHRKRHFKQCEFRCDVCQKGCYSKGELQKHTAVHVEGKPYSCEVCGLSYSYKNNLSFHIRKHEPSYNPSKDYQCEICGKTFTNRSNLTSHVKFHLGKNKVVCDMCGKSLSSGESLKTHMRVHTGEKPFSCSTCGKAFKDKGYLRTHRLSHTGEKPHTCDQCGKSFTQRSTLTVHKRYHSGERPLSHSYTSINKRNTKAVKQEKQKKKIKKYGILAKILQLKDEHTSANSFYDSSSKYVLPTGGFRCDICEKCYAREGQLNKHKITHSESRPFHCSICPKTFKRKYELNTHIQIHNKEGRYSCDVCKYSTMKKSNLTLHRQRHFNQYNIKCEVCGKGYYTNYEMRLHKAVHIHGETKPFVCDVCDKQFYCEYNLNLHKKRHNSDQQSKEKFTCEHCGKKLHSRSELTRHSKYHSGNFQVVCDICGKCLSGTNVLQIHRRIHTGEKPFVCDMCGKAFSALSYLVLHKRSHTGEKPFPCGKCGKCFAQRSSRTIHMRVANILNTAPEGVTGRGNVLWVIMPNSQMHNHEHKELSSVQNEKSKFVLDKHTDLFERKRPAHNISHEKSRTKKLLQSSEFKCPICGKVCEAKHRLKYHIMSHDESRPYKCDVCDKDFKNMWHVKKHKNITHLGVKNCVCKICGYASFYRSQLKQHEKCHGGTFKYKCELCEKSFPDKTGFQAHRITFHGEEPYKCAECGKTYSKKRTLDDHTKSHIPGYKPVMKHQCELCGKTFLRINELYVHNRRHSVDKTHTCLLCDKPLSSPQSLKYHMRIHTGEKPLVCDTCGKSFRTTQLLRVHRRVHTGEKPYSCDLCSKSFSQCSTLTVHKRYHTGQRPYICQVCNLSFVTRTLLNIHTNIHKK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-