Basic Information

Gene Symbol
TRERF1_1
Assembly
GCA_902151445.1
Location
CABFVZ010000454.1:11354-41936[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3e-10 1.3e-06 30.5 0.1 2 46 1010 1054 1009 1054 0.96

Sequence Information

Coding Sequence
atgcaACGTAAAAAAAGTAAAGACAAGGGTCGTCTTGACGTTGTGTGTGTTGGGGTGTTGCAGAGCCCAGGCGGCAGCAAGGCGACGGCGGCCAATGGCGTCGGTGGCGGTCAGTCCGGCGCAACGGCCGCCTCCACGGGGACGGCGTCCAAACCCCACCACTCTCATCAGCAACAACAACAGCAGCAGCAGGACCCCAAACCGGTGGAGTGCAACCTGTGTCATCGCAAGTTCAAGAACATCCCCGCCCTCAACGGTCACATGAGGCTCCATGGCGGCTACTTCAAGAAGGACTCGGAGTCTAAGAAGTGTGAGAAGAAGGAAGTGTCGGGTCCACCTCTACAGACGGCCAGTATGAGTGTCAGAGCCCTTATCGAGGAGAAGATAATCCAGAAGCGCATCACGAACCCCCACCTAGCAGTGTCCCACGCGCAGACGACACACCAGATCACGTATGCCACCGCAGATGCAAGTGGTCGTTCTGGAGCCCCTCTCCATTATTCTGTCCAATCCCCAGGGGGGTCTGTACCTGGTAAGGACCCCCCTGATCTCAACATCAAGCTCTCGTCCTTCGTGGTTCCCGCGCCTCCTCCCCAGGCAGAGAAGACGACGCGCCGTCACTCAGACTCTGAGCACTTTGTCTCTCCCCGCCTCCCTTCCGGGGGTGGAACAACCACCGAGCAGGAGGCGGTGGCCCTGGCGGAACTGCTGCTCAAGAGAAGTTCTGGGGCTTCCAAGGTGGCTGTCAAGAGGGCCAGCTCTGATCCTGGGAGtcaccagaattcgaaccccaactcTGCCAGCCCGAGTCCCCAACCCCAGCAACAGCTGCAGCTGAGTTTCCAAGGGAGTGAGACCTACTCTTTGGCAGGGGTGGGGGTGAGCTACCAGACAGATGATGGAGGGTATTTCTCTCCCAGCATCCAAGACGACGTGTTCCAACAATCTGTTCAGGACACCATGCTATTGAACGGCATGGACCCGGCTCAATTGGCCGAGACTATTCAGTTCCAAGCAGCGTCCTTACTTCAGGATCAGACTACAGCAGAACAGCTTCAGGATATAGCATCACTGGAGGACTACCAGAATGCCACCGGCATGCAGGACTCAGTTCACAGCCCTGGCGTGGGACAGTACCAGTCACATAGCAACCACTCCATACATCAAGACTTTCAAGCCGTACTCAACTCTCCATTGCCAGTCAACCTTGTAGACTTTTCCGCCTATGGACAGCAGTCGCCCATTCCCAAAGATCTCTCGTACCAACCTACGCACTCACCACTTGACCAGAAGGAGTTTATAAACTACACCAACTCCCCGCACACTGTCCTCACCAACTCCCCACTCCCTTCCCCTCTCGCACATCATGACTCTCCAAGTTTCACCTATCCAACTCCCCCGGCGAGTCAAGAGGGTCAGTCACCCTCGTTTGGTCATGGAGGAATGATCACAAGTAACACAGGCTGCGGATTACCCCTTTCCTCTCCTCAACAAGGGTCAACAGACAGTTTTGTCCAGTCGGTCATCTCACATGGGGGGCATGTTCCCCCCGTTTCATCACCCCTCTCTGCGGCCTTCTACACCACAAACATGTCCAGTTCTGCCGCGGTGGAAGAGGCTCTCTCGGAAGTCCTGCCCGCCGAGTCTATGAGTGGTCAAGGATGTATGAGATCGCATGGCCTAGGACTGTATCAATCATTAGTGAATCCATCTCCTCCGCCCCATTCACCTCTTTCCGCTACTCCTGTTCCCTCTCCCCTATCAATATCTAGTGTCCCTGCATCGTCCTCCTCAGTGTCTtcacccctcccctcctcctatGCTCAGACACAGGGACAGATTtctttccctctctctcccCACCACACATTACAATCTCAGATGATGCCAAATTCGGAAGACCCTCTCCTCTCAAGTAGCCCCAAGGACTTTTGCAGTAggaaaaagtttgattttgGTGGCATTCACTCATTCAAACTTCTTGGAAATGGAATGGTAGATTTCGGGATGGCGAACTCTGGACTGACGGGGATCATGGTGGATAGTAATGGGGAGCTTAAGTTCTTCCAGGCCGCGAACTCTCATCCCGCTAAAAACATGATGGTGTCGGGTAGTGTTAGTACAAACATTAGCTCGGCGAGTGCGAGTATGTACCAGAAGAGAAGCGAGGTGGACTCTAACAAGCTGCGACTACTGAGTAAAGTGGCGGGGAACCACCATAACCCTCAttaccaccatcaccaccatcacaaccatcaccaccaccataGTCCTCGGAACCAGAGGCCCAAACTGCAAGTCACGCTCGACAACTTGAAAGAGGAGGTGGATGATGATGTTTTTCTCAGCCCCACAAGCATCCCAGCCAGTCCCATCAGGGTTGCACGCAAACGATCTCGGCCTGAGCCTCTGTATATTCTCCCTCACCCCGTGCCCTCATACCGGTCCCGACTAAGGGCCCCACGGTTGCAAGAGCCTGGGTCCTCCTCTCCTCCACCCCAGTACACCCCTCCGCCCATGTTGAGTCCGGCGAGACAGGGGCAAGGACTGTTCTGGCAAGCCGTCAATGTGCCGCATTCGGCCAGCCTGTCACCTGCAACTTGGCCTAGCTCCACAACTGTCTCCAGGAATGGAACAATCGAGTCGTGTGGCCAGGAAGAAAGCTCCATGCCTACAGAGACCGCTCCAGAGTCTGATGCTACCCCCCACATCAACTTGGGGCCTGACTTCCAGTGTGTAATACCACAGTGGAATCCTGACAGAGAGAAGGCGAATAGAGAACCTTCCTACGAGCACCTCCTCTGGGACCCTGGCATCAGCAAAGTCAGCACAGATGCAGAAGTGGACATGTACCTGGAATTTGCGTGTTGTGCCGCTGTGCCAGGCGGTGGGCGAAATAAAGAGTATGCCTTACACTTGCTACACATGTGTCATGGAAACATTCATGAGGCAATGTTAAAGTTAATGCAACCTACCCCCTTTTTACCTTCGGGCCACCCTTTGCTTGCATACGACTACTGTGAGAGCGATCGGTGGAGTGCGGATGAGATGGATTCCTTCCACCAAGGCCTGCTGAAACACGACAAGGATTTCCTTAGCATCGCACAGGAGATTGGCTCCAAGACGATAAAACAGTGTATCCAGTTTTACTATCTTTGGAAGAAAGTGTGTCCCGAGGAGTACAAAAGATTACGTCTGATTAGACGAAGACAGAATGCAGACTATGATTTTGATGATATTAAAATGGAGGAGCCTCGATATAGCATTCCTGCCAATGATGTCGAGCTGGTATCAACAAGTTCGGAAACCAGACTCTTTGTCTGTGAATATCCGGATTGCTCAGCAAGTTTCAACTCACGGGCCGCACTGAATGGTCATATTCGTATCCACGGTGGGGGTGTTTGTGGCCGTTCACCCACCCCGGACAAGAGGCCAGCGACCGCGACACCCCCTGCCCTTGGCGACCTTCTCGAGGAATTTCCTTGCAAGATATGTGGGAAAGTGTTCAACAAGGTGAAAAGTCGCAGCGCCCACATGAAATCACACAGGCCACCTGATGCAGAGCCCAAGAAACCTAAACTTGACCCTCACAAAATGGAGGCAGCCGAGCAGACATTGGGTAGGGCCATGTGCGTGTCCTCAACCATTGGGGGAGGTGGGGGACGCCACCCCTGA
Protein Sequence
MQRKKSKDKGRLDVVCVGVLQSPGGSKATAANGVGGGQSGATAASTGTASKPHHSHQQQQQQQQDPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDSESKKCEKKEVSGPPLQTASMSVRALIEEKIIQKRITNPHLAVSHAQTTHQITYATADASGRSGAPLHYSVQSPGGSVPGKDPPDLNIKLSSFVVPAPPPQAEKTTRRHSDSEHFVSPRLPSGGGTTTEQEAVALAELLLKRSSGASKVAVKRASSDPGSHQNSNPNSASPSPQPQQQLQLSFQGSETYSLAGVGVSYQTDDGGYFSPSIQDDVFQQSVQDTMLLNGMDPAQLAETIQFQAASLLQDQTTAEQLQDIASLEDYQNATGMQDSVHSPGVGQYQSHSNHSIHQDFQAVLNSPLPVNLVDFSAYGQQSPIPKDLSYQPTHSPLDQKEFINYTNSPHTVLTNSPLPSPLAHHDSPSFTYPTPPASQEGQSPSFGHGGMITSNTGCGLPLSSPQQGSTDSFVQSVISHGGHVPPVSSPLSAAFYTTNMSSSAAVEEALSEVLPAESMSGQGCMRSHGLGLYQSLVNPSPPPHSPLSATPVPSPLSISSVPASSSSVSSPLPSSYAQTQGQISFPLSPHHTLQSQMMPNSEDPLLSSSPKDFCSRKKFDFGGIHSFKLLGNGMVDFGMANSGLTGIMVDSNGELKFFQAANSHPAKNMMVSGSVSTNISSASASMYQKRSEVDSNKLRLLSKVAGNHHNPHYHHHHHHNHHHHHSPRNQRPKLQVTLDNLKEEVDDDVFLSPTSIPASPIRVARKRSRPEPLYILPHPVPSYRSRLRAPRLQEPGSSSPPPQYTPPPMLSPARQGQGLFWQAVNVPHSASLSPATWPSSTTVSRNGTIESCGQEESSMPTETAPESDATPHINLGPDFQCVIPQWNPDREKANREPSYEHLLWDPGISKVSTDAEVDMYLEFACCAAVPGGGRNKEYALHLLHMCHGNIHEAMLKLMQPTPFLPSGHPLLAYDYCESDRWSADEMDSFHQGLLKHDKDFLSIAQEIGSKTIKQCIQFYYLWKKVCPEEYKRLRLIRRRQNADYDFDDIKMEEPRYSIPANDVELVSTSSETRLFVCEYPDCSASFNSRAALNGHIRIHGGGVCGRSPTPDKRPATATPPALGDLLEEFPCKICGKVFNKVKSRSAHMKSHRPPDAEPKKPKLDPHKMEAAEQTLGRAMCVSSTIGGGGGRHP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01448057;
90% Identity
iTF_01449059;
80% Identity
iTF_01449059;