Basic Information

Insect: Timema cristinae
Gene Symbol: SNAPC4
Assembly: GCA_002928295.1
Location: CM009484.1:24404415-24410839[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 8.7 2e+04 -2.8 0.0 25 37 91 103 90 103 0.89

2 6 0.86 2e+03 0.5 0.2 2 17 142 157 141 170 0.88

3 6 1.4 3.3e+03 -0.3 0.1 3 19 259 275 257 287 0.87

4 6 1.8e-10 4.1e-07 31.5 0.1 1 45 369 415 369 416 0.95

5 6 1.1e-12 2.5e-09 38.5 0.2 1 43 422 468 422 470 0.96

6 6 1.3e-14 3.1e-11 44.6 0.0 1 46 477 522 477 522 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	8.7	2e+04	-2.8	0.0	25	37	91	103	90	103	0.89
2	6	0.86	2e+03	0.5	0.2	2	17	142	157	141	170	0.88
3	6	1.4	3.3e+03	-0.3	0.1	3	19	259	275	257	287	0.87
4	6	1.8e-10	4.1e-07	31.5	0.1	1	45	369	415	369	416	0.95
5	6	1.1e-12	2.5e-09	38.5	0.2	1	43	422	468	422	470	0.96
6	6	1.3e-14	3.1e-11	44.6	0.0	1	46	477	522	477	522	0.97

