Tdou021236.1
Basic Information
- Insect
- Timema douglasi
- Gene Symbol
- RERE
- Assembly
- GCA_901482245.1
- Location
- CABEEJ010001911.1:16306-62133[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-08 0.00014 24.2 0.4 2 45 126 170 125 171 0.82
Sequence Information
- Coding Sequence
- ATGGCCTCCACCCAGGGCGAAATTCGTGTAGGCCCTTCACATCAGGCTCGGTTGCCAGAATACCGGCCTGGAATGGTATTAAATTCAGAAGTATGTGATCTACCTGCAGACGCAGACATGGAGAAGGAGCGAGAAGAGCTGCGGTGGCTACCTGCCATGACACTTGATGGGGATCTACTTATGTACTTGCGTGCGGCTCGCTCTATGGCTGCATTCGCAGGCATGTGTGATGGGGGTTCCCCTGATGATGGATGTGTAGCGGCTAGCAGGGATGACACAACCATTAATGCATTGGATGTCCTTCATGATTCCGGTTATGACCCTGGAAAAGCTCTTCAAGCTCTAGTCAAGTGTCCAGTGCCTAGGGGTGTAGACAAGAAGTGGTCAGAAGAAGAAACGAAACGTTTTGTTAAAGGCTTACGCCAATATGGAAAGAATTTCTTCAGAATTAAGAAAGAGCTGTTGCCACATAAGGATACGCCAGAATTAgtggaattttattatttatggaaGAAAACCCCTGGGGCAAACAATAACAGACCACATCGTCGCAGACGTCCTGGTTCTCTTCGCCGGATACGAAATACCCGCAATACAAATAGAGGGCAACCTAAAGAAATAGATGTAAACTCGTCTGCACGCTCACGGGACTTAAATAGTGGAAAAGATCGTAATAAAATATGCACAGATTGTCTTGCATACTTGAAGAAGTACGGAGAGCTTCCACAAATACAATCTGTCGGTATTACTAATGCAAATGGAGGGACTGCTAACAGTAATAGGGGGGAGGCTCCATACCTCTTTCGGCCTGTTCAAACGGAATCATCTGATCACTCTCCAGGTAGAATGCGAACAAGATTCAGGACTAAAGAGCAgTTTAAAATTGAGCATCCAGCTAAAGGGCGTAAAAGAAACCAAGTTGAAATGGACAATGATGGTGATAAAGAAATCACTTTATTCAAGAGGAAAAGAAGCGATAGAGCTGATagtCCTGCTGAAAGTCTTACCACTGATAGTGGCTCTATTGTGGATGATGGTGAGAACAATGAACCAGAGAATGAATCTCAAGATATTTCAAATGGCAATATAAACATAACCGCATTAAATCCATTGAGCTGCATTAGTTCATCAGCAGTGacacttccttcaccttcaTTGACATCTTCAACTATCGGAACAACACGAGTTTCAATTGCAGCGAATCTTATTTCTCCATCACCATCATCTCGCCTTACTCCAACATCTCTATCTAGTGGGCCAACTTCAATTCCACAACCTGTGATGCATCCATCCCAGCAGGCATCACCTTTAACTTTACATCCTCATCATCCCCACCACTCTCTCATCCACCACCAACTGTTTGCTGCAGCAGCTGCTCATGCTGCTGCTGTTCATCATCCCTACCATCCACACCACCCTTATGCTGCTTATGGTTATCCATTTCCATACCCATATGGTCCTCCAATGCCACAACCCCATCCAGTACCCCCACCTCATCACACAGCCCATACTGCTCCATCTCTTCCTATACAGTCAACATCTGGCAACCATGGACATCGTTCTTCACATGAACAGGCCAAATTGGAGTCTAGAATATCAACCTCTTCAGCCTTGGAAAGTACAACTACTTCACTGCATTCATCTCACCATTCTTCGCTTTCATCAGTGACCACAAGACGGGAAATTTCAGCCACATCTGAAGAATCTAGTAGCTGCAACTCCATTGGAACATCTGAGAAACACCATCATCACTCACAGGAATTAACTACAACTCATCATCACCACTCTTCACATCACTCATCCGTTCATCATCAGATTTCTACAGAGAAGCAGTTAACCCACCACAACCAAACTCCTGTAAATCACTCAATGACAATCTCTCACTCATCCACATCATCAAGCTCTGCTTCTGTGCAGCACAAAATTAACACTGGGGGCAAAGTAGCTATTACTGCTCGTGTCTCCAGTCCTTCTTGCCATGTTTCTGCCACCCTCTCATCAACAACGTCAGCTTCCACGTCTATATCTCTCCCTTCCTCCAACCATGGCAATCACCACCACTCTCACCATCACTCACATAGTCACCATCACCAACACCATCAGTTAGGACCTGGAGATCGACTCTCACCATCTACTGCCATGATCATGCCGCCTGGGCTTAATGTGCCGATAGGGATGGGGCCAAACAATTCTAGCTCCAATCGAACCTATCACAGTGGTTTATCTAGTCACCCAAACTATAACAACAGTCACCCCCATCATTCAAAGCAAGGCAGGAACACTCCAACAAATAATCCACCTCTTCATCACCATCTTTCCAACCACCCCAGTCTCATAGCCCAACCGGGCATGCAGCCTGCATTGGCTCATCACACCATGGGTATAGGATTGAATCCAGCTTCCATACCAGGATCATCTCTGGAAGCTTTGCGAGCCCATGCCCAAGCAGCTGCTAGCATTCAACAACAGCAGGGATCATTGCCACCTGGAATGATCCATCCGCCTTCTCACTCTCCTTTGCAAGGTCCACAAGGACATTCTGGAGCTGGTTCACATCATCATTCTGCTCGCCACTTGCCTTCGGGGTTGTCTGAAGATGTCAAATCAGAACCCCTAAGTAGTGATATGCTAGAACAACCTATGGGGGTGTCTCAACAAGAAGATGATGAAGTTCCTAGTCCAAATCATATTCCACGAGGGCCAAGCCCAGAGCCCAAGATAGAGGATGTAGAATGCCATCGCAGCCAAAGTGCAATtttccTTCGACATTGGAATCGTGGTGATTTTAATTCATGCACACGTACTGATCTTACCTTTAAACCAGTGCCCGATTCCAAGTTGGCTAGAAAACGTGAAGAACGATTTCGCAAACAGGCTGAAAGAGAACGGGaggaaagagaaaaagtagCTTCATTGGCACAGTCTCGGAAAATTACAACACCTGACAAACCAGAAGGACACAAACCTCCCTCACGGGGACCAATTGAGACTGTCACATCTCCGTATGATAGATTTAATTCACGCCAGGGCTACCCAGACACACCTGCACTTCGTCAACTAAGTGAGTATGCTAGGCCTCATGCCGGGTTCTCCCCAGGAACCTTACCTCGTTCCGCGGGTCTTGGTTTGCCACCGCAATGCATAGATCCTATGCTACATTATCAACTAAACAGTATGTATGGAGCTGGTGCTCGTGAAAGacttgAATTGGAGCATTTGGAACGAGAGAAACGAGAAAGAGAAATTCGTGAATTAAGAGAACGGGAGCTTAATGATCGCCTTAAAGATGAGCTAATGAAGAATGCTGGAGCAGGTCCACGCATGGCAAATCCAATAGATCCACATTGGCTAGAGCTTCATAGAAGGTATGGTCTAGGTCCAGGTGGTCCTCAAGGAGCAGCTGCTCTCCATCAATTTGGTCTCTACTCGCCTGGTAATGGACCAAGTCAGGCTGCTCTGAGTCAAATGGAAAGAGAGAGACTAGAGAGATTAGGCATTCCAACAGGTCCTAATGGCCCACATGGCCCCCCCTCAGTTGGACCCTCGGGGCCTCACTCCCATCCTCATCCAAGCTCAGTAGCAGCAGCTCAATTAGAAGCAGCAGAGCGACTAGCCCTCGCAACAGACCCGATGGTGCGCCTTCAGATGGCTGGAATATCTCCTGAATACCATGCCCACACTCATGCCCACACTCAcgcacactcacacacacaccttcACCTCCATCCTAGTCAGCAGGCACAGCAGGCTCAAGCACAACAGGAAGCAGCAGCAGGCTCTTCTGCAGGCTTTCCTTTACCAGcctctGCTGCATCAGGCTACCCACGTCCAAGTATTCTACCCCCTAGAGAAACAACCTTGGGTATGCACCACCCTTCTGAACTTCTTGGGCGAGGACCAGGCTATGCAGACCAACTAGCCCATCAGGTGTGTATACCACACTTTGCTTACGAATGA
- Protein Sequence
- MASTQGEIRVGPSHQARLPEYRPGMVLNSEVCDLPADADMEKEREELRWLPAMTLDGDLLMYLRAARSMAAFAGMCDGGSPDDGCVAASRDDTTINALDVLHDSGYDPGKALQALVKCPVPRGVDKKWSEEETKRFVKGLRQYGKNFFRIKKELLPHKDTPELVEFYYLWKKTPGANNNRPHRRRRPGSLRRIRNTRNTNRGQPKEIDVNSSARSRDLNSGKDRNKICTDCLAYLKKYGELPQIQSVGITNANGGTANSNRGEAPYLFRPVQTESSDHSPGRMRTRFRTKEQFKIEHPAKGRKRNQVEMDNDGDKEITLFKRKRSDRADSPAESLTTDSGSIVDDGENNEPENESQDISNGNINITALNPLSCISSSAVTLPSPSLTSSTIGTTRVSIAANLISPSPSSRLTPTSLSSGPTSIPQPVMHPSQQASPLTLHPHHPHHSLIHHQLFAAAAAHAAAVHHPYHPHHPYAAYGYPFPYPYGPPMPQPHPVPPPHHTAHTAPSLPIQSTSGNHGHRSSHEQAKLESRISTSSALESTTTSLHSSHHSSLSSVTTRREISATSEESSSCNSIGTSEKHHHHSQELTTTHHHHSSHHSSVHHQISTEKQLTHHNQTPVNHSMTISHSSTSSSSASVQHKINTGGKVAITARVSSPSCHVSATLSSTTSASTSISLPSSNHGNHHHSHHHSHSHHHQHHQLGPGDRLSPSTAMIMPPGLNVPIGMGPNNSSSNRTYHSGLSSHPNYNNSHPHHSKQGRNTPTNNPPLHHHLSNHPSLIAQPGMQPALAHHTMGIGLNPASIPGSSLEALRAHAQAAASIQQQQGSLPPGMIHPPSHSPLQGPQGHSGAGSHHHSARHLPSGLSEDVKSEPLSSDMLEQPMGVSQQEDDEVPSPNHIPRGPSPEPKIEDVECHRSQSAIFLRHWNRGDFNSCTRTDLTFKPVPDSKLARKREERFRKQAEREREEREKVASLAQSRKITTPDKPEGHKPPSRGPIETVTSPYDRFNSRQGYPDTPALRQLSEYARPHAGFSPGTLPRSAGLGLPPQCIDPMLHYQLNSMYGAGARERLELEHLEREKREREIRELRERELNDRLKDELMKNAGAGPRMANPIDPHWLELHRRYGLGPGGPQGAAALHQFGLYSPGNGPSQAALSQMERERLERLGIPTGPNGPHGPPSVGPSGPHSHPHPSSVAAAQLEAAERLALATDPMVRLQMAGISPEYHAHTHAHTHAHSHTHLHLHPSQQAQQAQAQQEAAAGSSAGFPLPASAASGYPRPSILPPRETTLGMHHPSELLGRGPGYADQLAHQVCIPHFAYE*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01444727;
- 90% Identity
- -
- 80% Identity
- -