Tcri028944.1
Basic Information
- Insect
- Timema cristinae
- Gene Symbol
- RCOR3
- Assembly
- GCA_002928295.1
- Location
- CM009481.1:6290125-6306674[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-09 6.2e-06 27.7 0.0 3 46 127 170 125 170 0.97 2 2 2.1e-13 4.8e-10 40.8 0.0 3 46 383 426 382 426 0.98
Sequence Information
- Coding Sequence
- ATGGTTCTCGCAGAAAGAAATTCTGATAGTTTAAGAAATGGAAGGAGATCAAGAGGACCAAGCCCAAATGGTCATGTTTCAGATTCTAGCACTGAAGAGGAAGGTGCGGAAAAAATAAGAGTTGGACGGGATTACCAGGCACTGGTTCCAGAGTGCATTCCAGTCAATGACCGACGCCTGGATCAGGTCAACGACCGAGCACTGCTTGTGTGGTCACCCACTGTGGACATACCAGATTTCAAGTTGGATGAATACATATCTTTGGCCAAAGAAAAATATGGCTATAATGGTGAACAAGCTCTGGGAATGTTATTTTGGCATAAACATGATCTGGAGCGAGCTATCAGCGATCTTGCCAATTTCACACCATTTCCAGATGAGTGGTCGGTTGAAGATAAAGTGCTTTTTGAGCAAGCCTTTCAATTTCACGGAAAAAGTTTTCACCGTATCAGGCAAATGCTACCTGACAAATCGATAGCTAgtcttgtaaaatattactattcgTGGAAGAAGACTCGCAGTCGGACCAGTTTGATGGACCGTCAGGCGAGGAAGTTGGCTGTGCACAGGGAGGAGGGTAGTGAAGGAGGTTCGGAGCTTGGCTCCAACACTGACTCCGATTCTGATGAAAAGAAATGGACAATTCATCGAGGTATTCGCCGTAAGAGTGGGTCACCGCCTCGACCTGCGCAGAACAATGATGAGAGTGGGGCCCAGAAGGATGGTTCAGAAGGGGGGAAGAGCTCTTGCTCCAACTGTGGAATAGCTTGCACACAGAGTCATACCACGCCTAAAGGTAGCATGTGTAACACATGTTTTCAGCACTGGAGgcgaACAGGAAGTGTCCGTCCCACCACAGGTCCAGTAAAGCGTGAGAGGCACTGCCATGTTCTGTTGCGTAATAAGCGCAAGCCCCCACGAGGCATGTACATCAACCATGACGATCTAGTGGCCATGGCGTCTGGCCCCCCAACACCAGCCCCCGCCACTCAGGGAGAGCAAATGCTGAAAGCTATGGATAGAGAAATTGTTTCTTTGAAACGACAAgttcagaataacaaacaaactttgagttcttttaagagaaaaacaaGTGAGGGGATTGATGATTTTCGACCAGCAGATACAACTAGTCGTATAAATGCCCGCTGGACTAACGATGAGCTTCTCTTGGCTGTTCAAGGTGTTCGCAAATATGGCAAGGACTTTAAAGCCATTGCTGAAGTTATTGGAACCAAGACAGAAGCTCATCTTAGGAGCTATTTTGTCAACTATCGCCGTCGCTATAACTTGGATGCTGTCTTAAAAGAATTTGAAGCGGAAAATGGTCCGATAGTTGAAAATGATGAGAAAGATGAGAAGATGGAAATAGATGGAGTTTCCTCAGGCAGCGAACCCAGCACTCCAACTCCTGGTGCTAGTTCCCCTGTCACAGTTGGCCAAGGAAATCATACCTCTGCCAAGCAACCTTTCTCAAAGAACGCAGTTGCTTCTGTACCAACTAGTAAATGA
- Protein Sequence
- MVLAERNSDSLRNGRRSRGPSPNGHVSDSSTEEEGAEKIRVGRDYQALVPECIPVNDRRLDQVNDRALLVWSPTVDIPDFKLDEYISLAKEKYGYNGEQALGMLFWHKHDLERAISDLANFTPFPDEWSVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRSRTSLMDRQARKLAVHREEGSEGGSELGSNTDSDSDEKKWTIHRGIRRKSGSPPRPAQNNDESGAQKDGSEGGKSSCSNCGIACTQSHTTPKGSMCNTCFQHWRRTGSVRPTTGPVKRERHCHVLLRNKRKPPRGMYINHDDLVAMASGPPTPAPATQGEQMLKAMDREIVSLKRQVQNNKQTLSSFKRKTSEGIDDFRPADTTSRINARWTNDELLLAVQGVRKYGKDFKAIAEVIGTKTEAHLRSYFVNYRRRYNLDAVLKEFEAENGPIVENDEKDEKMEIDGVSSGSEPSTPTPGASSPVTVGQGNHTSAKQPFSKNAVASVPTSK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00995150;
- 90% Identity
- iTF_01446532; iTF_01444711; iTF_01447503; iTF_01448499; iTF_01449561;
- 80% Identity
- iTF_01446532; iTF_01448499;