Tcom019793.1
Basic Information
- Insect
- Timandra comae
- Gene Symbol
- nfxl1
- Assembly
- GCA_958496195.1
- Location
- OY292375.1:900309-902780[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 2 2.8e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 22 0.01 1.5e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 22 3.1e-07 0.0043 17.7 15.9 3 19 186 202 185 202 0.95 4 22 9.1e-09 0.00013 22.5 13.2 3 19 239 255 237 255 0.91 5 22 2 2.8e+04 -4.1 1.4 6 10 280 284 279 284 0.88 6 22 1e-08 0.00014 22.4 9.2 1 19 290 308 290 308 0.99 7 22 1.2e-06 0.016 15.8 18.3 3 19 345 361 344 361 0.93 8 22 1.1 1.5e+04 -3.3 0.5 7 11 365 369 365 369 0.87 9 22 2 2.8e+04 -5.3 2.2 5 10 384 389 384 389 0.88 10 22 5.9e-06 0.083 13.6 18.3 1 18 395 412 395 413 0.97 11 22 4e-09 5.5e-05 23.7 12.7 1 19 422 440 422 440 0.98 12 22 0.0002 2.8 8.6 6.4 9 19 488 498 486 498 0.89 13 22 0.0022 31 5.3 8.1 1 12 508 518 508 518 0.96 14 22 0.35 4.9e+03 -1.7 3.3 14 18 547 551 547 552 0.85 15 22 0.25 3.5e+03 -1.2 0.3 8 12 568 572 567 579 0.78 16 22 5.9e-05 0.81 10.4 4.4 1 11 588 598 588 599 0.97 17 22 1.8 2.5e+04 -4.0 1.9 15 18 613 616 613 617 0.87 18 22 3.4e-05 0.47 11.1 13.1 1 18 628 645 628 646 0.87 19 22 2 2.8e+04 -6.4 3.0 9 13 652 656 652 656 0.70 20 22 8.5e-06 0.12 13.1 12.1 1 18 687 705 687 706 0.88 21 22 1.5 2e+04 -3.7 0.2 12 15 721 724 721 725 0.75 22 22 2 2.8e+04 -5.3 1.8 6 10 736 740 736 740 0.92
Sequence Information
- Coding Sequence
- ATGGCGAGACGATACAGGGACGCCGCGGCAAAACTGCAAATGAATGTACAAAAACATCTGAAGCAAATGAAAGAAGTATCGTCTTCCGAAGATGAAGATCCCTATGAGCCGAATGTACTGGAAGGAGTGTTCCAGAGCTACTGGCGAGGAGGCGGTGACACCAACATGATTAACAGGACTAAGAATCTACTAGAAGAAGCTATTAGCGGTCGTTCTATTACTTGTCTCATTTGCATCAGCTCTATCAAGAGAAACAACGCTATTTGGACCTGTGAACACTGCTACTCCTACTTCCATCTCTCCTGCATACAAAAATGGGCAAACGACAGTATCAGTCTCCGCAGCGAAGAACATCAAGGTCCCATAACGGTGGTAGTTcctaaaaaaaacgaatggtGCTGTCCGAAATGCCGCAATTCGTATTCTAAAGAACAAATACCTCGTAAATATAGGTGCTATTGTGGTAAAACTGATGATCCTCCCTATCATCCATGGTTAATACCTCATACATGTGGAGAGGTTTGTGGAAAGAGGCTTTCTACTGGGGAAAATTGTAAGCACAAGTGTCTGTTGCTATGCCACCCCGGGCCTTGTCCTCCGTGTCCTCAGACTGTCAATGGAGTATGTTATTGTCAAAAGGAGTTCAAGAAAGTCAGATGTAGCTCTGCTAAGTGGTCTTGTGGCCAACAGTGTAAGAAAACTTTGCTGTGTCAGACTCATAAATGTGAAAATCTCTGTCATGATGGGGATTGCCCTCCTTGTAGCTACACAAGCACTCAGCCTTGCCAATGTGGCTCTGAGAAGTCTAAACGACCTTGTAATGACCCTATCTGGCAATGTAAGAAGATATGCAACAAACCATTCTCTTGCGGGTACCACAAATGTGACATACTGTGTCATTACGGAGATTGCGGTTCCTGCCCTAACTCTGGCATGAGATCTTGCCCGTGTGGAGCCAACCAGAGGTATGTCCAATGTCCAGATACCATGGAAACTTGCCTTGGTACATGTAATAAGAAGCATGATGATTGTGAACATAATTGTCCGGAGAAATGTCATAAAGGCCCATGCCCTCCTTGCCAAGTGTTGATTCAAAAGAAATGTCATTGTTTGACACATGAGCGCTCATTGCCATGCAGTAAGGAGTTCAAATGTGAGACCAAGTGCAGAGGGACCAGACCGTGCGGCAAACATGGTTGTGCAAGAAAATGCTGCAATGGTAACTGTCCGCCATGTGAGAAGATATGTGACAAGCCACTGCAGTGCAGTCGTCACAAGTGTACCAACATCTGTCACCGTGGCCCTTGTTACCCGTGTCCTAGAGAGTCCAAAATAACATGCAGATGCAAAGAGACTTACATCACAGTCCCGTGCGGCAGAGAGAAGTTTGCCAAGCCACCCAAATGCAGCCTCCCTTGCAAGATCAAATATAAATGTGGACATGTCGAAGAAAACAAGCATTCTTGCCATTTTGGTGATTGTCCACCATGCAAAGCTATTTGTTATAAGAAGTATCCACAATGTGGTCATGACTGCAAGTCCACATGCCACGAATATGTGCCTGTGGTGTTCAAACAAGTGGAAAAACCAGCCACACCTTGGGAAGTGCAGCCTCCTAAGACAAAAATAATGACTCTGGAATGTCCACCGTGTAATATGCCTGTCTCTGTCATTTGCTTTGGTGAACACGAGACAGATGACCAGCCGTGTCACACAGCAGCCAGGAGGCCTTGCGGCAGAGAATGTGGCAAACCTTTGGCTTGTGGAAACCACAGCTGTAAAATGATGTGTCACTTGTATGCTCCAGATCCTCATTATCCAAAAGTGCCTTATGTTTGCAAGCCCTGTGAGAAAGGCTGTGTTAAGCCCCGTCCAGTAAAATGTAGCCATAAGTGTGCTATTAGAGCATGTCACCCAGGAGAGTGTCCTCCTTGTGAAATATTGGAACGACTAACATGCCACTGCGGTTTGACTGAGCTCTACCTGCGCTGTAAAGAATTAAGCTCGGCCACTGAAGAAATGCTCTCTTGTAAGCAGCAGTGTCCTAAGAACCTCGACTGTGGTCACCGCTGCCGCAACACATGCCATCCCGGCGCCTGTAGCAAACAGACATGCGTCAAAAAGACAAAGGCTTACTGCCCATGTggaaacattaaaaaagaagGTCCATGTAACTCGGTCAAAAGTGGAGAGTTCAAAGTCGCGTGCGAAGAAAGTTGCGAGGCTAAAAAATTGGCGGCAAAGTTGGAAAACGAGAAAGAGCAACAGAGATTACTGCAGTTAGAAGAAGAGAGAAATAAAAGAGAACTGGCTGAATATGAATGGAAACTTAGCGGGAAAAAGAAGAAGTATAAAGAAAAGAGGATTGTTGCAAATAAAGATGACAGGTCTTGGCTCCGGAAATACTCAATTCCATTAATATCAGTTCTTGTTGCTATATTGGcgggaatttattatatattttacttgtGA
- Protein Sequence
- MARRYRDAAAKLQMNVQKHLKQMKEVSSSEDEDPYEPNVLEGVFQSYWRGGGDTNMINRTKNLLEEAISGRSITCLICISSIKRNNAIWTCEHCYSYFHLSCIQKWANDSISLRSEEHQGPITVVVPKKNEWCCPKCRNSYSKEQIPRKYRCYCGKTDDPPYHPWLIPHTCGEVCGKRLSTGENCKHKCLLLCHPGPCPPCPQTVNGVCYCQKEFKKVRCSSAKWSCGQQCKKTLLCQTHKCENLCHDGDCPPCSYTSTQPCQCGSEKSKRPCNDPIWQCKKICNKPFSCGYHKCDILCHYGDCGSCPNSGMRSCPCGANQRYVQCPDTMETCLGTCNKKHDDCEHNCPEKCHKGPCPPCQVLIQKKCHCLTHERSLPCSKEFKCETKCRGTRPCGKHGCARKCCNGNCPPCEKICDKPLQCSRHKCTNICHRGPCYPCPRESKITCRCKETYITVPCGREKFAKPPKCSLPCKIKYKCGHVEENKHSCHFGDCPPCKAICYKKYPQCGHDCKSTCHEYVPVVFKQVEKPATPWEVQPPKTKIMTLECPPCNMPVSVICFGEHETDDQPCHTAARRPCGRECGKPLACGNHSCKMMCHLYAPDPHYPKVPYVCKPCEKGCVKPRPVKCSHKCAIRACHPGECPPCEILERLTCHCGLTELYLRCKELSSATEEMLSCKQQCPKNLDCGHRCRNTCHPGACSKQTCVKKTKAYCPCGNIKKEGPCNSVKSGEFKVACEESCEAKKLAAKLENEKEQQRLLQLEEERNKRELAEYEWKLSGKKKKYKEKRIVANKDDRSWLRKYSIPLISVLVAILAGIYYIFYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00857272;
- 90% Identity
- -
- 80% Identity
- -