Basic Information

Insect: Timandra comae
Gene Symbol: -
Assembly: GCA_958496195.1
Location: OY292358.1:8658812-8667156[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.009 0.81 10.9 0.5 3 23 606 627 605 627 0.90

2 23 6.8 6.1e+02 1.8 1.4 4 23 982 1003 980 1003 0.84

3 23 0.043 3.8 8.8 0.6 1 22 1008 1029 1008 1029 0.95

4 23 0.00034 0.031 15.3 1.2 3 21 1102 1120 1102 1121 0.96

5 23 0.28 25 6.2 2.4 3 23 1130 1151 1128 1151 0.95

6 23 0.0083 0.74 11.0 0.2 3 23 1174 1195 1172 1195 0.96

7 23 0.0028 0.25 12.5 0.3 1 23 1201 1224 1201 1224 0.92

8 23 0.12 10 7.4 0.0 1 23 1249 1272 1249 1272 0.90

9 23 0.0051 0.45 11.7 3.5 1 23 1277 1299 1277 1299 0.97

10 23 0.0088 0.79 10.9 0.2 1 23 1305 1328 1305 1328 0.95

11 23 0.0021 0.19 12.8 1.3 1 23 1341 1363 1341 1363 0.97

12 23 0.00016 0.015 16.4 1.8 1 23 1420 1443 1420 1443 0.97

13 23 0.0019 0.17 13.0 2.7 1 23 1503 1526 1503 1526 0.96

14 23 0.0068 0.61 11.3 1.4 2 23 1551 1573 1550 1573 0.95

15 23 0.014 1.3 10.2 0.1 2 23 1579 1601 1578 1601 0.94

16 23 0.047 4.2 8.6 0.2 1 21 1645 1665 1645 1666 0.94

17 23 0.0011 0.1 13.7 0.6 1 23 1676 1698 1676 1698 0.93

18 23 0.00014 0.013 16.6 0.3 2 23 1785 1807 1785 1807 0.93

19 23 1.1e-06 9.4e-05 23.3 1.3 3 23 1814 1834 1813 1834 0.98

20 23 0.087 7.8 7.8 0.9 1 23 1853 1876 1853 1876 0.94

21 23 0.11 10 7.4 0.0 1 23 1898 1920 1898 1920 0.97

22 23 0.025 2.3 9.5 0.6 1 23 1926 1949 1926 1949 0.95

23 23 0.00024 0.021 15.9 0.4 1 23 1957 1980 1957 1980 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.009	0.81	10.9	0.5	3	23	606	627	605	627	0.90
2	23	6.8	6.1e+02	1.8	1.4	4	23	982	1003	980	1003	0.84
3	23	0.043	3.8	8.8	0.6	1	22	1008	1029	1008	1029	0.95
4	23	0.00034	0.031	15.3	1.2	3	21	1102	1120	1102	1121	0.96
5	23	0.28	25	6.2	2.4	3	23	1130	1151	1128	1151	0.95
6	23	0.0083	0.74	11.0	0.2	3	23	1174	1195	1172	1195	0.96
7	23	0.0028	0.25	12.5	0.3	1	23	1201	1224	1201	1224	0.92
8	23	0.12	10	7.4	0.0	1	23	1249	1272	1249	1272	0.90
9	23	0.0051	0.45	11.7	3.5	1	23	1277	1299	1277	1299	0.97
10	23	0.0088	0.79	10.9	0.2	1	23	1305	1328	1305	1328	0.95
11	23	0.0021	0.19	12.8	1.3	1	23	1341	1363	1341	1363	0.97
12	23	0.00016	0.015	16.4	1.8	1	23	1420	1443	1420	1443	0.97
13	23	0.0019	0.17	13.0	2.7	1	23	1503	1526	1503	1526	0.96
14	23	0.0068	0.61	11.3	1.4	2	23	1551	1573	1550	1573	0.95
15	23	0.014	1.3	10.2	0.1	2	23	1579	1601	1578	1601	0.94
16	23	0.047	4.2	8.6	0.2	1	21	1645	1665	1645	1666	0.94
17	23	0.0011	0.1	13.7	0.6	1	23	1676	1698	1676	1698	0.93
18	23	0.00014	0.013	16.6	0.3	2	23	1785	1807	1785	1807	0.93
19	23	1.1e-06	9.4e-05	23.3	1.3	3	23	1814	1834	1813	1834	0.98
20	23	0.087	7.8	7.8	0.9	1	23	1853	1876	1853	1876	0.94
21	23	0.11	10	7.4	0.0	1	23	1898	1920	1898	1920	0.97
22	23	0.025	2.3	9.5	0.6	1	23	1926	1949	1926	1949	0.95
23	23	0.00024	0.021	15.9	0.4	1	23	1957	1980	1957	1980	0.96

Sequence Information

Coding Sequence: atGAGTGTGAACTATGATCGTGTTTGTAGACTGTGTTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACACGGAACCTTCCGTCCTCGCTTCTAAAATCAAGGATTGTGTAGCCGTACAGATAAACGAAAATGACAACCTGCCTACAAATGTATGCAGGAAATGTATGGACAATGTCAACAACTGGCATATATTCAAAACTGTATGTGAAAAGACACAAAACAAACTACTGTCTCTGATTGAAAAGGATGGAAGCCTACTAGAAGAGGTGAAAATTAAAAGTGAACCATTGTCTGATGAGGCATATGATGAAGTGGCTATAGATGGGTCATACCCTGATGTTGAGaATGCCGGTCCGGCAAGTAAACTGCAGCCTGAAGGGCCCCCAATCTTGGCATCATTGGGACTTACACCAAAGAGTGATAAGAAATATGTGGATCCAAGAAAGGACTGGCAACGGGCTCACGCTATTCTGGACATGGTTCAAGACAGTGATGCAATTGATTCCCTCGGATCTGTTGAAGAGCATGACAATGTTTATCATTCTGACCATGAATCTGAATCAGAGTCCGAACTCTTAACTAATATTGACAGTACATACACTGATTGGAACGACGGTTATTTGTGCCGTAACAACAAAGTTATATCAGACCATCCAATCAATGATTCTCTCGAGTCTAACTCATCGACAGCtaaaaaacgtaaaatattaCACACGAATTTTGACCTTCCCAAAAATGCTTGGCAGGCTCTGATCACAGATGATCTACTAGAACACATTGTAGTTTGCACTAACaacaatattgttaaaaacaGAACTGCTAGCCTAGTGACCAATGTTGCTGAAATTAAAACTGTTATTGGCGTTTTGTATTTGCATGGAATATTGAGACCGACatatgaaaatatatcaaCTTTGTGGGATAGCAATTTGGGAGTATCCTGTGTTGGCCGTTATATTACTTTGGACCGATTCAATTTTatcttagaaaatattaagtttgataatgatgatgatatagaGGAGGAAGATCCGTTGAGGCGAATGCGTACTGTGTTTGAAATGTTTGCCATGAACTGTAGAAAAGCTTTGAAAGTTGGTGACGAAGTCGTTGTAGATGAAGTAATCGTTCCAGTTTATGGGCCTTGTCCATTGCGCTacaatattgataaaaaacctttgaaacaaggaataaaattagttttgctAGTCGACCCGCACACTTTCTACGTCAGCAATCTAGATGttgtatcaaaattattggAGCCACAAGAGATTGTCGAAAAAGTTACTCAACATTTGAACAAATCTGGTAAAACAATCATAATGGACAGCTGGTACTTTTCAATACCATTAATGCAATCATTGAAGAATAGTAACTTGTACACAAATGCTGCTCTACACCCGCAAAGCGGTGATGTTCCTCCAATTTTCTTTTCTAAGTACAGAAAAGACCATCAGTTTTTAACGGGATATTCTAATAATTATTCTATAACATCATACATTAACTCGGAGAATAAAGTAACTAATGTCATCACAAATGATCCAAAGTACAGCAGGAAGGGGTTGAATATGAAATTCAGTTCAGTGTCTGTTTACAAGAAGAATCAATCTGCGGTTGAAGGGGTGGAAAGTGATAAAGATGAAGAGGAAGAAGAATATGAGGAGGAGAGTAATGAGACGCCTCAACCGGTGAAAGTGCCTCATATGCCCGAGGTATCGATCACCGTGATGCGGCCCACGGGGGAGACGCTCCACGCCCGCCAAGGTATACAACAGATAGCCTCTAAGGACTGCCTCATCTGCGGCCGCTCCTACAGATACTCCCACAACGCACGCAGACACGAACTGGCCGCACACAGCTTCGACAGATACaccaacaaaataacaaacaagaGGACGCATACGCGTTCGTCTCATATGCAACCCAAACTCAGACCAAACCCGTTCAATCCCAAAGCGCGACTCATGCCCAATCCGATTAATCATAAAATGCAGTTAATGTCCAAACAAATGGCTGGTAAAGTAATTCCGACTCTGAATCCACCGAAACCAATACCGATTAAGACTTTTAAAACAGCCCAGAACAATTTGCCTTATCCTCTACGTATCAAAGCACTCAAAGACTTacaaataaagaagaaagaaccGCACATACTAAAGACGTTGCTGACATCAAAACCTGAAGTTTTGGTATCAGAACCGGAAATTATGAACTCGGGACCAGAAAGCCCTGAGACATTGATATCAGAACCAGAAATCGCATCGTTCCAAGTAGAAGCTATTCTTTCTGAACCTAATGAGTACGATCAAAATCAAGACGAAGACGCCGAAATGGAATTATCAAATAATCAGAGTCAAAATTATGATACACTTGATATGGAGTCTGATAATGAAATTGAAATcgcaagagaacaagaaaacGATTGTGATAATGGAGATAATAATGAGGAAGATGATACACAGCCTGATGATCATCTGCAGCAAGAAAAAGACGAGAGTGACAATGAGAAGGAAGCTGAGACTGGAGACAGTCAGAATGGTGAAAACTATGAACCTAGAGATGATGACGAAGCCAATGAAGGGGAAGGAAACGAAGAAGGAGATAACGTAGAGCAGTCGCAACAAGACGAAGAAAATGATTACGACGAAGATGGTCCACAGGACAGTTTAGCACCAGTTGTAGAAATAAACGAAGAAATGCAAAATAACGCGTATAATAGCGAAATGAATGAGGAGGAAGAGGAAATGGAAGATACAAACGCGGAATTAAATGACACTGAAGAAGCAGGGGAGGAAGCAGGAGAGGACGGAGAAGAAGGAAAAGAGACTGACGCCGAGAAAACTTATATCACATCAGAACAAACAGAATTCATCAAAAAATATCGCAACATCATCGAACAAATCAACACCAAGAGATGCCTTTGTTGCAATAAAGAGTATCCACGCAGAAAAGCTGTCATACAACATCTGCAGAAAAATGGTCATAAAGTTCCTAAACATACGTGCTATAACTGCGTGGTTACTTTCACCCATATTGGCGCTCTACTAAGTCACATGAGATCAAACTCGTGTACAGATTTATGGAAAGTCATATATGAAAAGAATGGTATCACAGAAGATATGGTTATTGATGGGCCTAGAAAAGTTCAACCAAAGGATATTTTCAACGCACGGTCATATGCTTGTAGGCTGTGTCCAGCTAAATTCCAATTGAAACAATCTATTATGAAGCATGTGTTTGATTTTCACGAGGATGGTCAATCAGCAGTGCCTCTCGGTTGTGTTCACTGTCGCGCAAGCTTTAAAGACAAGTCTTCACTGAAGAAACATATTCGTATCGGTGAATGTACAGTTTATGTCCACTGTGATTTATGCTCGGTACAGTTCTCGAACATGCATCAGTTCACTGAGCACGTTTCCACAGTTCACGCTGATGATTTCGTAAAATCAGAAACTGAAAGTCAAAACAAATGTGTCGATGGCCGCGTCACTGACTGCCCGGTATGCGGCAAAAAGAACAGCAACTATCTGAATTTGGTCAAGCATTTAAGAGTCGCTCACAACGAAGATAAACCTCATTACTGCCAAAATTGTGACGCCAAATTTGAGCAAGCTGGTGAACTTAACAATCACATATACGCTGAACATTCTGAACAAGCAATTGGTTCGTCTACAGAACCTGATATGTCTCTTGTAAAAGAAGAGGCCGAGGAATATCATTACTCATGCACTGAATGTAATGCTATTTTTGAAACTGTAGACGCGTGGACTGACCACCAAGTGGCAGAACATAATCAAGTTGCTCATCATTGTGACCAATGTGACAAAAAGTTCCTTCGTCCTTCAGAACTTGCAGAACACAAAAATACTCACCTGAGGGTTAAGTTTTATCCTTGTAGCATCTGTTCTAATTCATACAGCACACCTCAAAAATTATCTGAACATGTACAACAGGCTCATCCTGGCCTTGGAGTTAATGCTAGCACGGAGTCCGAGTTTTTCTGCGATATATGCATAAGGTCATTCAAAAGTCGCCAGGCTTATTCAAATCACATGCGTATTCACGCTAAAGTACCCACTACAAACAGGAAACCAGGAGAGCCTAAAGGATTCGATCCTCGTATAATTGGTAAACcgattaaacaatttaatatggcTCAACATCAACAACAACAGCAGCAACAACCCGGTTTCGTTAACTTCAAGCCAAATATTATTGTTCCTAACGCACCATACTCATGTGATATTTGTGGTAAAGGTTTCATgcacaagaaaaatatatggaaacataaaaaagttttacacGCAGATATATTAAATGATAGAAACGACAGTGAAGAAAATACTATGCACGCCTCCACCGAAGATGACGAATACAATGTCGACGAAAATGGCACTTTAACAACGCCACAATTTAACAGTTTTAATTTCACAAATTTCGCAAATAATGTTCAACAAACTCCGCAGCAAGATGCTTTACCATTCTCCTGTGATTTATGTTACAAACGATTCCCACTGAAATCTAGTTTGTTTAAGCACAAGCGCGCTAAACATGGAATCACAAGCACTAGTTCAACCAACAGTAATGATGCTTTCCAACCAACACCGGGTGAAGGTGGACGGTCGAGTTGCACCATCTGCAAAATTAATTTCCCCGATAAAAAGTCTTACTATCGTCACAGAAAGAATGTCCATAAATCAGCTACACAAATGTGCAAAATATGTGGTAAACCTCTCAATAACTCTTTGGAACTTTATGAGCATCTAAAAGCTGCTCACGCTCGGGAACTATTGGGTTACGATCCTAACCAGGGATCAAGTAAATCTCAAGACGTTTCACAAGATATGGAAGGGGATTATGACAATGATCAGGAGTCGTTAGACCCCAGTAGCGATTACCAAGCACGCTATCCCTGTGATGCTTGTGGGAAACAGTTTGTGGGCTTATTATCATTACAAAATCATCAGTGCGTTAATCAATTACCAAGCCAACCGCAGACATTTGATTGTGAAATTTGCCATAAGAGTTACACTTCAATCGCTGCTTTGAAAAGTCACCGAGGTTGGCATTTACGTTCCCCTGACGGCAAAGCGGCTGCTAACAATAGCGGTCTTTGGATGCCTCAGCACAAAGTGACTAGTAAAGTGAGTAAACATGAGGTCGTCGATCCTGTGCAGTTGGCCCGCGTCCAACACACTACACCCACTGTAGTGCCCAAAAGGAGGCTACCGCCGGAGGTCGAAGTGACGGTCGTCAATCCAAATAAAAAGTTGCGCTCAGACGACTCTGTCGAGTTGGACCAAAACAGTGATGCAATCGAGGGCAGATATTGTACAATATGCGACAAAGAATTCACTAAACGCGCCGCCTACATGCGTCACATGGAGGAGGTTCACCAACCGAATTCAGTGTTTTGTCCCGTATGTGAAAAGAGTTTTACACGAAAATCGACGCTTTTAGTTCACATGAAAAAACATTATGAGGGTGGTGAGGGTAGCTCTTCTATGAACGCCCAGTTGGATGAGGATGGTCACTCGTGTGAAGTATGCGGAGTGCAGTGTGATAGCGAGAAAGATTTAATTGCACATAGAGTGCGAAACCACGGGGAGGACGAGTCGGGCGACTCGGAGGACGATGGTAATGTTCCTATCGCACAACCGGGAGAGTTCACTTGTGGACAGTGCGGCGATGGCGTCGCCACACCTCGCGATCTAATAGCTCACCGCACGATGCATGCTACACCCACAAAGTTCTTCTGTAATATTTGCAAAGTGTACTTTGCGAGAGCCCTGGACCTGTCGTCTCACACGCGAGCGCGACACGCCGACAACGAAAAGGTTTTCTTCCCTTGTGCCATGTGTGATCGATTCTATATGAACAAAAAGAGTTTACAGCGACACATCGAAATGGCACACTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSDDTEPSVLASKIKDCVAVQINENDNLPTNVCRKCMDNVNNWHIFKTVCEKTQNKLLSLIEKDGSLLEEVKIKSEPLSDEAYDEVAIDGSYPDVENAGPASKLQPEGPPILASLGLTPKSDKKYVDPRKDWQRAHAILDMVQDSDAIDSLGSVEEHDNVYHSDHESESESELLTNIDSTYTDWNDGYLCRNNKVISDHPINDSLESNSSTAKKRKILHTNFDLPKNAWQALITDDLLEHIVVCTNNNIVKNRTASLVTNVAEIKTVIGVLYLHGILRPTYENISTLWDSNLGVSCVGRYITLDRFNFILENIKFDNDDDIEEEDPLRRMRTVFEMFAMNCRKALKVGDEVVVDEVIVPVYGPCPLRYNIDKKPLKQGIKLVLLVDPHTFYVSNLDVVSKLLEPQEIVEKVTQHLNKSGKTIIMDSWYFSIPLMQSLKNSNLYTNAALHPQSGDVPPIFFSKYRKDHQFLTGYSNNYSITSYINSENKVTNVITNDPKYSRKGLNMKFSSVSVYKKNQSAVEGVESDKDEEEEEYEEESNETPQPVKVPHMPEVSITVMRPTGETLHARQGIQQIASKDCLICGRSYRYSHNARRHELAAHSFDRYTNKITNKRTHTRSSHMQPKLRPNPFNPKARLMPNPINHKMQLMSKQMAGKVIPTLNPPKPIPIKTFKTAQNNLPYPLRIKALKDLQIKKKEPHILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVEAILSEPNEYDQNQDEDAEMELSNNQSQNYDTLDMESDNEIEIAREQENDCDNGDNNEEDDTQPDDHLQQEKDESDNEKEAETGDSQNGENYEPRDDDEANEGEGNEEGDNVEQSQQDEENDYDEDGPQDSLAPVVEINEEMQNNAYNSEMNEEEEEMEDTNAELNDTEEAGEEAGEDGEEGKETDAEKTYITSEQTEFIKKYRNIIEQINTKRCLCCNKEYPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRSNSCTDLWKVIYEKNGITEDMVIDGPRKVQPKDIFNARSYACRLCPAKFQLKQSIMKHVFDFHEDGQSAVPLGCVHCRASFKDKSSLKKHIRIGECTVYVHCDLCSVQFSNMHQFTEHVSTVHADDFVKSETESQNKCVDGRVTDCPVCGKKNSNYLNLVKHLRVAHNEDKPHYCQNCDAKFEQAGELNNHIYAEHSEQAIGSSTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSEHVQQAHPGLGVNASTESEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFDPRIIGKPIKQFNMAQHQQQQQQQPGFVNFKPNIIVPNAPYSCDICGKGFMHKKNIWKHKKVLHADILNDRNDSEENTMHASTEDDEYNVDENGTLTTPQFNSFNFTNFANNVQQTPQQDALPFSCDLCYKRFPLKSSLFKHKRAKHGITSTSSTNSNDAFQPTPGEGGRSSCTICKINFPDKKSYYRHRKNVHKSATQMCKICGKPLNNSLELYEHLKAAHARELLGYDPNQGSSKSQDVSQDMEGDYDNDQESLDPSSDYQARYPCDACGKQFVGLLSLQNHQCVNQLPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDPVQLARVQHTTPTVVPKRRLPPEVEVTVVNPNKKLRSDDSVELDQNSDAIEGRYCTICDKEFTKRAAYMRHMEEVHQPNSVFCPVCEKSFTRKSTLLVHMKKHYEGGEGSSSMNAQLDEDGHSCEVCGVQCDSEKDLIAHRVRNHGEDESGDSEDDGNVPIAQPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -