Tcri043223.1
Basic Information
- Insect
- Timema cristinae
- Gene Symbol
- Smarcc2
- Assembly
- GCA_002928295.1
- Location
- PGFK01001425.1:21966-29951[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.8e-15 1.3e-11 45.8 0.2 3 44 31 72 29 74 0.95
Sequence Information
- Coding Sequence
- ATGATTCAAATCTGTGGACAGCATGAGTTTGAAAaGTATGTTCGCAAGCCTGCAGCCCTCCGCAACAAAACAGCAGCAAGCCTGACCAGGGAATGGACGGAACAGGAAACTCTTCTGTTGTTGGAAGGACTGGAATTGTTCAAGGATGACTGGAACAAGGTGTGCGAGCATGTGGGCAGTCGAACCCAGGATGAATGCATCCTTCACTTCCTTAGACTGCCCATAGAAGATCCTTACTTGGAGGATCATGAAGCAGGAGGTGGGGCATTGGGCCCTCTAGCCTACCAGCCTATTCCATTCAGCAAGGCAGGGAACCCCATCATGTCAACTGTTGCATTCCTAGCTTCAGTGGTCGACCCCAGAGTTGCAGCTTCAGCTGCCAAGGCCGCCATGGAGGAATTTGCCAACATTAAGGATGAAGTCCCTGCTGCTTTGTTGGACAGCCACATCAAGAATGTAGAAGCCTCATCCACTGATGGAAAGTTTGATCCTGCCGCAGGTTTGGCTCAGGGATTCAAGTCCTTGGCCTTTGACTTTGGGAATCATTATATAAAACCCCGAGATGCGGCTCAAAGCTCAAAGCTCGGCATCACTCCTTGGAGAGTATATCGGTGA
- Protein Sequence
- MIQICGQHEFEKYVRKPAALRNKTAASLTREWTEQETLLLLEGLELFKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDHEAGGGALGPLAYQPIPFSKAGNPIMSTVAFLASVVDPRVAASAAKAAMEEFANIKDEVPAALLDSHIKNVEASSTDGKFDPAAGLAQGFKSLAFDFGNHYIKPRDAAQSSKLGITPWRVYR*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -