Tdou000667.1
Basic Information
- Insect
- Timema douglasi
- Gene Symbol
- ZFHX3
- Assembly
- GCA_901482245.1
- Location
- CABEEJ010000021.1:262912-276062[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.21 51 6.9 0.5 1 23 50 73 50 73 0.95 2 15 0.07 17 8.4 0.0 1 23 93 116 93 116 0.92 3 15 0.15 37 7.3 1.9 2 22 229 249 229 252 0.90 4 15 0.22 51 6.9 1.1 3 23 266 289 264 289 0.88 5 15 0.016 3.8 10.4 1.7 1 23 311 333 311 333 0.97 6 15 0.004 0.95 12.3 0.9 2 23 340 362 339 362 0.96 7 15 0.00092 0.22 14.3 3.9 1 23 475 499 475 499 0.92 8 15 0.011 2.6 10.9 0.6 1 22 519 540 519 543 0.89 9 15 0.0015 0.35 13.7 0.2 1 23 605 629 605 629 0.93 10 15 0.2 47 7.0 0.2 2 21 774 793 773 794 0.93 11 15 1.1 2.6e+02 4.6 1.6 2 19 936 953 935 958 0.91 12 15 0.00023 0.056 16.2 2.5 1 23 1579 1601 1579 1601 0.99 13 15 0.001 0.24 14.2 0.3 1 23 1736 1758 1736 1758 0.98 14 15 0.022 5.2 10.0 0.2 2 23 1908 1930 1907 1930 0.96 15 15 6.4 1.5e+03 2.2 3.1 2 23 2228 2251 2228 2251 0.89
Sequence Information
- Coding Sequence
- atgtattttaatgtttctccCACAGATCCCCGCAAAGACCACCAACAACAGCGCCAGCAGTTGTCCAACAGGGAGCAGCAGCACCATATCGAGAAGTCGGAGCAGGAACCGGAGGACACCATCATGACCAACTCTTCCAACCACCAACACATGTGCCCCTATTGCAACTACACGAGTAGCTCAGAGATGCGCATCCAGGCACACGTTCTCACCGCGCACGGTCATTCAGAGCCGTCGCCTCCTCCCCCCGCGAGGGCCTCTTCGCCCGTCAAAGACTTCCTATGCCCTCTTTGCCAGGATGGATTCCGGGACCGCGCGCAGCTCGAGGTACACGTCATGCAGATCCACAGTGTCAACAGCGAAGGTCTCCAAAGGTTGCTGCTACTGGTGGACCAGTCCCACTGGCTGAACGCCGTCAGTAGATCGTCGGCCCCTTCCACCCCACAATCTCAACCGACACCCCACCACCCCCAACACCATACACCTCCCGGATCCAACTCTCACCCCCATCACAACCAGATGATCTCACCCTCCTCCAGCTCAGCTGGATCCTCCAAAGAACTCGACTCCAGTGGGGGTAAACAGAACAACTCGGACGTAAACTCCATAGAGGACCGTGAAGATCATTCCCATCCGGACCTCATGTCCCCGTCTCCCGATGATCAGAGTGACGCGGATGAGAACCGTTGCCAGACGTGCTTCAAACTCTTCAGAAATATCGATGAACTGTGCGCGCACCAGAACGAGACTGGTCACCTTGAGATTAAGCAAACTCCGTCTGGGCCAGGCTATCTCTGTTGGAAGAAAGGGTGCAACCAGTATTTTCCGACGGCTCATAGTTTACAAATGCACTTCAGGGAGATACATTCTTCTAGAAGTTCAGGACTGACGCAGCAAGGTATGGCAGTCTCTGAGAAACATGTATACAAATACCGGTGCAATCAATGCAGTCTAGCGTTCAAAACGATGGAAAAACTTCAGCTCCATTCCCAATATCACCTTATAAGAGATGCCACCAAGTGTGTCCTCTGTGGTAGAAGCTTCAGGTCCGTCATTGCTTTACATAAACACGTGGAAACCTCTCACGCAGAACTGACAGATGAAGAGCTAGCGGCTTACAAACAGAGCTTAATGAATAACCCTTTGTTACTAGCCGGTTTCAGTGGACAAGTCCTTGACCCGTCGACGAACGAATTGCTCAAGAAAGAGAGCCTCAAGATGGACTCTGATGACTTGATAGATACGGATGAGAGTCCAACCAAAGACCACTCGCACAATCAGGATGACGGGATGGGAAACTCTCACAGCGGGGATGGGGAGAACAGCGACGACTCAGTGGTGTACAAAGAGCAGCAGTTCCTAGAGGATTACCTCAACAGCCAGGCCATCGCCGAGGATAGTTACAATGATCCTAACCGCAAGTACAAGTGTCATAGGTGCAAAGTTGCTTTCACAAGACAGAGCTACCTAACGAGTCACAACAAGACGCTCTTGCATCGTAAAGGAGAAAAGTTGAGCTACCCCATGGAGAAATATCTCGACCCCAACAGACCTTACAAGTGTGACGTTTGCAAAGAATCTTTCACACAGAAAAACATTCTTCTGGTTCATTACAACTCTGTAAGTCATCTTCACAAACTCAAGAGAGCGATGCAGGAACAACAACAACagcataataataacaataataataatggtgcgACATCTGTTTCTCCCGTCTCCGCAGCGGCAGCTCTCGCTGCAAGCTTGGGAGTTACGCCTCCACCAACCCCAAAATCCAGCAACATCTTGGATGATGATGACAAGAAACCTTACAAGTGTAACATCTGCAAAGTGGCTTATAGCCAAGGTTCCACTTTGGACATCCACATGAGGTCAGTTCTTCATCAGACCCGAGCATCTAAGCTCCAAGACCTCGCCATTAGTGGTCAGATTGATCTGAGCAAGCCTCTCATAGAGCAACCCGAGCCTCAGAAGATCCAAGACCAGCACAAGAAGATGCTTCAGGACATTCTAGGGACGTCCCCTAAACAGACGACGACGTCGCCAAGCTCCGGCGTGAACACGAGCAGCAGCAGCGTGACTTCGCAAGTGCCGTCTCTAGCCCAGGGGTCTCCTCCCGTCACGGGCAGTCATATAGTTCCTCAATCGTCTAGCGCTGCCGCTGTATCGGCTTCGACACCGACCATGACTTCAGTTCCTAGTAGCGTTATGCCTAACAACGCCACGACACCTAACTCGAGTACAACAAGCCACATCAACAACGCTCAAGTGCCGCCTGTGATAGCATCATCGCCCTCCCCTCAACACGGAATGCTCTCCTGCCAGAGGTGCAGTGCCCTTTTCGCCAACCAAGAGCAGCTGACCACGCATCAGCAGCTCTACTGTCTCTTTGGCAGTCCCATGAATATCTTCCCTCCAATGCCCACGCCAACTCAGGCATCGACCCAGACCCACCCTTCCCATTGTTCTCCTCAACCTTCGGGCCACAAAACACCCCCTCCAGTGTCCACGACCCCTCACCTTCAAGACGACCCTTTTCCTAGAGTGTCTGTGGGGAATAAGAAGCCCTCGCAAGTGTACAAACATCTTCTCGAGAGCTTCGGTTTCGATCTGGTCATGCAGTTCAACGAAAACCACCAGAGACGGCAAAGGAAAGAGAGGGAGGAAGATAACGAAGCCCCTCCTCCACCGATGCCGAGTTCCCTGACTACGCAACAGCCCGAAACCCAACCGGAAGGCGTTGTCGTGAAAATCGAGGTGGAAGACGTCCCCGAGCAAGATCTTCCAGAAGTGGCAAAGTCTGTGTGTCAGCATTGCCGAAAGGAGTTCTCCAGCGTGTGGGTTCTCAAAGCTCACTGCGAGGAGGTCCACAGAGACTTGGTACCCCCAGAGTTCCTGGAGAAATACGCGCAGCAGATCAAGTCAGAATACGAGAAGAAAGGGGCGAACGCCTCAGGGGCGCCCAGCGCTCCAGGACCTGTGATCCAGATCTCGACGAGCAGCAACACCGACGCTGTACCCGAAAAGGAACCCGAAGACAACAAAGAAGCGCTACACGCCAAAATGGGTTTGAGCCAACCCCAACAGCATAACCACCACCGGCAGGCCACTCCGCCCGTGAGGACGCCGCCTGCGCCTAGTACGCCCACGGCGTCGTCCACACCGGCGTCCAGCACCGATTCGATACCGGCGACGCTCTCAACGCCCATGGCTGTCTCGATGATGGGCTCCGCCAACAACGTCGCGTCCGGCAACCCCCAGAGCCTGTCCATGTCGCTGGCGCAGCAGATGAACGAGATGCAGGCGGCACTGAACGTCATGGCGGCGTCTCAGCTCCAACAGCAGCTGCAGCAGTTCAACCCCATGATGATGGGGATGGCAGGGCTTGGGATGGGGCTTCCCCTGGGGCTCAATATGAACGCTCTGGCGGCGATGAACCTCCAGCCGCCCCTGGTGCCCATGATGATGCCGCCCCCGCCCTTCGACACGATGAGTCTAGCGCAGGCGCAGAGCCCGCTGTTCTCACCGCAGGGCGGTGGCATGGACCATACATCCCTGCTTGCTAAGCAACAGCAACACCTCCTTCAACAACAACAGCAGGCGGTATCGGCGGCCCAGCAGAAGAGGGCAAGGACACGCATCACCGACGATCAGCTCAAGATCTTGCGTGCGCACTTCGATATCAACAACTCACCCTCCGAGGACCAGATCCACGAAATGGCGGGGCAGTCGGGGCTCCCCCCTAAAGTTATCAAACACTGGTTCAGGAACACCCTGTTCAAAGAGCGACAGAGAAACAAAGACTCGCCTTACAACTTCAACAACCCGCCGTCGACCACCCTCAACCTGGAGGAGTACGAGAAGACGGGAGAGACCAAGGTGATGCCACTCAACAGCAGCAGCAGTAGCAATGAAGACCAGAACCCTAAAGAGTTCTCCCAAAGAGCCCCGGCCGCTACCTTCCACCCCTTCCTCGTCCAACAAGAGGAAACAATCTCAACCCCAATCTTTGCCGCAGCCCCAGCCCTTTCCTCCAGAAATGATCAAGTTGGAGCCGAGAGAAAAAAAGACGTGGATATACCTGAAGATAAACCTCAGAACTTACGCCAACTTCCGAGCCCTTTATCAGGGATGGGGTGTTTGCCACCAAGCACCCCTACAATTAACGAATGTAATATTATGTCTACCACTACCCCTTTGAATGTGCGGACCTCCTCCCCTAGCAATTTGACCTTGACCTCTATCATCGCCTCTCAATTGGGTTCAGACTCCATCACCACTTCTCACCCCAATATGGGGATGAACTTGACCGCTGTGAATTCATCTCAAAACACGAGTGCTAGTCGGTCAGCCCCGGCAGATCCTACAACAACAACTCTTCTGGATGGCTTTGGGCATGGGGTTCTCGGGGGCGGCTGTGGAACAGGTGGGAATAGTAACGGGAGCAACTCCTCAGGAGGGTCGTCGGGAAAGCGTGCCAATAGGACTCGCTTCACGGACTACCAGATCAAAGTACTTCAAGAGTTCTTCGAGAACAATGCGTATCCCAAAGATGATGACTTGGAATACCTCTCAAAGCTGCTGAGCTTAAGTCCTAGGGTTATTGTAGTCTGGTTTCAGAATGCACGCCAGAAAGCGAGGAAGGTGTACGAAAACCAACCCCCTGTTGAAGCGCCACCTGGCGTCGATGAGACTGGTGCGAATAGGTTTCAAAGAACCCCTGGGCTAAACTATCAGTGCAAGAAATGTTTGCTAGTTTTCCAGAGGTACTATGAACTCATCAGGCATCAGAAAACGCACTGTTTCAAAGAGGAAGACGCAAAGAGATCCGCACAAGCTCAAGCGGCAGCAGCGCAAATCGCTGCCGTTCTTTCGTCGGAAGATTCGAACTCTAGTACAATTGCTGAACAGAGTCAACAGCAACCGCAACAACAACCACAACATCAACAATCGccacatcatcatcaacaatcGCCGCACCATCATCAACAACATCAGCAGCACCAACAACAACCCCCACCCTCTTCGACGTCTCAATCACATCAACAACAACAGACTAACATGGTTTCTGTATCAACCGCGTCGGGTAACCCTGCCACCCCTCCTGGCTCAGTAACACCCACCCCAGCCTCATCATTGTTCCCGTCCTCCCCAATCGCAAGTACTCCTACCTCCACAGATAACTCCAGCAAAGAAGGTACCTTTCAATGTGACAAGTGCAACCTCGTGTTTCCTCGGTTCGATCTCTGGAGAGAACATCAACTCGTTCATATCATGAACCCAAACTTGTTTCCTACGTATCCTCCTGACAGCCCTTTCGGAATATTACAGCAACATGCCCAGATACAACAGCAGCAGCATTTGGCCGGCTTGGGGGTGGCTGATCTCTCCATGAATTCCTCCTCCACCCCTCCCCATCAACATCCCCTAGCGTCGATGCTGTCTAGCAGCAAGCGAAAGTATGAGGACTACGAAGATGTGATGGATAGAGATGGCGATCAACCCAAAGACAAGAGACTTCGAACCACGATCCTCCCTGAACAGTTGGATTACCTTTATCAAAAATATCAGCTGGAAAGCAACCCGTCTCgaaaaatgttggaaaatatAGCTAGAGAGGTAGGTCTGAAGAAAAGGGTGGTCCAAGTCTGGTTTCAAAACACCCGAGCCAGGGAACGAAAGGGTCAGTTCAGAGCGCACGCCCAAGTGATCAACAAGAGGTGCCCCTTCTGTCCCGCTCTGTTCAAGGTAAAGTCTGCCCTTGAATCCCACCTAGTCACGAAACACGCGGATCAATGTACTAGGGGAGAGATAAACATTGACGCTCTGCCCGACGAAGAACTAAGCATGGAATCCGCGCcgtccttcagctcccagatgGGCGACAGCGTTAAAGTTCCTACGAGTTTTGGATCTAACAATCCGACGCCGAACATGATGCCCCCGCTGTTCCCACCTTTCCACTCAGCCGATATGGAAAGTTCACTGAAAAAGTATTATGAAGAATCGATGAAGCGTTATCTCAACGAGCTTCAAGCGCATCACGTGGCTCAGAACGGAGGTATAGGAAAGGAAGGAATACACATTCCTACAGATCTCAGCATGAAGATAAAGCAGGAACCTTCTTTATCGGAAGTAGTAGGAGACAGAGGGGGCAGCGCTTGTGGAGCAGATGGTCCGCTTGATCTCAGCAAACCAGTGGACTTGAGCCGACCTATGAAAGTGTCCATGGATCATGAGATGAGATCAATGATGGCGGAACAAGGCCCTTTAACTGACCTGAGTGAAAGGAGCATCTGCTACGACGATGACAGCGCCTCGGAAACCACTGAAATTATGGACGGCGATGAGAGTAACCCAACTTCGCCCGCCTCAAGTACACAAAGTGGTCAACAAAGGCATTCCACCTCTGGGGGTGGAAGCAGTGGTGGTGGAAAGAGATTTCGGACGCAGATGAGCAGTTTGCAAGTAAAGGCTATGAAATCTCTCTTTTCTGACTATAAAACTCCCACTATGGCGGAATGTGAAATGCTCGGAAGAGAAATAGGCCTTCCGAAAAGGGTGGTCCAAGTTTGGTTCCAGAATGCCAGGGCTAAGGAGAAGAAGAACAAGCTCGCACTTCAGAAGGTTCTGGGAGGTCCTGAACAACCTATCCAAGAGGGATCTCGGTCGCCCGAGGAGTGTAAGCTCTGCTTGTTCAAGTACTCGCACAAGTACTCAATCCAGGACCACATCTTCACCAAGAAGCATATCGACAACGTAAAGGCGCACATCGAGAGCGGAAAAGCCGCGGCGGATAATTCTGGCAACACCAGCGACGGAGGTTCCGTGGCGGGGGAGTTCACAGTCCCACCGGTCCCAGGGCTGTCCGGGGTTGGCGGCGACGTCACCGTCCCGCCCCCTACGCAGTCTCCTCAGTTCAACAACAACCAACAACAGCTGGCGCAGCTCCAGATGCTTCAGATGGCTGGCCTGTCCCTGCCCAACTCGCTGTCGGCGCAGGCGATGGCTGCCGCGGCTTCTGGGGTCAAGGTGGAGAAGGACTCAGGGTCCAAGTCACCGGCTCCGGGAGGGGTTCCGGGTCCGGAGGATATGGCGCTGCTACATCAGCTGTATGGACTGGGTCTGGCCGGATTCCCCGGAGCGGGCAACCTGTTCCTTCATCCCGCCATGTTCTCTGCTGCCGGTAAGTTGCTATTACAAGTCTTCCTTAGTTCCGTAAACCTTCAGAGCAGGATGCTTGGAATACCCTCAGAGCCCTATATTTGTCGCCAGAAAGTTCGTAAACTGTTATGA
- Protein Sequence
- MYFNVSPTDPRKDHQQQRQQLSNREQQHHIEKSEQEPEDTIMTNSSNHQHMCPYCNYTSSSEMRIQAHVLTAHGHSEPSPPPPARASSPVKDFLCPLCQDGFRDRAQLEVHVMQIHSVNSEGLQRLLLLVDQSHWLNAVSRSSAPSTPQSQPTPHHPQHHTPPGSNSHPHHNQMISPSSSSAGSSKELDSSGGKQNNSDVNSIEDREDHSHPDLMSPSPDDQSDADENRCQTCFKLFRNIDELCAHQNETGHLEIKQTPSGPGYLCWKKGCNQYFPTAHSLQMHFREIHSSRSSGLTQQGMAVSEKHVYKYRCNQCSLAFKTMEKLQLHSQYHLIRDATKCVLCGRSFRSVIALHKHVETSHAELTDEELAAYKQSLMNNPLLLAGFSGQVLDPSTNELLKKESLKMDSDDLIDTDESPTKDHSHNQDDGMGNSHSGDGENSDDSVVYKEQQFLEDYLNSQAIAEDSYNDPNRKYKCHRCKVAFTRQSYLTSHNKTLLHRKGEKLSYPMEKYLDPNRPYKCDVCKESFTQKNILLVHYNSVSHLHKLKRAMQEQQQQHNNNNNNNGATSVSPVSAAAALAASLGVTPPPTPKSSNILDDDDKKPYKCNICKVAYSQGSTLDIHMRSVLHQTRASKLQDLAISGQIDLSKPLIEQPEPQKIQDQHKKMLQDILGTSPKQTTTSPSSGVNTSSSSVTSQVPSLAQGSPPVTGSHIVPQSSSAAAVSASTPTMTSVPSSVMPNNATTPNSSTTSHINNAQVPPVIASSPSPQHGMLSCQRCSALFANQEQLTTHQQLYCLFGSPMNIFPPMPTPTQASTQTHPSHCSPQPSGHKTPPPVSTTPHLQDDPFPRVSVGNKKPSQVYKHLLESFGFDLVMQFNENHQRRQRKEREEDNEAPPPPMPSSLTTQQPETQPEGVVVKIEVEDVPEQDLPEVAKSVCQHCRKEFSSVWVLKAHCEEVHRDLVPPEFLEKYAQQIKSEYEKKGANASGAPSAPGPVIQISTSSNTDAVPEKEPEDNKEALHAKMGLSQPQQHNHHRQATPPVRTPPAPSTPTASSTPASSTDSIPATLSTPMAVSMMGSANNVASGNPQSLSMSLAQQMNEMQAALNVMAASQLQQQLQQFNPMMMGMAGLGMGLPLGLNMNALAAMNLQPPLVPMMMPPPPFDTMSLAQAQSPLFSPQGGGMDHTSLLAKQQQHLLQQQQQAVSAAQQKRARTRITDDQLKILRAHFDINNSPSEDQIHEMAGQSGLPPKVIKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYEKTGETKVMPLNSSSSSNEDQNPKEFSQRAPAATFHPFLVQQEETISTPIFAAAPALSSRNDQVGAERKKDVDIPEDKPQNLRQLPSPLSGMGCLPPSTPTINECNIMSTTTPLNVRTSSPSNLTLTSIIASQLGSDSITTSHPNMGMNLTAVNSSQNTSASRSAPADPTTTTLLDGFGHGVLGGGCGTGGNSNGSNSSGGSSGKRANRTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLSLSPRVIVVWFQNARQKARKVYENQPPVEAPPGVDETGANRFQRTPGLNYQCKKCLLVFQRYYELIRHQKTHCFKEEDAKRSAQAQAAAAQIAAVLSSEDSNSSTIAEQSQQQPQQQPQHQQSPHHHQQSPHHHQQHQQHQQQPPPSSTSQSHQQQQTNMVSVSTASGNPATPPGSVTPTPASSLFPSSPIASTPTSTDNSSKEGTFQCDKCNLVFPRFDLWREHQLVHIMNPNLFPTYPPDSPFGILQQHAQIQQQQHLAGLGVADLSMNSSSTPPHQHPLASMLSSSKRKYEDYEDVMDRDGDQPKDKRLRTTILPEQLDYLYQKYQLESNPSRKMLENIAREVGLKKRVVQVWFQNTRARERKGQFRAHAQVINKRCPFCPALFKVKSALESHLVTKHADQCTRGEINIDALPDEELSMESAPSFSSQMGDSVKVPTSFGSNNPTPNMMPPLFPPFHSADMESSLKKYYEESMKRYLNELQAHHVAQNGGIGKEGIHIPTDLSMKIKQEPSLSEVVGDRGGSACGADGPLDLSKPVDLSRPMKVSMDHEMRSMMAEQGPLTDLSERSICYDDDSASETTEIMDGDESNPTSPASSTQSGQQRHSTSGGGSSGGGKRFRTQMSSLQVKAMKSLFSDYKTPTMAECEMLGREIGLPKRVVQVWFQNARAKEKKNKLALQKVLGGPEQPIQEGSRSPEECKLCLFKYSHKYSIQDHIFTKKHIDNVKAHIESGKAAADNSGNTSDGGSVAGEFTVPPVPGLSGVGGDVTVPPPTQSPQFNNNQQQLAQLQMLQMAGLSLPNSLSAQAMAAAASGVKVEKDSGSKSPAPGGVPGPEDMALLHQLYGLGLAGFPGAGNLFLHPAMFSAAGKLLLQVFLSSVNLQSRMLGIPSEPYICRQKVRKLL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01444540;
- 90% Identity
- iTF_01445137;
- 80% Identity
- iTF_01446318;