Tdou051141.1
Basic Information
- Insect
- Timema douglasi
- Gene Symbol
- -
- Assembly
- GCA_901482245.1
- Location
- CABEEJ010011868.1:7129-8514[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.012 2.2e+02 4.2 0.0 57 73 23 39 14 43 0.86 2 12 0.26 4.9e+03 -0.1 0.0 58 73 52 67 48 72 0.87 3 12 0.053 9.9e+02 2.1 0.0 58 70 80 92 70 97 0.80 4 12 2.9 5.4e+04 -3.4 0.0 58 70 136 148 132 150 0.75 5 12 0.0032 60 6.0 0.1 58 73 159 174 153 178 0.87 6 12 0.012 2.1e+02 4.3 0.0 57 73 186 202 176 208 0.86 7 12 0.045 8.4e+02 2.4 0.0 58 74 215 231 204 235 0.86 8 12 0.032 5.9e+02 2.9 0.1 58 72 243 257 234 261 0.83 9 12 0.011 2.1e+02 4.3 0.0 58 73 271 286 260 290 0.85 10 12 2.8 5.2e+04 -3.4 0.0 59 73 300 314 298 315 0.83 11 12 0.27 5e+03 -0.1 0.0 58 73 355 370 346 372 0.84 12 12 0.59 1.1e+04 -1.2 0.0 58 73 411 426 407 428 0.87
Sequence Information
- Coding Sequence
- ATGTCCCAGTACCTCCATCTATCAAGGAATGTCCCAGTACCTCCCTATATCAGGGAAAGTCCCAGTACCTCCATCTATCAGAGAATGTCCCAGTACATCCATCTATCAGAGAATGTCCCAGTACATCCATCTATCAGGGAATGTCCCAGTACCTCCATCTATCAGGGAATGTCCCAGTACCTCCATCTATCAGAGAATGTCCCAGTACATCCATCTATCAGGGAATGTTCCAGTACCTCCATCTATCAGAGAATGTTCCAGTACCTCCATATATCAGGGAATGTCCCAGTACCTCCATCTATCAGGGATTGCGCTAGTACCTCCATCTATCAGGGAATGTCCCAGTACATCCATCTATCAGGGAATGTCCCAGTACCTCCATCTATCAGAGAATGTTCCAGTGCCTCCATATATCAGGGAATGTCCCAGTACCTCCATCTATCAGGGATTGCGCTAAGGTATTGTTCCAGTACCTCCATCTATCAGAGAATGTTCCAGTACCTCCATCTATCAGAGAATGTACCAGTACCTCCATCTATCAGTGAATGTACCAGTACCTCCATCTATCAGAGAATGTCCCAGTACATCCATCTATCAGAGAATGTACCAGTACCTCCATCTATCAGAGAATGTACCAGTACCTCCATCTATCAGGAAATGTTCCAGTACCTCCATCTATCAGAGAATGTACAAGTACCTCCATCTATCAGAGAATGTTCCAGTACCTCCATCTATCAGAGAATGTTCCAGTACCTCCATATATCAAGGAATGTTCCAGTACATCCATCTATCAGTGAATGTACCAGTACCTCCATCTATCAGAGAATGTCCCAGTACATCCATCTATCAGAGAATGTTCCAGTACATCCATCTATCAGGGAATGTCCCAGTACCTCCATCTATCAGGTATTGTTCCAGTACCTCCATCTATCAGAGAATGTACCAGTACCTCCATCTATCAGAGAATGTACCAGTACCTCCATCTATCAGGGAATGTTCCAGTACATCCATCTATCAGGGAATGTGCCAGTACCTCCATCTATCAAGGAATGTTCCAGTACCTCCATCTACCAGGGAATGTCCCAGTACCTCCATCTATCAGAGAAGGTTCCAGTACCTCCATCTATCAGGTATTGTTTCAGTACCTCCATCTATCAGGGAATGTACCAGTACCACCATCTATCAGTGAATGTACCAGTACCTCCATCTATCAGAGAATGTCCCAGTACATCCATCTATCAGGGAATGTGCCAGTACCTCCATCTATCAGAGAATGTCCCAGTACCTCCATCTATCAGGGATTGCGCTAGTATACCAAACAGTTCATTAAAAGGAGTATATTTACCGGCGATATTCCAAGTGCACACATCTCTAAATCTTTATTAA
- Protein Sequence
- MSQYLHLSRNVPVPPYIRESPSTSIYQRMSQYIHLSENVPVHPSIRECPSTSIYQGMSQYLHLSENVPVHPSIRECSSTSIYQRMFQYLHISGNVPVPPSIRDCASTSIYQGMSQYIHLSGNVPVPPSIRECSSASIYQGMSQYLHLSGIALRYCSSTSIYQRMFQYLHLSENVPVPPSISECTSTSIYQRMSQYIHLSENVPVPPSIRECTSTSIYQEMFQYLHLSENVQVPPSIRECSSTSIYQRMFQYLHISRNVPVHPSISECTSTSIYQRMSQYIHLSENVPVHPSIRECPSTSIYQVLFQYLHLSENVPVPPSIRECTSTSIYQGMFQYIHLSGNVPVPPSIKECSSTSIYQGMSQYLHLSEKVPVPPSIRYCFSTSIYQGMYQYHHLSVNVPVPPSIRECPSTSIYQGMCQYLHLSENVPVPPSIRDCASIPNSSLKGVYLPAIFQVHTSLNLY*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -