Tcri000419.1
Basic Information
- Insect
- Timema cristinae
- Gene Symbol
- Pias1
- Assembly
- GCA_002928295.1
- Location
- CM009472.1:8046881-8082205[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7 2.9e+04 -3.6 0.1 41 44 281 284 275 285 0.85 2 2 2e-24 3.4e-20 73.0 4.6 1 50 343 392 343 392 0.98
Sequence Information
- Coding Sequence
- ATGGTGTTAAGCTTTAGAGTGTCTGAGCTTCAGATGCTCTTAGGCTTTGCCGGCCGTAACAAATCAGGAAGGAAGACTGAACTGCAAGCTAGAGCTGTTGAGCTGCTTAGACTTCGTTCCACCCCTGTTCAGATGAAGATAAAGGAACTCTACAAGATTATTCAACAAGGGAATCCTATTGGAGCATTGACAATCTCAGCAGCCTCCAGCTCTCCTTTGCCTGATCCACCCCCTGATTCTTACCCCTCATCCACCGACATGTCCAACCCCCATCACAACTCAAACTATCCGTATCCAGCCTACAACGAGCATCCTCCTATTCTGCATAGAGAATCGATAATATACTCGGAACATTATAAGCCCCCATATCCACCGAAGCTGTCACCCGAGCCATGTACCCTTAAATTGTCCCAATCTGGCTATCCTGTTCATCCAGATGTACGACTGAAGAATCTGCCCTTTTTCAACATCCTAGCTGAGCTTCACAAGCCTACAAGTCTAGTTCCCAAGGATTCTAGCCGGGCCCAGGCTGAAACCTTGAAATTTTACCTTACTCCTCAGCAAGCCTCAAATATTACAGTTTCTCGAGACTATAGGTCTGGCAGTCGGCTTGAGTACACCAATGAGGTCCAGATAAGGTTTTGTCTACTGGAAACATCTTGTGAACAAGATGATTTCTTCCCTCCAGGTTTGACTGTCAAGGTGAATGGTCGGCAAGCGAGCCTTCCGccCCCAATCCCAACCAATAAACCTGGCGTTGAGCCCAAGCGACCTCCTAAGCCCATCAACATAACTTCACTGGTAAAACTAAGTCCATTACATGCCAATTTTATTGATGTGACATGGAACTGCGACTATGGTCAGGGCTATGTCATAGCCGTGTACTTGGTGAACAAGCTTGGATCTGCAGAACTTCTTAAGAGGATGCGGGCAAAAGGAGCGCGTCAGTCTGACTACACGAGAGGTCTCATCAAGGAGAAGTTAAGTGAAGATGCTGACTCTGAGATCGCAACAACATCGTTGAGAGTGTCCTTGGTCTGTCCTCTCGGCAAGATGAGGATGGTCACTCCATGCAGAGCATCCACTTGCTACCACCTGCAGTGTTTTGACGCTAATACATTCTTACTGATGAACGAGCGTAAACCTACGTGGGTGTGTCCTGTTTGTGACAAACCTGCCCTTTATGACAACCTAATGATTGATGGctaTTTCCAAGATGTTTTGAGGTCCAGTAGTTTAGCCCCAGACAGCACAGAGATTCAGCTGCACCAAGATGGCTTATGGTCCACTCTCACCCTCAAAGAAGACAAGACTGAAATTCTGGCACTTACAACTAACAAACCAAATCAACCTATAGAAGAAACTATTTCGGATGATATAGAAGTTATTGGCGAGTCTTCCTCTACGTCTTCCAAAGTGGTGCCCAAGATAGTGGTAGAGGCTGTGACGGTGGATTTGACACTAAGCGACAGTGAGGATGACTATCGGGAGGAGGaggaaaaagaaaacattgaaaCAACACCAGACTCCTCCAACCAAACAACATCTGATGAGAAATGTGAATCAGGTACTGCAGACAGGGCTTCTCCACTAGCCTCTGCAAGCAATGCTACCACCATGAAAAGGACAACTTCTAGTGATGACGATGATGTCATAATGATTGACTTAACGTGA
- Protein Sequence
- MVLSFRVSELQMLLGFAGRNKSGRKTELQARAVELLRLRSTPVQMKIKELYKIIQQGNPIGALTISAASSSPLPDPPPDSYPSSTDMSNPHHNSNYPYPAYNEHPPILHRESIIYSEHYKPPYPPKLSPEPCTLKLSQSGYPVHPDVRLKNLPFFNILAELHKPTSLVPKDSSRAQAETLKFYLTPQQASNITVSRDYRSGSRLEYTNEVQIRFCLLETSCEQDDFFPPGLTVKVNGRQASLPPPIPTNKPGVEPKRPPKPINITSLVKLSPLHANFIDVTWNCDYGQGYVIAVYLVNKLGSAELLKRMRAKGARQSDYTRGLIKEKLSEDADSEIATTSLRVSLVCPLGKMRMVTPCRASTCYHLQCFDANTFLLMNERKPTWVCPVCDKPALYDNLMIDGYFQDVLRSSSLAPDSTEIQLHQDGLWSTLTLKEDKTEILALTTNKPNQPIEETISDDIEVIGESSSTSSKVVPKIVVEAVTVDLTLSDSEDDYREEEEKENIETTPDSSNQTTSDEKCESGTADRASPLASASNATTMKRTTSSDDDDVIMIDLT*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01449156;
- 90% Identity
- -
- 80% Identity
- -