Basic Information

Insect: Timema bartmani
Gene Symbol: ZNF236
Assembly: GCA_902151455.1
Location: CABFWB010000001.1:78122-143390[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 1.6e-05 0.0035 19.9 0.3 1 23 210 232 210 232 0.98

2 28 0.015 3.3 10.5 0.5 1 23 238 260 238 260 0.98

3 28 3.4e-05 0.0075 18.8 2.4 3 23 267 287 266 287 0.97

4 28 0.099 22 7.9 0.4 3 23 295 315 293 315 0.95

5 28 0.031 7 9.5 5.5 1 23 325 347 325 347 0.98

6 28 0.0001 0.023 17.3 4.2 1 23 370 392 370 392 0.98

7 28 0.00043 0.097 15.3 3.3 1 23 398 420 398 420 0.98

8 28 9.4e-05 0.021 17.4 0.1 1 23 426 449 426 449 0.96

9 28 4.6e-05 0.01 18.4 1.4 1 23 459 482 459 482 0.98

10 28 3.5e-05 0.0078 18.8 1.9 1 23 605 627 605 627 0.98

11 28 2.3e-06 0.00052 22.5 1.3 1 23 633 655 633 655 0.99

12 28 7.8e-06 0.0017 20.8 3.2 1 23 661 683 661 683 0.98

13 28 0.0084 1.9 11.3 4.0 1 23 689 711 689 711 0.94

14 28 6.7e-05 0.015 17.9 3.2 1 23 776 798 776 798 0.98

15 28 5.5e-06 0.0012 21.3 0.4 1 23 804 826 804 826 0.99

16 28 0.0001 0.023 17.3 2.1 1 23 832 854 832 854 0.98

17 28 0.0029 0.64 12.7 6.6 2 23 861 882 860 882 0.97

18 28 0.077 17 8.3 7.4 1 23 1168 1190 1168 1190 0.96

19 28 9.1e-08 2e-05 26.9 1.6 1 23 1196 1218 1196 1218 0.98

20 28 0.0003 0.066 15.8 1.0 2 23 1225 1246 1225 1246 0.97

21 28 0.00026 0.057 16.0 1.1 1 23 1252 1274 1252 1274 0.98

22 28 3e-07 6.7e-05 25.3 1.2 1 23 1355 1377 1355 1377 0.98

23 28 0.00022 0.05 16.2 7.6 1 23 1383 1405 1383 1405 0.99

24 28 3.4e-06 0.00077 21.9 2.7 1 23 1411 1433 1411 1433 0.98

25 28 0.025 5.6 9.8 1.4 1 23 1439 1461 1439 1461 0.98

26 28 1.4e-06 0.0003 23.2 1.8 2 23 1690 1711 1689 1711 0.96

27 28 5.1e-05 0.011 18.3 1.1 1 23 1717 1739 1717 1739 0.97

28 28 2e-06 0.00045 22.7 1.7 1 23 1745 1768 1745 1768 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	1.6e-05	0.0035	19.9	0.3	1	23	210	232	210	232	0.98
2	28	0.015	3.3	10.5	0.5	1	23	238	260	238	260	0.98
3	28	3.4e-05	0.0075	18.8	2.4	3	23	267	287	266	287	0.97
4	28	0.099	22	7.9	0.4	3	23	295	315	293	315	0.95
5	28	0.031	7	9.5	5.5	1	23	325	347	325	347	0.98
6	28	0.0001	0.023	17.3	4.2	1	23	370	392	370	392	0.98
7	28	0.00043	0.097	15.3	3.3	1	23	398	420	398	420	0.98
8	28	9.4e-05	0.021	17.4	0.1	1	23	426	449	426	449	0.96
9	28	4.6e-05	0.01	18.4	1.4	1	23	459	482	459	482	0.98
10	28	3.5e-05	0.0078	18.8	1.9	1	23	605	627	605	627	0.98
11	28	2.3e-06	0.00052	22.5	1.3	1	23	633	655	633	655	0.99
12	28	7.8e-06	0.0017	20.8	3.2	1	23	661	683	661	683	0.98
13	28	0.0084	1.9	11.3	4.0	1	23	689	711	689	711	0.94
14	28	6.7e-05	0.015	17.9	3.2	1	23	776	798	776	798	0.98
15	28	5.5e-06	0.0012	21.3	0.4	1	23	804	826	804	826	0.99
16	28	0.0001	0.023	17.3	2.1	1	23	832	854	832	854	0.98
17	28	0.0029	0.64	12.7	6.6	2	23	861	882	860	882	0.97
18	28	0.077	17	8.3	7.4	1	23	1168	1190	1168	1190	0.96
19	28	9.1e-08	2e-05	26.9	1.6	1	23	1196	1218	1196	1218	0.98
20	28	0.0003	0.066	15.8	1.0	2	23	1225	1246	1225	1246	0.97
21	28	0.00026	0.057	16.0	1.1	1	23	1252	1274	1252	1274	0.98
22	28	3e-07	6.7e-05	25.3	1.2	1	23	1355	1377	1355	1377	0.98
23	28	0.00022	0.05	16.2	7.6	1	23	1383	1405	1383	1405	0.99
24	28	3.4e-06	0.00077	21.9	2.7	1	23	1411	1433	1411	1433	0.98
25	28	0.025	5.6	9.8	1.4	1	23	1439	1461	1439	1461	0.98
26	28	1.4e-06	0.0003	23.2	1.8	2	23	1690	1711	1689	1711	0.96
27	28	5.1e-05	0.011	18.3	1.1	1	23	1717	1739	1717	1739	0.97
28	28	2e-06	0.00045	22.7	1.7	1	23	1745	1768	1745	1768	0.98

Sequence Information

Coding Sequence: ATGGAGACACAAAACTTGAGTGAAGTTCTACCCGGCGATTCACAGTTTGTCTCTGTACCACTAGACACTATACTTTCTAGCAGTGGATTTGTTTTTGCTGGAGATGGCAACAATCTGGTCACAACTTCAGataaccTTGAAGATGGAACCACAGCATTCTTAACCGTCCCATTGCATTTTCTTCAAGAAAATGCGATCATCGATCAAGGGACTCCCCAAAACATCATTCTGAAAAATATTAGCAACAATAATATAGGATTGTTCTTGGATGGTACCCAGTTGGCACTCCTCAACAACAATCCTGGGACTCTCAATTCTGGGTGTGATGTAGACGAGGCTCATTGTGATAcggagagagaaaaaacagaGGAATTGCACATGGAGATGAATATGGATCTCCCCGCCCTCGACAAGGAGCCCAGAGAGGAACTTGCTAGCCAACTAGGGGAGTTAGAGGAGGAGACAGGAGCGGAGAAGGAGCTACATTTCCACATAATTGGACCGCGACCACCTCGCCACTGTCCCTCGCTGATCCCGTCCTTCAAGAATGATCCTGTCGCGAGGAGAGGACCTGGCCGCCCACGCAAAGACGAGACCGAGGTGGAGCCGCCTGTGGGGAAGGGCCCCTTCAGGTGCAACGTTTGTGCCAAGGAATTTCCCAAGTGGGCCCAGCTCCGTCGTCACATAAAACTCCACTCAGAAGACAAGCCATACCGCTGTCACTCATGCTCTGCCACGTTCAATGTCGCAGTCAACCTGTCTTTGCACGAGGCCACCCACAACGTAAAGGACCCGTGCTGTCCCGAGTGTCACAAAAGGTTCAGCCGCATCGCCAGCCTCAAGGCGCACATCATGGTGCACGAGCAGGAGGAAAACCTATTCTGCTCTGACTGCGGGGATGAGTTCAACACCCAGATGCAACTTGATGAGCACAAGAAAGAACACGAAGAAGTGAAAGCTTTCTCCAGAAAGTACCGGTGTCACCAGTGCTACCAACACTTTTCTCTGTATTCTGCACTGCGAGAACACTTGAAAGATCATAACAAGGTGAAAGCTTCGCTGAGTCACAAATGTCACAAACGCAATATTGATCGAACTGCCTTCTGTCACAAATGTGACACGTGCACCAAAAGCTTCCAGAAACCAAGTCAGCTGCTTCGACATAAGCGCATACATACTGGGGAAAGACCTTATAAGTGTCATCAGTGTATGCGTGCCTTCAACCAAAAGGGCTCACTACAAATACACATGACGAAACACAACGGTCTGAAGCCTTTTCCATGTGACTTTTGCTCCGCCATGTTCAGCCAGAGAGGAAACCTTCGAGCACACATCATTAGAGTCCACACTATCCCCACCTGTGGTGAGCAGGTGTACAAGTGCAACGAGTGTCCTTGTGCATTCAAGAAGCTTGGCAGCCTCAATGCTCATATGAGTCGGATGCATGTTGCAGACAAGTTGGGTGTTGTTGAGATATTGGGAGAGCAGCAAGGAGAAGCTAACATGAGTGCGGTGATGTCGTCATTAGCCGAGCTACAGAAGGAGCTAGGGGAAACCCCACAAAGCTCAGATGCAGACATTCTTCATCAGGCCATCGTCAACAGTGGATTGTCTAACAACAAACCAGCCAGCACTCCAGAATCAAAACCGTCTGAACCACGCGACACTTCAAGAAAGAAAACCGGGGAAGACCCCCACACCTTCACAAAGGATGGAGAGTCGACATCGCTCATTACGCTCGCTGATAAGGGGCAGGATGGTGTTGTCAGGAGGTATGTCATTCGTCAGCGCAAGGTTGGCAATATGCGTTGGCACCAATGTTCCTATTGTATGAAGGAGTTCAAGAAACCATCTGATCTCGTCCGACATATCCGCATCCACACAAATGAGAAGCCGTTCAAGTGCAATCAATGCTCGCGATCATTTGCCGTGAAGTCAACTTTGACAGCGCACATCAAGACTCACACAGGCATCAAGGACTACACTTGTGCTCACTGTTTCAAGAAGTTCTCTTCGTCCAGTAGTCTCAACGTTCACATAAGATTGCACACGGGACATAAGCCCTTCAGATGCCCTCATTGCAGCAAGGCGTTTCGCACTGTGGGGCATCGCAAGGCGCATGTCACCTTCCACTGCAAGCAAAACCTGACAGCTCACGAGAGAGCACTTCTTAGGCTGGCTCATAGGAACAAATTACAGATGAACGACTTGCCCGAGGTCACTCTTGCGGAACCCATCATCATCACAGACTCTGGGCTGGTGCAAAATGTGGCACGTAACGCTTCTGTTTTCCTTTCTGGTGATCTCACCAGCACAGAAAGGCCATATAAGTGCCAAATTTGCAACGCGGCTTTCCGCAAAACCAGCCACCTCAAACAACATGTCCGCCAGCATACGGGAGAACGACCGTACACTTGCATGGAATGTAATAAGTCATTTATTTCCAATGGCGTGCTGAAGGTCCACATACGCACCCATCAAGGCATCAAGATGTTTAAGTGCAAAACTTGCAACAACTTGTTCTCGACCAATGGCAGCTTAAAGCGGCACATGGGGACCCACAGCGGCCACCGACCAATCATGTGTCCTTACTGTCACAAGACTTTTAAAAGCACTGTTAGCTGTCGCAAGCACATGAAGACACACAAACAGGAAATAGCCATGCAGGTCCTGGAGCAGACAGGTTTAAGGAGACGGGAAGGGGGAGAACCCATAACGGTGATTGCTAACAACGGTTCAAGTTTCCCAGCCGATGGTCTGGGCCCGGACTTTACTCAGGCGTTCTCAGACCGACCGTTCCATGTGGCCTCCATAGAGCAAGCAGAGCAAGACGAGAGCACTTTCGCACAGAATACGCTCGTACAGACACTTTCCACagatGTGATTGGTGGTGAACAAGAAGCTGATATTAACACAGCTACGATAATTACCCACACTCTCCATGCAGACTCTACAGGCACAATTACGCTACCCACCCTAGCTGGACAAAACGCATTAACTCAGGAAAACCTTCAGGAGATTGAGCGCACTTTGAATGAACAAATCTTCGGCAACTCCAGCTCTATGGCGGAGGAAGTTCAGACAGTGACCATGTCCCTTGCCGGGGAGTTGGCCGAGGAGAGAGAGGATGACAGCACCGTGGACCTTGGAGAACACCCTTGTTCGCCTGAGGGAGAGAGGGACAGAGATGACACCTCCCAACCTGACACAGAGTTCAGCAACCAGTTTGAGCCATGTACCTTCAACATACAGAGTGACCCCTTAGAACTTGACAACCTGGAGCATGAGGACACCCTCGCGCCTACCATTGTGAGCATAATATCTCCTGTATGCAGTGGGGCCAACACGATGAGACATTCGCCAGAGGGAGAACCTCGGCACGCCGTCCAAGAAGAGGGAGGGGAAGCACAAAATGAGCCCGATTCACAGGAGGAATACGAGGCACCGAACGAACCTGATTCTCAGGAGGATGATATGGATGATGAGGGGATCCGCAGACCTTACAAaTGTAAATTATGCCCTTCAAGATTTAAGAAGTCTTGTCATCTTAAGACACATTTGGTTTACCACACCAAGAAAAAGTCATTCACTTGTGAGATTTGTAAAAAGGCTTTCTCCACTAACAGCTCTTTGAGGATGCACATGAGATCTCATTCGGgagagaagaagaatgtgtGCAGCGTGTGCGGAGCCAAGTTTACGACCATCCATGACCTCACTAGACATTCAAGAGTGCACAGTGATGAGAGACCATTCAAATGCAGCGTGTGTGGGGAACTGTTCCGCACAGAGGTGCAGCTGCACATCCATATTAAACAGCACGACCCGCAGCAGTGCAAGGAGAGCGGGGAACTCTTGGTACAGCACCGCCCAACACATCGCACTCGGCGCAAGCAGGTCATAAGACTCACGGTGGAAGAGACAGAGGTCTTGGCACAACAACCAATCACGTTGGCCGCTACCCTCTCGGAAGAGGTGCTAATTCTGTCGGCCGCGGAAAGGGACCGCATCTCGGAGGTTAAGGACCCTGAGGAAAAGTTCCAAATGGAGCCTCTTTATGCACATCAATGCGAGTACTGCCCCAAGAGTTTCCGCAAACCCTCAGACCTGGTTCGCCATGTCCGCATCCATACAGGCGAGCGACCATACAAGTGCCAGCACTGCAGCAAGTGTTTCACGGTCAAGTCGACACTGGACAGTCATCTCAAGACGCACGAGGGTCTCAAGCGGTTTGAGTGCCACGTTTGTGGGTGTATGTTCGCCACCAAGGGTAGTCTCAAGGTCCACATGAGACTGCATACAGgGGCAAAACCATTTAAGTGTCCATTGTGCGAGAGCCTGTTTAGAACATCAGGACATCGCAAGGCCCACCTCATTTCCCACGTCAAAGAAGTGACCGGATCAGGCAAGCAGGCAAACATCAAGAGGCGTGCTCGACGAAGAAATGTCATACAGATGTTGATGGCTTCGCAAGAAGAAGATCCTATTGCCATCCCTACCCAAAATAACGCCGCCACCGAAGAAACGCCTCTAGATTCGGAAACAGGGGTCACGTTTGAAGGAACCAGTGAAGAGGTCACCGAGTTGGCACTCGACTCTAGTCTTGAACTCATACCGGTGGAGGAGACTCTTCTGGAAGAAGGCTCTACAGTGGAGAACTTTCAGCTACAATTATCCAATGGCCTTTCGTTGTCAACTGGGGAGAGCAATGGAATTATCATTCCTCAAACATTGCAACCTCTCGATGTTTTCCTCCAACAATTGCAAGTTTCGAACATTGTATTTCAGGGTGAAGAGCTGCAGCCGGATGATCTCACTGACCATGACCAGGAGATGAGTTTTGAAATCCATACGGATTCAAACGGGCAGATCATCAGTATACAACCGTCAGACGTTGTAAGTAACGGGGCAATCTTCAGGTTAGCAGAAGAACCGAACCCGGAACTTGAGAAAGACTCGGAGACCGGAGAGTCCCAATTGAAATTCACACGGTTCCAAGTGATGGACGGTTCCCTGGTACCTGTGTCCAACAAAAATGAAACCAGCTACGTGAGTTCTTCTGTATGCCGCTGTGGGTCATGCGGCAAGTCCTTCAACAAGCCATCACAGCTCGAACGCCATATTCGCATCCACACGGGGGAGCGTCCTTTTGCCTGCTTGCTGTGCAGCAAGACATTCAACCAGAAGAGTGCCCTAAACACGCACGTAAAGAGCCACTTTGGGGATCGTCCTTTCAAATGTCAGTACTGCGAGATGGGTTTCACCCAAAAGGGAAACCTGAAGACTCACATGAAGCGGGCTCACAGCCTGCTGATGAAGAATGAGATGGCGCAAAACTTGGAGTTGGAAAAAGTTGTAGTGGAACTGTTCCCCCACGCTAAGACCCTTTCCCTTTCGTGA
Protein Sequence: METQNLSEVLPGDSQFVSVPLDTILSSSGFVFAGDGNNLVTTSDNLEDGTTAFLTVPLHFLQENAIIDQGTPQNIILKNISNNNIGLFLDGTQLALLNNNPGTLNSGCDVDEAHCDTEREKTEELHMEMNMDLPALDKEPREELASQLGELEEETGAEKELHFHIIGPRPPRHCPSLIPSFKNDPVARRGPGRPRKDETEVEPPVGKGPFRCNVCAKEFPKWAQLRRHIKLHSEDKPYRCHSCSATFNVAVNLSLHEATHNVKDPCCPECHKRFSRIASLKAHIMVHEQEENLFCSDCGDEFNTQMQLDEHKKEHEEVKAFSRKYRCHQCYQHFSLYSALREHLKDHNKVKASLSHKCHKRNIDRTAFCHKCDTCTKSFQKPSQLLRHKRIHTGERPYKCHQCMRAFNQKGSLQIHMTKHNGLKPFPCDFCSAMFSQRGNLRAHIIRVHTIPTCGEQVYKCNECPCAFKKLGSLNAHMSRMHVADKLGVVEILGEQQGEANMSAVMSSLAELQKELGETPQSSDADILHQAIVNSGLSNNKPASTPESKPSEPRDTSRKKTGEDPHTFTKDGESTSLITLADKGQDGVVRRYVIRQRKVGNMRWHQCSYCMKEFKKPSDLVRHIRIHTNEKPFKCNQCSRSFAVKSTLTAHIKTHTGIKDYTCAHCFKKFSSSSSLNVHIRLHTGHKPFRCPHCSKAFRTVGHRKAHVTFHCKQNLTAHERALLRLAHRNKLQMNDLPEVTLAEPIIITDSGLVQNVARNASVFLSGDLTSTERPYKCQICNAAFRKTSHLKQHVRQHTGERPYTCMECNKSFISNGVLKVHIRTHQGIKMFKCKTCNNLFSTNGSLKRHMGTHSGHRPIMCPYCHKTFKSTVSCRKHMKTHKQEIAMQVLEQTGLRRREGGEPITVIANNGSSFPADGLGPDFTQAFSDRPFHVASIEQAEQDESTFAQNTLVQTLSTDVIGGEQEADINTATIITHTLHADSTGTITLPTLAGQNALTQENLQEIERTLNEQIFGNSSSMAEEVQTVTMSLAGELAEEREDDSTVDLGEHPCSPEGERDRDDTSQPDTEFSNQFEPCTFNIQSDPLELDNLEHEDTLAPTIVSIISPVCSGANTMRHSPEGEPRHAVQEEGGEAQNEPDSQEEYEAPNEPDSQEDDMDDEGIRRPYKCKLCPSRFKKSCHLKTHLVYHTKKKSFTCEICKKAFSTNSSLRMHMRSHSGEKKNVCSVCGAKFTTIHDLTRHSRVHSDERPFKCSVCGELFRTEVQLHIHIKQHDPQQCKESGELLVQHRPTHRTRRKQVIRLTVEETEVLAQQPITLAATLSEEVLILSAAERDRISEVKDPEEKFQMEPLYAHQCEYCPKSFRKPSDLVRHVRIHTGERPYKCQHCSKCFTVKSTLDSHLKTHEGLKRFECHVCGCMFATKGSLKVHMRLHTGAKPFKCPLCESLFRTSGHRKAHLISHVKEVTGSGKQANIKRRARRRNVIQMLMASQEEDPIAIPTQNNAATEETPLDSETGVTFEGTSEEVTELALDSSLELIPVEETLLEEGSTVENFQLQLSNGLSLSTGESNGIIIPQTLQPLDVFLQQLQVSNIVFQGEELQPDDLTDHDQEMSFEIHTDSNGQIISIQPSDVVSNGAIFRLAEEPNPELEKDSETGESQLKFTRFQVMDGSLVPVSNKNETSYVSSSVCRCGSCGKSFNKPSQLERHIRIHTGERPFACLLCSKTFNQKSALNTHVKSHFGDRPFKCQYCEMGFTQKGNLKTHMKRAHSLLMKNEMAQNLELEKVVVELFPHAKTLSLS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -