Tgen017832.1
Basic Information
- Insect
- Timema genevievae
- Gene Symbol
- pnr
- Assembly
- GCA_902155825.1
- Location
- CABFWO010001162.1:73465-102437[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-18 7.7e-14 53.0 3.0 1 35 649 682 649 683 0.97 2 2 1.8e-18 1.9e-14 54.9 6.8 1 35 706 739 706 740 0.97
Sequence Information
- Coding Sequence
- ATGGAACAGAAAGAAGCGAGGGAAGGCGTCAAAGAGGAGGCCATCTCCCCCCAACAACTGCCGCCTCCCCAACGCCAGGAGCCCCCCTCAGTGATTACCTCTCAGCAGCGCCACGTGCGGACCATCACCACGGCGGGCCACATCACCACCGGTCATGTGCCCGATGAGGACGAGGACTACGAAGAGGAGGAGCTACCCCCGCCCCCTTTGCAACAGGTAGAGACAGGGGGAGCCGAGGAGCAACTGGTGCCAACGACACCCGAGCAACAGTCGGAGATAGTTGAgcaacaacaacagcaacagCAAGGTCAACAGAGTCCCACCAACCAATTGTACTCTTCCCCCTCGGCGTCCATTGAACTCTCTCAGGCGCCTCCTCTGTCCAACTCTGCTCATCCCTCCCCTGCCGGACACACCCCTAGAAGCAGTCAACCTTCTCCCAGCGGCCACGTCCCTCTCACACCTCCTGACCATCACCAACAGGTCTACCAATTCACCCCTAGTCACGAGCAACAAGTGGTTCAGAAGGTCCAAGTTGCAACGCACCTCCCGCCCCCTTCTCCTCAGCAGATACGTTACACCGCGACTCCTACTAGTCAAGAGATTCACATCCAGAGGAGTCAACCCCAGATGAGGTACACGCCACCGATATCGAGGGATCAGATAAGAGTCGCCCCTCAACATCAGATCATCTACACGAGCGCCTCTATCCCCGATAGAGTCCATCACACGTTCCAACAGCAGCATCAACAGAGTCCTCCTCCACCTCTGATGGCGATCAACAGCCTCCATCATTCAGGAGGACACACCATAACTCAGAACGTCCAACACAGGTACACCCCTACTCCTAATAGAGACCGCATGATCCAGAGTTCCAACCAGCATGGTCGGTACGCGTCACCATCCATAGAGCATCAGCATCCTAACGACGTTCAGCAGAGGTACGCCACCCCTCCGTCGACAATCCAAGGACACCACGAACTTCTGCAACAGCAGGAAGAACAGCAGCAAATGCAAGCGTACCAGCATCAAGACATGACACCCCCTCCTCCTTTGGAACACATCGTCCCGAGTCACAGTAGTCAGCAGATGACCGCGTTCAGCGAGAACATCCAGGTGAAGTTCGAGAGCGACGCAGACCTAGCGCACCTCCACCATATAAAGGACCCTGCCATGTCCCCTCAAGGGGGCGTCGAAATGGGTAGTGGTCACCACCTGACGCAACAGGATCTGCCCTCGACGACGTACACAACCTTAGAGACCGTGACCTTGACGAACTCTTCCGGTGCGCAGTACCAAGGAGGATACAGTGAGGTTGTGGGAGCCCCCCAGTATCAGATCCTCCCAGCGTCCAGCACCCCGTCATCCGTTGGTGGATTCCCACCTTTCCTGACCAAGTCCAGCGGTTCCAACAGCGATCTCTACACCTTGAACCCTTCCCCAACAGGAAGTTTCGGCAAAGTCGTCTTAGCGGGATCCCCGGACGGCAGTTTGGTTTACATGAAGTCCGACCCTACTCTGACGTCGGCCATCCATCCTAGCAAGACCAGCACGGCCCAGCAGATCTTGTACAGCAGTCTTCAAGGCCACAACCAGTCACTGGCGTATGAGCAGAACCAACAACCTGGTTCCCCAGGTTCGCAGCAGGTAACCCTGTACGGTCACGCGGGTTCGGCGAGCTACCAGTACATCAGCAAGTTGCCTTCGGACGCCGGGACGCAATACTGGGCGACAACGTCAGTGAACGGGTCCCCTCCTCATCTCGACTACGTCGGGGCAGGGTACGGAGGGTCCACCCTGCAGAACTCTCTCAACGCTGAGGGAAGTGGTGGTATTCAGTTGAGCAACGGCTCGTACATCAGCGGCGGTCCGTCTACTTCGTGGAGCAGCATGGGGCTAGATGACTCGTACGATCCAAATCACATGCTGGACACGGTGAAAGAGTGCGTAAACTGCGGCGCCAACTTCACCCCCCTCTGGCGTCGTGACGGTACCGGTCACTACCTATGTAACGCTTGCGGTCTATACAACAGGATCAATGGCGTCAACAGACCTCCCGTGCGCAACCAACAGAAGAAGATTGCTTCGACTAGCAACAGAAGAAACGGCGTCTGCTGCGCCAACTGCAACACCACCAGCACTACACTATGGAGGAGAAACAATAACGGAGAACCCGTTTGTAACGCCTGCGGCTTATACTTCAAGTTGCACAACGTGAACCGGCCTCTGAGCATGAAGAAGGATGGTATACAAACCAGGAAGAGGAAACCAAAGAACACAAGTATGGGGCAATCTGTCGGCGGTTCCATGGGCTCCAACATAAAGACGGAACCAAAACATCAAGAGCAGGGGGCAGACCCCCCAGTCAGGTGTGAGTCGCGGGAGGTTGACCCAGTGTGTCGTGGCCTGATTGCAGTGGACAAGATGGATATGTTGGGGCACATGTATGTTGGAggaggtggtggtggtggggcaGGTGGAGACGCGAAATCTTTGATACAGCACCAACACCAGCACCAGCAGCAACTGGTGCACCACGGGGGTTTTTTATTGAGCGACGATCTGGGGGAGCAGTATATGGGGGGTGCTGTCCCCTCACAGTCACCTCTGCAACTACCGTCCGCCATTCTCCTCAACCGACACATTTCAAACGTACCTCCATTAGAACCCATACACTCGAGAGCGTCTTCAGACGTCCTGACGACCGTCATCACTTCAACATCAGTCATCAACAACGACCGCGACAACTAG
- Protein Sequence
- MEQKEAREGVKEEAISPQQLPPPQRQEPPSVITSQQRHVRTITTAGHITTGHVPDEDEDYEEEELPPPPLQQVETGGAEEQLVPTTPEQQSEIVEQQQQQQQGQQSPTNQLYSSPSASIELSQAPPLSNSAHPSPAGHTPRSSQPSPSGHVPLTPPDHHQQVYQFTPSHEQQVVQKVQVATHLPPPSPQQIRYTATPTSQEIHIQRSQPQMRYTPPISRDQIRVAPQHQIIYTSASIPDRVHHTFQQQHQQSPPPPLMAINSLHHSGGHTITQNVQHRYTPTPNRDRMIQSSNQHGRYASPSIEHQHPNDVQQRYATPPSTIQGHHELLQQQEEQQQMQAYQHQDMTPPPPLEHIVPSHSSQQMTAFSENIQVKFESDADLAHLHHIKDPAMSPQGGVEMGSGHHLTQQDLPSTTYTTLETVTLTNSSGAQYQGGYSEVVGAPQYQILPASSTPSSVGGFPPFLTKSSGSNSDLYTLNPSPTGSFGKVVLAGSPDGSLVYMKSDPTLTSAIHPSKTSTAQQILYSSLQGHNQSLAYEQNQQPGSPGSQQVTLYGHAGSASYQYISKLPSDAGTQYWATTSVNGSPPHLDYVGAGYGGSTLQNSLNAEGSGGIQLSNGSYISGGPSTSWSSMGLDDSYDPNHMLDTVKECVNCGANFTPLWRRDGTGHYLCNACGLYNRINGVNRPPVRNQQKKIASTSNRRNGVCCANCNTTSTTLWRRNNNGEPVCNACGLYFKLHNVNRPLSMKKDGIQTRKRKPKNTSMGQSVGGSMGSNIKTEPKHQEQGADPPVRCESREVDPVCRGLIAVDKMDMLGHMYVGGGGGGGAGGDAKSLIQHQHQHQQQLVHHGGFLLSDDLGEQYMGGAVPSQSPLQLPSAILLNRHISNVPPLEPIHSRASSDVLTTVITSTSVINNDRDN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01449142;
- 90% Identity
- iTF_01445330;
- 80% Identity
- -