Tdou055146.1
Basic Information
- Insect
- Timema douglasi
- Gene Symbol
- SNAPC4
- Assembly
- GCA_901482245.1
- Location
- CABEEJ010017186.1:1-2012[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.39 1.7e+03 1.5 0.2 2 17 142 157 141 171 0.87 2 5 0.24 1.1e+03 2.2 0.1 3 19 261 277 259 289 0.88 3 5 2e-12 8.7e-09 37.7 0.1 1 45 371 417 371 418 0.95 4 5 7.2e-13 3.2e-09 39.1 0.2 1 43 424 470 424 472 0.96 5 5 1.4e-16 6.2e-13 50.9 0.0 1 46 479 524 479 524 0.97
Sequence Information
- Coding Sequence
- ATGAATAACAACACGGAAAGTAAGAATGGTGCCGAAATGACAACTCCACTAGAAGTTGAAATATGCTTCCTTGAAGGTGACCAAAACCCAATTACTTTTGAACCCACATATGGTGGCCCACCAATCGACACGCCCCCTGTGATTAAAAGAAAGCCGGGTAGACCTCCTAACGTTAATAAAAGAACTACAAATGGCAAGGCTCCGAAAGAAACGAGCGTATGCTTGGATGATGAAAAAACAGAAATACTCTTCCCTGTCCAGAAAACGCAAGCCGTGCCTAAGAAAATGCAAGGTACTACGTCTAAACAATATTCCTCTAAAAAGAGTAGCCCAAAAAAAGTATGTCTTATTACTTCCATTGAGAATGATGCTTGCTTTGATGGCAACAAAGAAGAATTGAAGTCTCCTGACCGGAAAGATGAAAATCCTTTTACATTGGATgaacttaacaaattaattgagctTCGGGAAGAGGAAATCGCCTCCTTGAAGAAATGGGACGCACTCCTATCAGAAACTAGCGTCCGTATAGTCAACGAAAAGGAGAAGTGCTACCAAGAAGAGAAGGAGCTCCTACAACACTTTGCAAAGAACAAACCTCTGAGACTGAGACATAAACCTGCAAACGATGTAACATTTTTTGCCAAAGACAGTTGGGTTTACCTATACGGGGCCCCATACTTCAAGGATGGCAGTTTTTTCCCGGCCCCTCCTAACCATGACGTCCAGCTGAAGAAAGCCAGGAATGAGATTAATATTATAGACATTTCCCAGGCCAGGAGATGGAAAGCCCAAGATAagactattttggaaaaagcgGTAAAGAAACAGGAAATTGAGAAACTACTTGTCAAAAACAAAACGGATCAGCTTACCttattggaaaatttaaaacaatgtccGGGAAAAGACGAAATAACTTTACAGGAAAAATTGGACGACCTAAAGGCTACAGCTGATGAGATTAGCTCTCGGTCGCTGGCAGATTTAGTAGGCGACAAGTGGGTGGAATATGACTGGATGAGGATTTCAGTGACAGACTTTAAGAACCAGCACACTCCAGAAGAGTGCCGCGGAATGTGGTTTGGCTATATTCATCCCGCAATTGTTCGATCTCCATGGACCCATCAAGAGGATATGCGTCTCAAAGAAGTTGCATTGAGCTACAAATGTCAGGATTGGGAAAAAATTGCAGAGGATATGGGGACAGGCCGCACCGCGTATCAATGCATGTGTCAATATCAGATGCGACTGAATGAAAATTTGAAGCGTGGAAAGTGGACAGATGAGGAAGACAGATTGGTGAAGCAGGTGGTGGCAAGATATCGTGTTGGTTCTCATATCCCTTGGGCCAAAGTAGCTATACATATCCCGGACAGGACCAAGGTGCAGGTTTTCAACCGCTGGAAGTATTCCATTGCACCTCACATCAAGAAGGGAAGGTTTACTTCTGAAGAAGACCAGATGATCATAACTGCCGTGCAACGTTATGGCAGAAACTTCAAGCAGATTGCAAGGTTTCTGCCTGATAGGACACCCATTCAAATCCGTGACCGATATAACTCAAATTTGCAGTACCTTGATCAAAAG
- Protein Sequence
- MNNNTESKNGAEMTTPLEVEICFLEGDQNPITFEPTYGGPPIDTPPVIKRKPGRPPNVNKRTTNGKAPKETSVCLDDEKTEILFPVQKTQAVPKKMQGTTSKQYSSKKSSPKKVCLITSIENDACFDGNKEELKSPDRKDENPFTLDELNKLIELREEEIASLKKWDALLSETSVRIVNEKEKCYQEEKELLQHFAKNKPLRLRHKPANDVTFFAKDSWVYLYGAPYFKDGSFFPAPPNHDVQLKKARNEINIIDISQARRWKAQDKTILEKAVKKQEIEKLLVKNKTDQLTLLENLKQCPGKDEITLQEKLDDLKATADEISSRSLADLVGDKWVEYDWMRISVTDFKNQHTPEECRGMWFGYIHPAIVRSPWTHQEDMRLKEVALSYKCQDWEKIAEDMGTGRTAYQCMCQYQMRLNENLKRGKWTDEEDRLVKQVVARYRVGSHIPWAKVAIHIPDRTKVQVFNRWKYSIAPHIKKGRFTSEEDQMIITAVQRYGRNFKQIARFLPDRTPIQIRDRYNSNLQYLDQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -