Tgen027676.1
Basic Information
- Insect
- Timema genevievae
- Gene Symbol
- Kdm5
- Assembly
- GCA_902155825.1
- Location
- CABFWO010002296.1:31256-36118[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-26 1.9e-22 81.4 0.0 3 89 97 179 95 179 0.94 2 2 10 7.4e+04 -3.9 0.1 58 83 734 762 733 764 0.72
Sequence Information
- Coding Sequence
- ATGTCTTCTCCTGTTAAGTATGCTTGTGGTTCTAAATCTGCCAGACATTTACCTGATTTCGAGTTCATTGTTCCAAAGGAGGCTCCCGTGTTCGAACCCACTAATGAAGAATTTGAGGATGCACTTGCATTTATTAGGAAGATCCGTCCAACTGCGGAAAAATTTggtatatgtaaaattaaaccCCCACCTGGTTGGCAGCCTCCATTTACTGTTGATGTTGACAACTTCAAATTTACACCTAGAATTCAACGTTTAAATGAATTAGAGGCTCAAACAAGAATTAAGTTGAATTTCTTGGACAAAATTGCAAAGTTTTGGGAGCTTCAAGGTTCATCCCTCAAAATTCCAACGGTAGAAAAACGACAATTGGATTTATATAGCTTGCACAAACTAGTTCAAGAAGATGGAGGATCAGATACAGTGACAAGAGAAAAGAAATGGAACAAGATTGCTACAAAGATGGGTTTTCCTATAGGTCGGGGTGTGGATTCACAATTGAAGAGTCACTACAATAGAATATTACATCCTTATGATGTATTTGATGAAGTTAAGGATGTTCCCAATGTAAAAAGTGAATATGAAGTGGAAGATGGCAAGAAACCAGACAAAGACTACAAGCCTCATAGTATTGCTACAAGACAAGAAATAAAACcaccatttgaaaaatatggcCGTCGTTCAAAGAGGTTTGGTTTGGATGATGAAGTGCACGATGTAGATGATATTGGTTGTGGTAGCACAGATTCTGTTGAAAATAAAGAACTAAGGAGATTGACATTTTATGGGGCAGGTCCTAAAATGGCTGGTTATCATATGATCATGAGGGAACTTAAACCAAAGAAGAAAGCAAGAACAAAGAAAGTGGAGAATGCTGGCAATGCAGATCCTTTGTCAAAGTATGTGTGTCAGAATTGTAGCAGGGGTGATGTAGAAGAAAGTATGTTGTTGTGTGATGGATGTGATGACAGTTATCATACATTTTGCCTGGTGCCACCACTGACAGAAATACCTAGAGGAGATTGGAGGTGTCCTAAATGTGTTGCTGAAGAGGTGAGTAAACCGATGGAAGCTTTTGGATTTGAACAGGCCCGTAGAGAATATACTCTGCAGCAGTTTGGGGAAATGGCTGATAAGTTCAAAATGGATTATTTCAGAACCCCAGCACATTCTGTTCCATCTTCAATTGTAGAGCGGGAATTCTGGCGACTAGTTTCTTCAATTGATGAAGATGTGACTGTAGAATATGGTGCAGATTTGCATACCATGGATCATGGCTCAGGTTTTCCcaccaaatttacaaaaaatcttCACCCTGTTGATCAAAAGTATGCTGATTCAGATTGGAACCTGAATAATCTTCCTGTGTTGGAAGCTTCAGTATTGGGACACATTAACGCTGATGTATCTGGCATGAAAGTGCCTTGGATGTATGTTGGAATGTGCTTTGCTACTTTTTGTTGGCATAATGAAGATCATTGGAGCTATTCCATCAATTATCTTCATTGGGGAGAGCCAAAAACTTGGTACGGAGTCCCGGGAGGGAAAGCAGAAATATTTGAGTCTGCTATGAAAAGAGCAGCTCCTGAACTATTCCACTCTCAACCTGATTTGTTACATCAACTTGTTACTATCATGAACCCCAATATACTCATGGATGCAGGTATCCCCGTGTGCCGCACAGATCAGCATGCGGGTGAGTTTGTCATTACTTTCCCACGAGCTTATCATGCAGGGTTCAACCAAGGCTACAACTTTGCAGAAGCTGTTAATTTTGCACCAGCAGATTGGCTGAGGATGGGTCGAGAATGTGTCACTCACTATTCTACACTACGtcgtttttgtgttttttcacACGATGAATTAGTGTGCAAAATGGCTTCGGATCCTGAGAAACTTGATGTAACAATTGCTGCTGCAACTTATCGAGACATGTTTGAAATGGTGAGCTCTGAGACAAAACTGCGTAAAGCTCTTCTTGAATGGGGTGTGGTCGATGCTGAACGAGAGTCATTTGAGACACTTCAAGACGATGAGAGACAATGTGATGTTTGTAAAACTACATGCTATCTTTCTGCAATTACTTGCAGCTGCAACCCAAAACGTATTGTTTGCTTGCGACATTATTCAAGTCTGTGTGGCTGTCCAGCGAAAAATCATAGCATGAAGTATCAATTCATCTTAGACGAATTGTTGGAAATGTTGCAAAAACTCAAGTTTTATGCCGAATCATTTGATAAATGGTcagaaaatattagaaatgctTTATCacataaatatcaacaaaaggTCACTCTCTCCAGATTGAAGGAGCTATTTCAAGAAGCCGAGGATAAAAACTTTCCTGAGGAATCAAGTCTTATGAATTCTATTCGGCTTATCATAGAGAAAGGAGAAAAGTACTCAAATGTTGCTCAAAAAATCCTAAACCGAAGGGCTTGTGCATCAAATGATAAAGTTGATTGTACTACCAAACTAACAGTGGAAGAAGTAACAAGGTTTTATGAAGAAATTGAAGACCTTGCTGTTCTTATAACTGAGCGAGATGAAGTGAAAGATTTGGTTGAAAATGTAAAAGCATTTGAAAAGATGGCAGAAGAACTTTTAAGTAAAGACAATCCTCAAAATGAGGAACTAAAACAGTGTATGGAAGCTGAATTGGCATTGAATGCAGTTATTCATCTCACAGATATTTCAAAGTTGAAAGAACTGTGGGAGAAATCAAATTGGTTTGAAAATATTCGTAATCTGGAGGAGAGTACAAGTAATATCAAGTTGGAAACTTTGCAAAGACTTGTTAACATTGGCGCTAGCTTACCAACCAATAAAAATGTGGAAAAGCATTTGGTGAACTTGAAAGACCTGCTTTCTAAAGTTGAAGAAGTCGAACAAAGGGCCAACAGTTTACTGACTCAAGAGTATCGTGTCCAGACTAGTGATATTCAAGATGTTCTTGAAGCTGCAAAAAAAGTGTCGTGTGTAACACCAAGCGTAACAGAGTTACAAAACGCCTTAGAGAAGGGAAATGAATGGTCTGTTAAAATCCCCGAGGGAGAAGCACTTCAATGTCTTGCTGAACGCGTAGCAAAATGGCAGCAgagaataaatgaaacattgacATTGGAAGAAGTCACTTTAGCTTTGAAGAAAGTTTCAGAAGTGTCTGAGAAACCCATGAAAAGTATGTGCAGTGAAAAATTGCAAGAGGGGGGAAGTGAAAACTCACAACTATCACAGACTGTAAAAGATGTTTCGTCCTCAGAGAACAATATAAGTGCACACTTTATTGACTCCCAACTAGAACCCAATGTAGCTGAACTAGCTACTAACGCAGGCTTAGGAACAACCACCGGTAAAGAAACACAGACACCTAAAAAACTATCACTTTCAAATGTTGAGCAGGAAAGCGATTCGTCAAGCCCTTGCGACAAAACAGAAAGTGAAAACACTGATAGTAGTATTGAGGTAGATGTCGTCTCCATCTCAGAAGATAAGTTCAACATACCTAGCGGTGATAAAAATGTCAGTTTGAAACTCTCAAATAATACCAACTCTCAATTAGTAATATCTTTAAGTGCAGAAACTAGTTTTCACCTGGAGAAACTAATGATGGAGGCAGATTTAATGGAAGTTTCACTAGATGACAATgataaaatatggaaaattctCAAACATACAAAGAAACACAAGGGATTAGAGGTTTTCCCAGATATCAAGGAGGTCGAAAATGAGATACAAGCCAACAAACTCGAGCGCGAGGAACAGAAAGCGCGGAAACGAACGGTCGTCGAGTCTTGCCTGATCGGTCAAAGCAAGAAACTGCGGTCCGCCGCAGAGGGGAGGAAGACAAAAAGTCGGGCAGACGCGAAGCTTGTGGTTTTAGAAGGGAAGGATGATATGCTGTGGGATAACGGGGATGACTGCGCTGCTCAACTGTGTCTGCAGCCTCAGTACAGCTCGGTAGACTGGGTGCAGTGTGACGGGGGGTGCGACGAGTGGTTCCACCTGCTGTGTGTGGGGCTGCACAAAGGGGACCTGCAGGAGAACGAAGACTACATCTGCAAAGGATGCAAGGAGAACCAGGAAGAAGTGGAGTTGGCCAACGTTATGTTGGAGGTGGACTGCTCCACTCAGGACCCACTTGCGATGGATACGGTTAATATCTCACCAACAAACCAGGACCTTAGCCAGCCTCTAGAAATTGTCCTGGATTAG
- Protein Sequence
- MSSPVKYACGSKSARHLPDFEFIVPKEAPVFEPTNEEFEDALAFIRKIRPTAEKFGICKIKPPPGWQPPFTVDVDNFKFTPRIQRLNELEAQTRIKLNFLDKIAKFWELQGSSLKIPTVEKRQLDLYSLHKLVQEDGGSDTVTREKKWNKIATKMGFPIGRGVDSQLKSHYNRILHPYDVFDEVKDVPNVKSEYEVEDGKKPDKDYKPHSIATRQEIKPPFEKYGRRSKRFGLDDEVHDVDDIGCGSTDSVENKELRRLTFYGAGPKMAGYHMIMRELKPKKKARTKKVENAGNADPLSKYVCQNCSRGDVEESMLLCDGCDDSYHTFCLVPPLTEIPRGDWRCPKCVAEEVSKPMEAFGFEQARREYTLQQFGEMADKFKMDYFRTPAHSVPSSIVEREFWRLVSSIDEDVTVEYGADLHTMDHGSGFPTKFTKNLHPVDQKYADSDWNLNNLPVLEASVLGHINADVSGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGGKAEIFESAMKRAAPELFHSQPDLLHQLVTIMNPNILMDAGIPVCRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECVTHYSTLRRFCVFSHDELVCKMASDPEKLDVTIAAATYRDMFEMVSSETKLRKALLEWGVVDAERESFETLQDDERQCDVCKTTCYLSAITCSCNPKRIVCLRHYSSLCGCPAKNHSMKYQFILDELLEMLQKLKFYAESFDKWSENIRNALSHKYQQKVTLSRLKELFQEAEDKNFPEESSLMNSIRLIIEKGEKYSNVAQKILNRRACASNDKVDCTTKLTVEEVTRFYEEIEDLAVLITERDEVKDLVENVKAFEKMAEELLSKDNPQNEELKQCMEAELALNAVIHLTDISKLKELWEKSNWFENIRNLEESTSNIKLETLQRLVNIGASLPTNKNVEKHLVNLKDLLSKVEEVEQRANSLLTQEYRVQTSDIQDVLEAAKKVSCVTPSVTELQNALEKGNEWSVKIPEGEALQCLAERVAKWQQRINETLTLEEVTLALKKVSEVSEKPMKSMCSEKLQEGGSENSQLSQTVKDVSSSENNISAHFIDSQLEPNVAELATNAGLGTTTGKETQTPKKLSLSNVEQESDSSSPCDKTESENTDSSIEVDVVSISEDKFNIPSGDKNVSLKLSNNTNSQLVISLSAETSFHLEKLMMEADLMEVSLDDNDKIWKILKHTKKHKGLEVFPDIKEVENEIQANKLEREEQKARKRTVVESCLIGQSKKLRSAAEGRKTKSRADAKLVVLEGKDDMLWDNGDDCAAQLCLQPQYSSVDWVQCDGGCDEWFHLLCVGLHKGDLQENEDYICKGCKENQEEVELANVMLEVDCSTQDPLAMDTVNISPTNQDLSQPLEIVLD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01444486;
- 90% Identity
- iTF_01444486;
- 80% Identity
- -