Tbar023811.1
Basic Information
- Insect
- Timema bartmani
- Gene Symbol
- TRERF1
- Assembly
- GCA_902151455.1
- Location
- CABFWB010001856.1:18884-34966[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.9e-11 3.2e-07 32.5 0.0 2 46 376 420 375 420 0.96
Sequence Information
- Coding Sequence
- ATGCCAAACTCGGAAGACCCGCTTCTCTCAAGTAGCCCCAAGGACTTTTGCAGTAGgaaaaagtttgattttggtGGCATTCACTCATTCAAACTTCTTGGAAATGGAATGGTAGATTTCGGGATGGCAAACTCTGGACTGACGGGAATCATGGTGGATAGTAATGGGGAGCTCAAGTTCTTCCAGGCCGCGAACTCTCATCCCGCTAAAAACATGATGGTGTCGGGTAGTGTTAGTACAAACATTAGCTCGGCGAGTGCGAGTATGTACCAGAAGCGAAGCGAGGTGGACTCTAACAAGCTGCGACTACTGAGTAAAGTGGCGGGGAgccaccatcaccaccatcacaaccatcaccaccaccataGTCCTCGGAACCAGAGGCCCAAACTGCAAGTCACGCTCGACAACTTGAAGGAGGAGGTGGATGATGATGTATTCCTCAGCCCCACAAGCATCCCAGCCAGTCCCATCAGGGTTGCACGCAAACGATCTCGGCCAGAGCCTCTGTATATTCTCCCTCACCCCGTGCCCTCATACCGGTCCCGGCTAAGGGCCCCGCGGTTGCAAGAGCCTGGGTCCTCCTCTCCTCCACCCCAGTACACCCCTCCACCCATGTTGAGTCCGGCGAGACAGGGGCAAGGACTGTTCTGGCAAGCCGTCAATGTGCCGCATTCGGCCAGTCTGTCACCTGCAACTTGGCCTAGCTCCACCACTGTCTCCAGGAATGGAACAATCGAGTCATGTGGCCAGGAAGAAAGCTCCATGCCTACCGAGACCGCTCCAGAGTCTGATGCTACCCCCCACATCAACTTGGGGCCTGACTTCCAGTGTGTGATACCACAGTGGAATCCTGACAGAGAGAAGGCGAACAGAGAACCTTCCTATGAGCACCTCCTCTGGGACCCTGGTATCAGCAAAGTCAGCACAGATTCAGAAGtggaCATGTACCTGGAATTTGCGTGTTGTGCTGCTGTGCCAGGCGGTGGGCGAAATAAAGAGTATGCCTTACACTTGCTACACATGTGTCATGGAAACATTCATGAGGCAATGTTAAAGTTAATGCAACCTACCCCCTTTTTACCTTCGGGCCACCCTTTGCTTGCATACGACTACTGTGAGAGCGATCGGTGGAGTGCGGATGAGATGGATGCCTTCCATCAAGGCCTGTTGAAACATGACAAGGATTTCCTTAGCATCGCACAGGAGATTGGCTCCAAGACGATAAAACAGTGTATCCAGTTTTACTACCTTTGGAAGAAAGTGTGTCCCGAGGAGTACAAAAGGTTACGTTTGATTAGACGAAGACAGAATGCAGACTATGATTTCGATGATATTAAAATGGAGGAGCCTCGATATAGCATTCCTGCCAATGATGTCGAGCTGGTATCAACAAGTTCGGAAACCAGACTCTTTGTCTGTGAATATCCGGATTGCTCAGCAAGTTTCAACTCACGGGCCGCACTGAATGGTCATATTCGTATCCACGGTGGGGGTGTGTGTGGCCGTTCTCCCACCCCGGATAAGCGGCCAGCGACCGCGACACCCCCTGCCCTTGGCGACCTTCTTGAGGAGTTTCCTTGCAAGATATGTGGGAAAGTGTTCAACAAGGTGAAAAGTCGCAGCGCCCACATGAAATCACATAGGCCACCTGATGCAGAGCCCAAGAAACCTAAACTTGACCCTCACAAAATGGAGGCGGCCGAGCAAACATTGAGTAGGGCCATGTGCGTGTCCTCAACCATTGGGGGAGGTGGGGGACGCCACCCCTGA
- Protein Sequence
- MPNSEDPLLSSSPKDFCSRKKFDFGGIHSFKLLGNGMVDFGMANSGLTGIMVDSNGELKFFQAANSHPAKNMMVSGSVSTNISSASASMYQKRSEVDSNKLRLLSKVAGSHHHHHHNHHHHHSPRNQRPKLQVTLDNLKEEVDDDVFLSPTSIPASPIRVARKRSRPEPLYILPHPVPSYRSRLRAPRLQEPGSSSPPPQYTPPPMLSPARQGQGLFWQAVNVPHSASLSPATWPSSTTVSRNGTIESCGQEESSMPTETAPESDATPHINLGPDFQCVIPQWNPDREKANREPSYEHLLWDPGISKVSTDSEVDMYLEFACCAAVPGGGRNKEYALHLLHMCHGNIHEAMLKLMQPTPFLPSGHPLLAYDYCESDRWSADEMDAFHQGLLKHDKDFLSIAQEIGSKTIKQCIQFYYLWKKVCPEEYKRLRLIRRRQNADYDFDDIKMEEPRYSIPANDVELVSTSSETRLFVCEYPDCSASFNSRAALNGHIRIHGGGVCGRSPTPDKRPATATPPALGDLLEEFPCKICGKVFNKVKSRSAHMKSHRPPDAEPKKPKLDPHKMEAAEQTLSRAMCVSSTIGGGGGRHP*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01445273;
- 90% Identity
- iTF_01445273;
- 80% Identity
- iTF_01445273;