Basic Information

Insect: Timema cristinae
Gene Symbol: pnr
Assembly: GCA_002928295.1
Location: CM009482.1:38570166-38600314[-]

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 7.2e-18 5.2e-14 53.0 3.0 1 35 647 680 647 681 0.97

2 3 1.8e-18 1.3e-14 54.9 6.8 1 35 704 737 704 738 0.97

3 3 2.7 1.9e+04 -3.2 0.0 17 24 781 788 778 789 0.68

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	7.2e-18	5.2e-14	53.0	3.0	1	35	647	680	647	681	0.97
2	3	1.8e-18	1.3e-14	54.9	6.8	1	35	704	737	704	738	0.97
3	3	2.7	1.9e+04	-3.2	0.0	17	24	781	788	778	789	0.68

Sequence Information

Coding Sequence: ATGGAACAGAAAGAAGCGAGGGAAGGTGTCAAAGAGGAGGCCATTTCCTCCCAACAACTGCCGCCTCCCCAACGCCAGGAGCCCCCCTCAGTGATTACCTCTCAGCAGCGCCACGTGCGGACCATCACCACGGCGGGCCACATCACCACCGGTCATGTGCCCGACGAGGACGAGGACTACGAAGAGGAGGAGCTACCCCCGCCTCCTTTACAACAGGTAGAGACAGGGGGAACCGAGGAGCAGCTGGTGCCAACGACACCCGAGCAACAGTTGGAGATGGTTGAGCAGCAACAGCAACAGCAAGATCAACAGAGTCCCAACAACCGATTGTACTCGTCCCCCTCGGCGTCAGTGGAGCTCTCTCAGGCGCCTCCTCCGTCCAACTCTGCTCGTCATTCCCCTGCTGGACACACCCCTAGAAACAGTCAACCTTCTCCCAGCGGCCACGTCCCTCTCACACCTCCCGACCATCACCAACAGGTCTACCAAATCACCCCTAGTCACGAGCAGCAAGTGGTTCAGAAGGTCCAAGTTGCAACGCACCTCCCGCCCCCTTCTCCTCAACAGATAAATTACACCGCAACTCCTACTAGTCAAGAGATTCACATCCAGAGGAGTCAACCCCAAATGAGGTACACGCCACCGATATCGAGAGATCAGGTAAGAGTCGCCCCTCAACATCAGATTATCTACACAAGCGCCTCCATCCCTGATAGAGTCCATCACACGTTCCAACAGCAGCACCAACAGAGTCCTCCTCCACCTCTGATGGCGATCAACAGCCTCCATCATTCAGGGGGACACACCATAACTCAGAACGTCCAACACAGGTACACCCCTACTCCTAACAGAGACCGTATGATGCAAAGTTCCAACCCGCATGGCCGGTACGCGTCACCATCCATAGAGCATCAGCATCCCAATGACGTTCAGCAGAGGTACGCGACCCCTCCGTCGACAATCCAAGGACACCACGAACTTCTGCAGCAGCAGGAAGAACAGCAAATGCAAGCGTACCAGCATCAAGACATGACACCCCCTCCTCCTTTAGAACACATCGTCCCGAGTCACAGCAGTCAGCAGATGACCGCGTTTAGCGAGAACATCCAGGTGAAGTTCGATAGCGACGCGGAGCTAGCACACCTCCACCATATAAAGGACCCTTCCATGTCCCCTCAAGGGGGCGGTGAAATGGGTAGCGGTCATCACCTGACGCAACAGGATCTGCCTTCGACGACGTACACAACCTTAGAGACCGTGACCTTGACGAGCTCTTCCGGCGCGCAGTACCAAGGAGGTTACAGTGAGGTTGTGGGAGCCCCCCAGTATCAGATCCTCCCAGCGTCCAGCACCCCGTCATCCGTTGGTGGATTCCCGCCTTTCCTGACGAAGTCCAGCGGTTCCAACAGTGATATATACACCTTGAACCCTTCCCCAACCGGAAGTTTCGGCAAAGTCGTCTTAGCGGGATCCCCGGACGGAAGTTTGGTTTACATGAAGTCCGACCCTACTTTGACGTCGGCCATCCATCCTAGCAAGACCAGCACGGCCCAGCAAATCTTGTACAGCAGTCTTCAAGGTCACAACCAGTCGCTGGCGTACGAGCAGAGCCAACAACCTGGTTCTCCAGGTTCGCAGCAGGTAACCTTGTACGGTCACGCGGGTTCGGCGAGCTACCAGTACATCAGCAAGTTGCCTTCGGACGCCGGGACGCAATACTGGGCGACAACGTCAGTGAACGGGTCCCCTCCTCATCTCGACTACGTCGGGGCAGGGTACGGAGGGTCCACCCTGCAGAACTCTCTCAACACTGAGGGAAGTGGTGGTATTCAGTTGAGCAACGGCTCGTACATCAGCGGCGGTCCATCTACTTCGTGGAGCAGCATGGGCCTAGATGACTCGTACGATCCaaATCATATGCTGGACACGGTGAAAGAGTGCGTAAACTGCGGCGCCAACTTCACCCCCCTCTGGCGTCGCGACGGTACCGGCCACTACCTATGTAACGCTTGCGGTCTATACAACAGGATAAATGGCGTCAACAGACCTCCCGTGCGCAACCAACAGAAGAAGATTGCTTCGACTAGCAACAGAAGAAACGGCGTCTGCTGCGCCAACTGCAACACCACCAGCACTACACTATGGAGGAGAAATAATAACGGAGAACCCGTTTGCAACGCCTGCGGCTTATACTTCAAGTTGCACAACGTGAATCGACCACTGAGCATGAAGAAGGATGGTATACAGACCAGGAAGAGGAAACCAAAGAACACAAGTATGGGGCAATCGGTAGGCGGTTCTATGGGCCCCAACATAAAGACGGAACCAAAACATCAAGCGCAGGGGGGGCCGAGGTTGTGTTCCCCAGACAGGTGTGGATCGTGGGATGTTGACCCAGTGTGTCGTGGCCTGATTGCAGTGGACAAGATGGATATGTTGGGGCACATGTATGTCGGAGGAGGTGGTGGTGGGGCAGGTGGAGACGCGAAATCTTTGATACAGCACCAACACCAACACCAGCAGCAACTGGTGCACCACGGGGGGGTTTTATTGAGCGACGACCTAGGGGAGCAGTATATGGGGGGTGCTGTCCCCTCACAGTCACCTCTGCAACTACCATCCGCCATTCTCCTCAACCGACACATTTCAAACGTACCTCCATTAGAGCCCATACACTCGAGAGCGTCTTCAGACGTCCTGACGACCGTCATCACTTCAACATCGGTCATCAACCACGACCAAGACGACTAG
Protein Sequence: MEQKEAREGVKEEAISSQQLPPPQRQEPPSVITSQQRHVRTITTAGHITTGHVPDEDEDYEEEELPPPPLQQVETGGTEEQLVPTTPEQQLEMVEQQQQQQDQQSPNNRLYSSPSASVELSQAPPPSNSARHSPAGHTPRNSQPSPSGHVPLTPPDHHQQVYQITPSHEQQVVQKVQVATHLPPPSPQQINYTATPTSQEIHIQRSQPQMRYTPPISRDQVRVAPQHQIIYTSASIPDRVHHTFQQQHQQSPPPPLMAINSLHHSGGHTITQNVQHRYTPTPNRDRMMQSSNPHGRYASPSIEHQHPNDVQQRYATPPSTIQGHHELLQQQEEQQMQAYQHQDMTPPPPLEHIVPSHSSQQMTAFSENIQVKFDSDAELAHLHHIKDPSMSPQGGGEMGSGHHLTQQDLPSTTYTTLETVTLTSSSGAQYQGGYSEVVGAPQYQILPASSTPSSVGGFPPFLTKSSGSNSDIYTLNPSPTGSFGKVVLAGSPDGSLVYMKSDPTLTSAIHPSKTSTAQQILYSSLQGHNQSLAYEQSQQPGSPGSQQVTLYGHAGSASYQYISKLPSDAGTQYWATTSVNGSPPHLDYVGAGYGGSTLQNSLNTEGSGGIQLSNGSYISGGPSTSWSSMGLDDSYDPNHMLDTVKECVNCGANFTPLWRRDGTGHYLCNACGLYNRINGVNRPPVRNQQKKIASTSNRRNGVCCANCNTTSTTLWRRNNNGEPVCNACGLYFKLHNVNRPLSMKKDGIQTRKRKPKNTSMGQSVGGSMGPNIKTEPKHQAQGGPRLCSPDRCGSWDVDPVCRGLIAVDKMDMLGHMYVGGGGGGAGGDAKSLIQHQHQHQQQLVHHGGVLLSDDLGEQYMGGAVPSQSPLQLPSAILLNRHISNVPPLEPIHSRASSDVLTTVITSTSVINHDQDD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01449142;
90% Identity: iTF_01445330;
80% Identity: -