Sequence Information

Coding Sequence: ATGGATAACAACGCGGAAAGTAAGAATGGTGTTGAAATGACAACCGCACTAGAAGTTGACATATGCTTCCTTGAAGGTGACCAAGACCCAATTACTTTTGATCCCACATATGGTGGTCCACCAATCAACAAGCCACCTGTGATTAAAAGAAAGCCGGGCAGACCGCCTAAcgttaataaaagaaatacaaatggCAAGGCTCCGAAAGAAGCGAGCATATGCTTGGATGATGAAAAAACAGAGACACTCTTCCCTGTCCAGAAAAAGCAAGCCGTGCCTAAGAAAATGCAAGGTACTACGCCTAAACAATATTCCTCTATAAAGGGTAGCCCAAAAAAAGTATGTCTTATTACTTCCATTGAGAATGATGCTTGCTCTAATGGCATTAACGAAGAATCGATGTTTCCTGACCAGAAAGATGAAAATCCTTTTACATTggatgaacttaacaaattaattgagCTTCGGGAAGAGGAAATCGCCTCCTTGAAGAAATGGGATGCACTCCTTTCAGAAACTAGCATCCGTATAATCAACGAAAAGGAGAAGTGCTATCAAGAAGAGAATGAGCTCCTACAACACTTTGCAACGAACAAACCTCCGAGACATAAGTCTGCAaatgatgaaacatttgttGCCAAAGACAGTTGGGTTTACCTATATGGGGCCCCATACTTCAAGGATAGCAGTTTTTTCCCAGCCCCTCCTAACCAAGACGTCCAATTGAAGAAAGCCAGGAATGagattaatattatagatatttccCAGGCCAGGAGATGGAGATCTCAAGATAagactattttggaaaaagcgGTAAAGAAACAGGAAATTGAGAAACTACTTGTCAAAAACAAAACAGACGAGCTTACCttattggaaaatttaaaacaatgtccGGGAAAAGACAAAATAACTTTACAGGAAAAATTGGATGACCTAAAGGCTACAGCTGTTGAGATTAGCTCTCGGTCGCTGGCAGATTTAGTAGGTGACAAGTGGGTGGAATATGACTGGATGAGGATTTCAGTGACAGACTTTAAGAACCAGCACACTCCAGAAGAGTGCCGCGGAATGTGGTTTGGCTATGTTCATCCCGCAATTGTTCGATCTCCATGGACCCATCAAGAGGATATGCGTCTCAAAGAAGTTGCATTGAGCTTCAAATGTCAGGATTGGGAACAAATTGCAGAAGATGTGGGAACAGGCCGCACTGCATATCAATGCATGTGTCAATATCAGATGCGACTGAATGAAAATTTGAAGCGTGGAAAATGGACAGACGAGGAAGACAGATTGGTGAAGCAGGTGGTGGCAAGATATCGCGTTGGTTCTCATATCCCTTGGTCCAAAGTAGCTATACATATCCCAGACAGAACCAAGGTGCAGGTTTTCAACCGCTGGAAGTATTCCATTGCACCTCACATCAAGAAGGGAAGGTTTACTTCTAAAGAGGACCAGATGATCATAACTGCCTTGCAACGTTATGGCAAAAACTTCAATCAGATTGCAAGGTTTCTGCCTGATAGGACACCTATTCAAATTCGTGATcgatataattcaaatttgcAGTACCTTGATCGAAAGGTAAATTTGGGTAGGTCTAATACAGTCTTGAGCGATGAAACTCTTATTGAAGTTCGAGATGAGCTTGGTCTTGCTGTAAGGAAACGTCCTGGGCGTAAACCAGGTCAAAAGAAAGTACTCTTACCAGCTGAGGAAGGCTTCATTGATTTTTATCGTGTGGTGTATCAACAGCCACCTGGGCGTAGGAAAGGTATTTATAATCGAGAGGAGCTACTCAATGAggcaaaatgtattaaacattttctcGAGTTTTTCGGCGCCGTGTTGCACATACCAACTGATGAATCTGTTATTAGTGCAGATGTCTGGAATGAAGGCTTCCACAACAAACATGTACTCGAAATTTTGCGTGATGGAGATATCTATGACGATTCAACGTTGATCAAATTGGAAACACACAGAAAACTGAAGTTGAGCAATGAAAAGAGAAGGCTCCAATCActaagatgtaaaattaataaaaaaactatggaAAATGACAATGACAATGACAATATGGATATTGATTTGGAGAATTTACCCATTCAAGATTCCAAACCATCCCAAATTGTCagtcaaactaatatttataatgatttggATACAATTCTAGGCATATCCTTGCCTAAAAAAAAGTGCACCTTTTGGTTGGCAGAACATGTTAAAAATTCTGGAATAAACATTGCCACAGGAAGCACAACTATAGTTCCATCCACAAGTAGTCACTCTGCCACTACTAGAAACAAGAAAGCATCTGAGACTAAATTAGTAGAAAGTGTGACTCAAGAGAAACCAACATGTAGTTCAGTGActgctaaacaaaataatgtctCTCCAAAACAAGTGGTACCTTCGGTCTCTTCATCGGCATCTAAAGGCAAAACTCTTTCCTCGTCTAGTGGCTTAGATGCTTCTAGTAGTGACTTTGAAAATGTAAGGAAAAAggtaagaagaagaaacaaatcCCAAAGTCATATTGTCTGGAGCTCACAAAGCAGAGATGTAGCCTTATGCCTTCCCCCCAACCAAACCTCTCTCATTGGTTGCCGCACACTCTTGTTGTGCCGTCGTGGACTATCCAAGGACATTGAAAACTTTCACTCAATACAGAAGGAAGGCACAACCCAAAATGAGTCTCCGTTGCTTGACAATTCTAGTGATAGCTCTGACTTGGATCATGAAGGGGACACCAAGCAATATCAAGGAAAAGACCAAGGCCAAAACACTTCTATTGATTTGAGCGACAGCATTCATGAACAGGACTGTATGAAGGATGTGTCACTCAAGAAGTTGAAGAAAAAACAAGAAGCAACACACAAAGACACATTGTATGCTTTATGA
Protein Sequence: MDNNAESKNGVEMTTALEVDICFLEGDQDPITFDPTYGGPPINKPPVIKRKPGRPPNVNKRNTNGKAPKEASICLDDEKTETLFPVQKKQAVPKKMQGTTPKQYSSIKGSPKKVCLITSIENDACSNGINEESMFPDQKDENPFTLDELNKLIELREEEIASLKKWDALLSETSIRIINEKEKCYQEENELLQHFATNKPPRHKSANDETFVAKDSWVYLYGAPYFKDSSFFPAPPNQDVQLKKARNEINIIDISQARRWRSQDKTILEKAVKKQEIEKLLVKNKTDELTLLENLKQCPGKDKITLQEKLDDLKATAVEISSRSLADLVGDKWVEYDWMRISVTDFKNQHTPEECRGMWFGYVHPAIVRSPWTHQEDMRLKEVALSFKCQDWEQIAEDVGTGRTAYQCMCQYQMRLNENLKRGKWTDEEDRLVKQVVARYRVGSHIPWSKVAIHIPDRTKVQVFNRWKYSIAPHIKKGRFTSKEDQMIITALQRYGKNFNQIARFLPDRTPIQIRDRYNSNLQYLDRKVNLGRSNTVLSDETLIEVRDELGLAVRKRPGRKPGQKKVLLPAEEGFIDFYRVVYQQPPGRRKGIYNREELLNEAKCIKHFLEFFGAVLHIPTDESVISADVWNEGFHNKHVLEILRDGDIYDDSTLIKLETHRKLKLSNEKRRLQSLRCKINKKTMENDNDNDNMDIDLENLPIQDSKPSQIVSQTNIYNDLDTILGISLPKKKCTFWLAEHVKNSGINIATGSTTIVPSTSSHSATTRNKKASETKLVESVTQEKPTCSSVTAKQNNVSPKQVVPSVSSSASKGKTLSSSSGLDASSSDFENVRKKVRRRNKSQSHIVWSSQSRDVALCLPPNQTSLIGCRTLLLCRRGLSKDIENFHSIQKEGTTQNESPLLDNSSDSSDLDHEGDTKQYQGKDQGQNTSIDLSDSIHEQDCMKDVSLKKLKKKQEATHKDTLYAL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -