Tbar017364.2
Basic Information
- Insect
- Timema bartmani
- Gene Symbol
- glmp-b
- Assembly
- GCA_902151455.1
- Location
- CABFWB010001151.1:73472-96975[-]
Transcription Factor Domain
- TF Family
- NCU-G1
- Domain
- NCU-G1 domain
- PFAM
- PF15065
- TF Group
- Unclassified Structure
- Description
- NCU-G1 is a set of highly conserved nuclear proteins rich in proline with a molecular weight of approximately 44 kDa. Especially high levels are detected in human prostate, liver and kidney. NCU-G1 is a dual-function family capable of functioning as a transcription factor as well as a nuclear receptor co-activator by stimulating the transcriptional activity of peroxisome proliferator-activated receptor-alpha (PPAR-alpha) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-35 6.3e-31 109.9 0.2 1 127 71 197 71 210 0.84 2 2 2.9e-88 1.3e-83 283.2 0.6 72 351 210 496 206 498 0.92
Sequence Information
- Coding Sequence
- ATGTCCAAAGTTGCTCATAAGTTGCCCACTATTGGCGATTTGTGGAATAGTTACCAGTCAGGCAAACTATCGCCCATCCGGCGACTGCTTGGTAAATCACATGTTTATATGGTGTCATTCACACGGGGCAACACTTGCCGGCCAGTACCCCAAcTCTCCTCCTCGGTGAATCCTGGGTGCAATCCGGATGCAGGCTACTGTGACAAAGTGACCCTTGTTCACGTGAGGGCAGATGGGCCAAATGACACGCTCCACTACTTGTGGGGGTTCACAGGAAAACCATCTATTATTCTTGCTTTGACTTCACCCAATGCAACACTTACTATCAATTGGAAAGATTTTATCTTTGCGAGTGTCCAAGCTATTGAGTTCAGCGAGAAACCAGTCTATAGCTTTGGATTGGTAGTTAACAAGattTGGGAGTACAATGATGTGAATGATACAGGCTACCTAAATATGTCACTTGTCAACAAGAATTACAAGAGAGCGTATGACACGGAGTATTTCCACTGGAAAATTGCAAAGTTTGAAAATGACACTGAGGGTGCAATACTTCACATGGAATCTGTCAAATATAACAAACCAGGGGATGTAACGGCTGTTGAGAGAGGCAACATAAAATTCATGattTGGGAGTACAATGATGTGAATGATACAGGCTACCTAAATATGTCACTTGTCAACAAGAATTACAAGAGAGCGTATGACACGGAGTATTTCCACTGGAAAATTGCAAAGTTTGAAAATGACACTGAGGGTGCAATACTTCACATGGAATCTGTCAAATATAACAAACCAGGGGATGTAACGGCTGTTGAGAGAGGCAACATAAAATTCATGGTTTCAGCATATGGATACAATGATCACAGCGATATATTACCGCATCTTGTTCACACACAGAACTCCTCGCTAATAGATCTTGTCATTGACAAATTAGGGACCAACTCACATTTCTCACATGCAAGGTTTGCCGTCGACATCATTCTAGCCAGTCAAGACCCTAAAAACACCACCATGACTTTTGAATCGCACAAAAGTTTGGATGATGAATACACACCGGGAGTTTTTACAATGGTAGATCTTCAGACTCCCTCCAGTGTCTCAGGGGCCAAGGGGGGCTACATACAGTGGAGGCCTGTTGCGTACATTGCCAAGGAACGAGACCTCACCAACTCAACGGACGCCAACAATTACGGTCTGTCCAATGTCACCTATCCGAGCGCCGTCCTCAACAGCTCAGCTGTGTATGCCTTCTTCTCTTCTTCTTTGGAGAATATGTTAGTCCAGGAGACTGTGGTTTCGTTTGGGCTCAAGGAGGATGGGTTCTACAAGAAGACCAACTACACTTCCTGGACATTCGTGGTTGGATATGGTCATCCGCCAGATGATAAGTTCTCCCTCCTGGTGATTTTAGTGATCAGCATTGGACTAGGTCTACCAGCACTTCTCATCCTGGTCAGTGGAATCGTCATGGCAGTTCGTCGCGTTTCTCACAAAAATGATGATTTGTTTCTAAGTAGGTAA
- Protein Sequence
- MSKVAHKLPTIGDLWNSYQSGKLSPIRRLLGKSHVYMVSFTRGNTCRPVPQLSSSVNPGCNPDAGYCDKVTLVHVRADGPNDTLHYLWGFTGKPSIILALTSPNATLTINWKDFIFASVQAIEFSEKPVYSFGLVVNKIWEYNDVNDTGYLNMSLVNKNYKRAYDTEYFHWKIAKFENDTEGAILHMESVKYNKPGDVTAVERGNIKFMIWEYNDVNDTGYLNMSLVNKNYKRAYDTEYFHWKIAKFENDTEGAILHMESVKYNKPGDVTAVERGNIKFMVSAYGYNDHSDILPHLVHTQNSSLIDLVIDKLGTNSHFSHARFAVDIILASQDPKNTTMTFESHKSLDDEYTPGVFTMVDLQTPSSVSGAKGGYIQWRPVAYIAKERDLTNSTDANNYGLSNVTYPSAVLNSSAVYAFFSSSLENMLVQETVVSFGLKEDGFYKKTNYTSWTFVVGYGHPPDDKFSLLVILVISIGLGLPALLILVSGIVMAVRRVSHKNDDLFLSR*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01449641;
- 90% Identity
- -
- 80% Identity
- -