Tdou012555.1
Basic Information
- Insect
- Timema douglasi
- Gene Symbol
- TRERF1
- Assembly
- GCA_901482245.1
- Location
- CABEEJ010000844.1:114487-126622[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.4e-11 2.8e-07 32.8 0.1 2 46 116 160 115 160 0.96
Sequence Information
- Coding Sequence
- atgggatacacccgccgcgTCGGCAAGGCCCACCAACAGAAGACCCTAAAGAAGACAGCGGCAACCAAACAATACTTCACCCATGGACCCATCTTCTACGATCCCGACTGCAACCAACAGACCCCCGAACGCCAACACTCCGCTCCAACATCTCCAAGAATGGACATGTACCTGGAATTTGCGTGTTGTGCCGCTGTGCCAGGCGGTGGGCGAAATAAAGAGTATGCCTTACACTTGCTACACATGTGTCATGGAAACATTCATGAGGCAATGTTAAAGTTAATGCAACCTACCCCCTTTTTACCTTCGGGCCACCCTTTGCTTGCATACGACTACTGTGAGAGCGATCGGTGGAGTGCGGATGAGATGGATTCCTTCCACCAAGGCTTGCTGAAACATGACAAGGACTTCCTTAGCATCGCACAGGAGATTGGCTCCAAGACGATAAAACAGTGTATCCAGTTTTACTACCTTTGGAAGAAAGTTTGTCCCGAGGAGTACAAAAGGTTACGTCTGATTAGACGAAGACAGAATGCAGACTATGATTTTGATGATATTAAAATGGAGGAGCCTCGATATAGCATTCCTGCCAATGATGTCGAGCTGGTGTCAACAAGTTCGGAAACCAGACTCTTTGTCTGTGAATATCCGGATTGCTCAGCAAGTTTCAACTCACGGGCCGCACTGAATGGTCATATTCGTATCCACGGTGGGGGTGTGTGTGGCCGTTCTCCCACCCCGGACAAGCGGCCAGCGACCGCAACACCCCCTGCCCTTGGCGACCTTCTCGAGGAATTTCCTTGCAAGATATGTGGGAAAGTGTTCAACAAGGTGAAAAGTCGCAGCGCCCACATGAAATCACACAGGCCACCTGATGCAGAGCCCAAGAAACCTAAACTTGACCCTCACAAAATGGAGGCAGCCGAGCAGACATTGGGTAGGGCCATGTGCGTGTCCTCAACCATTGGGGGAGGCGGGGGACGCCACCCCTGA
- Protein Sequence
- MGYTRRVGKAHQQKTLKKTAATKQYFTHGPIFYDPDCNQQTPERQHSAPTSPRMDMYLEFACCAAVPGGGRNKEYALHLLHMCHGNIHEAMLKLMQPTPFLPSGHPLLAYDYCESDRWSADEMDSFHQGLLKHDKDFLSIAQEIGSKTIKQCIQFYYLWKKVCPEEYKRLRLIRRRQNADYDFDDIKMEEPRYSIPANDVELVSTSSETRLFVCEYPDCSASFNSRAALNGHIRIHGGGVCGRSPTPDKRPATATPPALGDLLEEFPCKICGKVFNKVKSRSAHMKSHRPPDAEPKKPKLDPHKMEAAEQTLGRAMCVSSTIGGGGGRHP*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01450068; iTF_01447098; iTF_01449568;
- 90% Identity
- iTF_01450068; iTF_01447098; iTF_01449568;
- 80% Identity
- iTF_01447098;