Basic Information

Gene Symbol
Smarcc2
Assembly
GCA_902151455.1
Location
CABFWB010003108.1:66838-76718[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.7e-15 1.9e-11 46.0 0.2 3 44 41 82 39 84 0.95

Sequence Information

Coding Sequence
ATGAAAGAGGGGTTGAGTCCACTGGAAGGATCGGCCTTCCCTCCTGCCCACGCCGCTCAAGAGTGGTATGTTCGCAAGCCTGCAGCCCTCCGCAACAAAACAGCAGCCAGCCTAACCAGGGAATGGACAGAACAGGAAACTCTTCTGTTGTTGGAAGGACTGGAACTGTTCAAAGATGACTGGAACAAGGTGTGTGAGCATGTGGGCAGTCGGACCCAGGATGAATGCATCCTTCACTTCCTTAGACTGCCCATAGAAGATCCTTACTTGGAGGATCATGAAGCAGAAAGTGTGGCAGCAAAGGAATGGAATCAGCACGGCCAATCCACCTTCCAGGGAAAGTTTGGTTTAGGTATTGAGTCACTGCACAAGCATGATATGGTAGAGCTTCATCATGCTGATAGTACATTCTCTGTTGTGTTGCCAGAGGAATATCCACCAGAAGTCCTGGTAATTCATGTTGCAGCAATTGTAGCGCTACTCTTTTGTTCCTCCTGCGTGGTCTTGACGAGCTCAGAGGCTCGAGGCTTTGACCTCATCGAGACACTCTGGCTTTGA
Protein Sequence
MKEGLSPLEGSAFPPAHAAQEWYVRKPAALRNKTAASLTREWTEQETLLLLEGLELFKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDHEAESVAAKEWNQHGQSTFQGKFGLGIESLHKHDMVELHHADSTFSVVLPEEYPPEVLVIHVAAIVALLFCSSCVVLTSSEARGFDLIETLWL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01447505;
90% Identity
iTF_01447505;
80% Identity
-