Tmon027364.1
Basic Information
- Insect
- Timema monikensis
- Gene Symbol
- retn
- Assembly
- GCA_902151445.1
- Location
- CABFVZ010001219.1:116357-139085[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4 4.5e+04 -3.0 0.0 42 63 80 101 79 123 0.64 2 2 5.7e-20 5.8e-16 60.8 0.0 16 89 133 204 113 204 0.93
Sequence Information
- Coding Sequence
- ATGTCGGTTGTAAATCAGTTTAGCGGAGGTTTCAGGAACGGATCTTTCAGTTCACCTCCCCCTAACACCCTCCCCCTCACTCCTCCCCTTAATCTCTTTAATTATCAGGGGAGAGAGGATCCTTACAATGTCCTTCACCGTCAGATCTTGGGGGCTGAGGTGTCTCGGGCGCCTGACTCGCATTCACTGATTTCCGCATCCGTTATCCGCAATATCTGGGGCTCTTCACATCCGACAAAGGAGGGAGGCGTGGATAAAACCACAAGGTTAGATGAGCTATTAGAAGTGGAGGGTAGCCTGAGAGGCAGAGCCACACATGGCTCGCATGTTGCCTTTCAGTACCGGGAATATAGCAGGCAATCCCTCGTCTTAAGGACGTCAGCCCGTGACGTCACCGCGGGCACGCCGATCAACCGACTACCGATCATGGCCAAGTCTGTGTTGGACCTATACGAGCTGTATAACCTGGTGATCGCCCGAGGAGGTCTGGTGGACGTCATCAACAAGAAGTTGTGGCAGGAAATCATCAAGGGCCTTCATCTGCCGTCATCCATTACCTCGGCAGCCTTCACTCTCAGGACACAGTACATGAAGTACCTGTACCCGTACGAGTGCGAGAAGCGACGCCTGAGCACGCCGGCAGAGCTCCAAGCGGCGATAGACGGCAACAGACGCGAGGGAAGACGCAGCAGTTATGGCACCTACTCTGACATGATCCAGCGCAGTCCGCTCAGTAGTTTACCCGTGAGTCAGCTGGGACAGATGTCGCCACTGAGCCTGGTCACCAGCAGGGCGGCCATGAACGGAAACTCacaccaccatcatcaccatcaccaccacccGTCGTCTCACCACCCGTCACACCCCCAACCGCTGGGTCAGCCCATGGGCACAGGGCCGACCCCAGGTCTCGCAGCGTCAGAGTTCGAGAACCGTATGGCCGAGTACGTCAAGCTTCTCAACAAGGAACTGCGCAGCTCCGCGGCGACACCCCCTCACCACGCCTCCCCTCCTACCTCGGCGTCCCCCCAGGAGGCGGCTCTAAGCGCCCTCGAGATGTCTCGACTTACACTCTGGAACCTCTACAACAACAATACCCCGGTGGCCCCGCCCCCTCCCACAGCTGCGGAGCCCCAGAAGGAGGCCCTCAACCTCGAGGTGCGGGAACAGCAGGCGCGTGCCATGCAGGATGTGATGAGCAAACGTGAGAGCGATGAGTCCTTACTGCCACCACCCGCCAAGAGGCTCCTGGCCGAGGAGGACCCCGTCAAGCCTTCGTCGGGGGTAGGAGGGACACACATCAAGATCGCAAGCAGAGGTGATAGCAGAACTGGAATAGATAACTCACTCGTAGTCAGCATGGAGATCAACGGTATGATGTACCAGGGTGTGCTGTTTGCACAGAGCACAAGGAGCCGTATGACGTGA
- Protein Sequence
- MSVVNQFSGGFRNGSFSSPPPNTLPLTPPLNLFNYQGREDPYNVLHRQILGAEVSRAPDSHSLISASVIRNIWGSSHPTKEGGVDKTTRLDELLEVEGSLRGRATHGSHVAFQYREYSRQSLVLRTSARDVTAGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGTYSDMIQRSPLSSLPVSQLGQMSPLSLVTSRAAMNGNSHHHHHHHHHPSSHHPSHPQPLGQPMGTGPTPGLAASEFENRMAEYVKLLNKELRSSAATPPHHASPPTSASPQEAALSALEMSRLTLWNLYNNNTPVAPPPPTAAEPQKEALNLEVREQQARAMQDVMSKRESDESLLPPPAKRLLAEEDPVKPSSGVGGTHIKIASRGDSRTGIDNSLVVSMEINGMMYQGVLFAQSTRSRMT*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -