Tmon023814.1
Basic Information
- Insect
- Timema monikensis
- Gene Symbol
- -
- Assembly
- GCA_902151445.1
- Location
- CABFVZ010000968.1:21165-25919[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.42 6.4e+02 2.6 0.0 3 21 27 45 26 53 0.95 2 13 0.29 4.5e+02 3.1 0.0 3 21 64 82 63 90 0.95 3 13 0.29 4.5e+02 3.1 0.0 3 21 101 119 100 127 0.95 4 13 0.29 4.5e+02 3.1 0.0 3 21 138 156 137 164 0.95 5 13 0.29 4.5e+02 3.1 0.0 3 21 175 193 174 201 0.95 6 13 0.29 4.5e+02 3.1 0.0 3 21 212 230 211 238 0.95 7 13 0.29 4.5e+02 3.1 0.0 3 21 249 267 248 275 0.95 8 13 0.29 4.5e+02 3.1 0.0 3 21 286 304 285 312 0.95 9 13 0.29 4.5e+02 3.1 0.0 3 21 323 341 322 349 0.95 10 13 0.29 4.5e+02 3.1 0.0 3 21 360 378 359 386 0.95 11 13 0.29 4.5e+02 3.1 0.0 3 21 397 415 396 423 0.95 12 13 0.29 4.5e+02 3.1 0.0 3 21 434 452 433 460 0.95 13 13 0.66 1e+03 2.0 0.1 3 21 471 489 470 489 0.93
Sequence Information
- Coding Sequence
- ATGAAAAGGAGAGCGCTTGTCCTGATCCTGTTTGGCTGGGTTGCTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCTGATTTGCTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTCTACATATCTCCCGTGGCCGAGCTACTGGCAGTTTGTGTACATATCTCCCGTGGCCGAGTTGCTGGCAGTTTGTCTACATATCACCCGTGCCCAAGTTga
- Protein Sequence
- MKRRALVLILFGWVAGSLSTYLPWPSYWQFVYISPVADLLAVCLHISRGRATGSLSTYLPWPSYWQFVYISPVAELLAVCLHISRGRATGSLSTYLPWPSYWQFVYISPVAELLAVCLHISRGRATGSLSTYLPWPSYWQFVYISPVAELLAVCLHISRGRATGSLSTYLPWPSYWQFVYISPVAELLAVCLHISRGRATGSLSTYLPWPSYWQFVYISPVAELLAVCLHISRGRATGSLSTYLPWPSYWQFVYISPVAELLAVCLHISRGRATGSLSTYLPWPSYWQFVYISPVAELLAVCLHISRGRATGSLSTYLPWPSYWQFVYISPVAELLAVCLHISRGRATGSLSTYLPWPSYWQFVYISPVAELLAVCLHISRGRATGSLSTYLPWPSYWQFVYISPVAELLAVCLHISRGRATGSLSTYLPWPSYWQFVYISPVAELLAVCLHISRGRATGSLSTYLPWPSYWQFVYISPVAELLAVCVHISRGRVAGSLSTYHPCPS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -