Basic Information

Gene Symbol
Iswi_1
Assembly
GCA_902155825.1
Location
CABFWO010004426.1:5945-34049[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.3e-06 0.029 16.4 0.0 3 41 793 832 792 832 0.95
2 2 0.0058 20 7.3 0.0 3 21 895 914 893 917 0.90

Sequence Information

Coding Sequence
ATGTTTTATCCTCTACAGAATGCATCTTCTGCTGATACAATTTCATCACGAGGAAAGGTGGAAGACTATGAAACCAAAGTTgaaacGGACAGGGGTAAACGTTTTGagtttttactgaagcaaaCAGAGATTTTTACCCATTTTATGTCCAACAATCAACGAGACAAACCAGTGTCAAGCCCGCTGAAATTGAAACCAGGTAGACCCCGGAAGAATGTTGAGTTGAACAAGTCCATTGTTGGAGATCCTGGAGATCACCGACATCGTAAGACAGAACAAGAAGAAGATGAGGAACTGTTGGCGGAGACCAACTCGAGTCGTCGGACCATCATCAGTTTCGATCAGTCCCCACCCTATGTGAAGAACGGAGAAATGAGGGATTACCAAGTGCGCGGCCTCAACTGGATGATCTCGCTCTACGAGAACGGCATCAACGGCATACTGGCCGATGAGATGGGTCTAGGAAAGACCCTGCAAACAATATCACTCCTGGGGTATATGAAGCATTATCGAAATATTCCTGGTCCTCATATTGTTATTGTTCCGAAGTCAACGTTAGCTAATTGGATGAATGAATTCAAGAAATGGGTCCCTTCTCTTAGGGCAGTTTGCCTCATAGGGGACCAGGAAACAAGGAATGTATTTATCCGTGAGACATTGATGCCAGGTGAGTGGGATGTGTGTGTGACCTCTTATGAAATGGTGATTAAGGAAAAGAGTGTgttcaaaaaatttaactgGCGCTACATGGTGATTGACGAGGCCCACCGCATCAAGAACGAAAAGTCCAAGCTGTCGGAAATAGTACGAGAGTTCAAGACGACCAACCGTCTCCTTTTGACCGGGACCCCCTTGCAGAACAACCTGCACGAACTTTGGTCACTTCTTAACTTCTTGTTGCCAGAGGTGTTCACGTCCAGCGATGATTTTGATGCTTGGTTCAACACTAACACCTTCATGGGGGACAATTCACTAGTGGAGAGACTTCACGCCgTCCTACGTCCATTCCTTCTTCGTCGTTTGAAATCTGaagtggaaaaaaaactcaaaccAAAGAAGGAAGTGAAAGTTTACATCGGTTTGAGTAAAATGCAAAGAGAATGGTACACCAAGGTCTTGATGAAGGACATAGACATTGTGAACGGCGCTGGAAAGATTGAAAAGATGCGGCTCCAAAACATCTTGATGCAGCTCAGAAAGTGCTCAAACCACCCATACCTTTTTGATGGAGCCGAACCAGGACCCCCTTACACGACAGATCAACATCTTGTATACAACTGTGGTAAAATGGTGCTCTTGGACAAGTTGTTACCTCGACTGCAAGAGCAAGACTCAAGAGTTCTTATTTTTAGTCAGATGACTCGAATGTTAGATATTCTAGAAGACTACTGTCATTGGAAGTGCTACAAGTATTGCCGTTTGGATGGTCAGACTCCCCATGAGGATCGTCAAAGGCAGATCAACGAGTTCAACGCCCCAGGTAGCGAGAAGTTCCTATTCATGTTGTCCACTCGAGCCGGTGGTCTAGGGATCAACTTGGCCACTGCTGACGTTGTCGTCATATATGACTCTGACTGGAATCCGCAGATGGATCTTCAGGCCATGGATCGTGCTCACCGTATTGGCCAGATGAAACAAGTACGAGTGTTCCGATTCATCACAGAGAACACGGTGGAGGAAAAGATAGTGGAGAGGGCAGAGGTGAAACTGAGGCTTGACAAACTTGTTATCCAACAAGGACGTCTGGTTGACAGCAAACAAAACCAACTTAACAAAGATGAAATGTTGAACATGATTAGACACGGAGCGAATCATGTGTTTGCTTCGAAAGACTCTGAAATCACAGAAGAGGATATCGACACTATTCTTGAGAAGGGTGAAGCAAAGACAGAAGAATTGAAACAAAAGCTCGAAACTCTAGGAGAATCCTCTTTGAGAAACTTTACAATGGATACAGGACCCTCTGAATCAGTGTACCAGTTTGAAGGAGAGGATTACAGAGAAAAGCAGAAGATCCTTGGTGTTGGTAACTGGATTGAACCTcccaagagagagagaaaagctAACTACGCTGTGGACGCTTATTTCCGGGAAGCTCTTCGAGTTTCTGAGCCAAAAGCCCCAAAGGCACCTAGACCTCCGAAACAACCTATTGTTCAAGACTTTCAGTTCTTCCCACCACGGTTATTTGAGCTTTTGGATcaggaaatatattatttccggAAAACAGTGGGCTATAAGgTTCCAAAAAATCCAGAGCTTGGTTCAGATGCGTCTCGCATTCAGAAAGAAGAGCAAAGGAAAATCGATGACGCTGAACCCCTTTCAGATGAGGAAATGTTGGAAAAGGAAAGATTACTCACACAGGGATTCACCACGTGGTCGAAGCGAGACTTTAACCAGTTCATCAAGGCCAACGAGAAGTATGGCAGGGACGATATAGAAAACATCGCTAAAGAGGTGGAAGGGAAGACTCCCGAGGAGGTGATGGAGTATAGCACAGTGTTCTGGGAGCGATGCAGTGAGCTACAGGACATTGACCGTATAATGGCACAGATTGATCGAGGGGAGGCCAAGATACAGCGCAGGGCCAGCATCAAAAAAGCTTTGGATGCCAAGATGGCAAGGTATCGTGCACCATTCCACCAGCTGAGGATAGCGTACGGCACTAACAAAGGAAAGAATTACACAGAGGAAGAAGACAGATTCCTTGTGTGCATGCTCCACAAGCTGGGCTTCGACAAAGAGAACGTTTATGAAGAACTTAGAGCAGCCGTTAGATCTGCACCCCAATTTCGCTTCGACTGGTTCATTAAGTCTCGAACGGCGATGGAGCTCCAGCGGCGTTGTAACACGCTCATCACGTTGATAGAGCGCGAGAACCAAGAGTTGGAAGAAAAGGAGCGTgcagagaagaagaaaagggcGCCTCGAGGCCTTTCTGGGAGTTTGGGTGGCACGCCCGGGGGGATGGCCATGGGAGGCACCAAGAGCGCTCAGAAGAGAAAGGGGGAGAATCTTTCCACACCTGAAAATAAATCCTTTGGATTCTCACAGATACTGTCTGTTCCTTGCAACAATTTTACCTGTGCTGCTGGAGGATGTAGTATCATTGTGACTGTGACCCTGCACACTATGGGGCACAAGTATGGCGGCTACCCCAACCAGAGACCCGGGCGTGGTAGACTGGTGGTCACCAGACCTCACACTACTCAATTTTTCCTTGTGGTGTCACCTTAA
Protein Sequence
MFYPLQNASSADTISSRGKVEDYETKVETDRGKRFEFLLKQTEIFTHFMSNNQRDKPVSSPLKLKPGRPRKNVELNKSIVGDPGDHRHRKTEQEEDEELLAETNSSRRTIISFDQSPPYVKNGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHIVIVPKSTLANWMNEFKKWVPSLRAVCLIGDQETRNVFIRETLMPGEWDVCVTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPEVFTSSDDFDAWFNTNTFMGDNSLVERLHAVLRPFLLRRLKSEVEKKLKPKKEVKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDQHLVYNCGKMVLLDKLLPRLQEQDSRVLIFSQMTRMLDILEDYCHWKCYKYCRLDGQTPHEDRQRQINEFNAPGSEKFLFMLSTRAGGLGINLATADVVVIYDSDWNPQMDLQAMDRAHRIGQMKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQQGRLVDSKQNQLNKDEMLNMIRHGANHVFASKDSEITEEDIDTILEKGEAKTEELKQKLETLGESSLRNFTMDTGPSESVYQFEGEDYREKQKILGVGNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPIVQDFQFFPPRLFELLDQEIYYFRKTVGYKVPKNPELGSDASRIQKEEQRKIDDAEPLSDEEMLEKERLLTQGFTTWSKRDFNQFIKANEKYGRDDIENIAKEVEGKTPEEVMEYSTVFWERCSELQDIDRIMAQIDRGEAKIQRRASIKKALDAKMARYRAPFHQLRIAYGTNKGKNYTEEEDRFLVCMLHKLGFDKENVYEELRAAVRSAPQFRFDWFIKSRTAMELQRRCNTLITLIERENQELEEKERAEKKKRAPRGLSGSLGGTPGGMAMGGTKSAQKRKGENLSTPENKSFGFSQILSVPCNNFTCAAGGCSIIVTVTLHTMGHKYGGYPNQRPGRGRLVVTRPHTTQFFLVVSP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01510566;
90% Identity
iTF_00209760;
80% Identity
iTF_01448512;