Tcom020700.1
Basic Information
- Insect
- Timandra comae
- Gene Symbol
- Snapc4
- Assembly
- GCA_958496195.1
- Location
- OY292376.1:4409944-4412202[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.36 4.5e+02 1.7 0.0 22 42 220 241 189 244 0.77 2 5 1.2e-09 1.5e-06 28.8 0.4 1 44 251 296 251 298 0.94 3 5 2e-07 0.00025 21.7 0.1 3 43 306 350 304 352 0.95 4 5 3.8e-08 4.8e-05 24.0 0.0 1 43 357 399 357 401 0.98 5 5 9.7e-06 0.012 16.3 0.0 3 45 410 454 409 455 0.95
Sequence Information
- Coding Sequence
- atggaTTCAGACAGCGATTCAAGCATTGATCATGAGGAAGAAATGTATGAAATAAACCAGTTAGCTGCATTAGATAAAGAGTTTGCTCCAATCGATACTATATCTTTACCTTCTACTGTGTCGCAGACTACAATAAACTCTTCAGCCCACCATTTACAAGAAATAGCTAGAATCGATTCAGCCTTAGCTCTCAACAAGGTATTAGAcgacaaatataaaaaattggaGAACGTTTTAAAGCAACGACTTCAAGAATGCCGCGAGAAATTTAAACGAAATAGTGAGTTATTTCGTGTCCAACCTAGAAATGAACAGTTTCGGTATCAGAGTTGTGGCAAACCTTATTTCAAGGACCAACTGTTTTTCACACCGCCGGACAATGCAGATActattctaatgaaaaaatcaGATATGTACGACTTCTCTACATTAGTAACAGTACCCGGTTGGACAGTCCGAGATAAAAATGAGCTTATTAACGTCCTACTTGAAATGTCTCAAGCTGCAAGAAAAAAGGAATTAGAGACAAAACTTGTTGAAAttatcaaagaaaataataacacaTCTAAGCACGAAGTAGAACAATTACAAAAAGAAATCTCATTGCTCAAGAAAAAATCGTTAGCAGAATTAGCTTTACCTATTGAAGAAGAATACGATTGGGAGACTGTGGCTAATGTACTGAATAGAAGACATACACCTAGTGAGTACAGGTCATTGTGGAGACTGTTTTTTCATccatctattaataaaaatcattggACCAGAACAGAACATCAGGAGCTTCAAAGGATTGCTAAAGAGCAAAATACACAAGACTGGGATTTAATAGCAGAAGAATTAAACACGGGCCGCACGGGATATCAATGTTTTGTATACTTCAGGACAAATATAACAAGTGCATTTAATGGCCGTAGATGGACAAAAGAAGAAGTAGAATACCTTAAAAGgattatagatttttataaacagGGTAATTACATTCCATGGGGCAAGGTTGCCACTGCAATGGATAACCGCACAAAGATTcaagtttacaataaatatacaagGTTGACTGAACAACGAAAAGGCAGGTTCCTACCAGAAGAAGACTCCgttatacttagttatattGATGTATACGgacttgattttaaaaacatgtcTCAGTATTTACCTGGGCGATCACAGTTACAATTGCGGACTAGATACCAAATACTAGCAAAAATGGCAACATCATCAGCCACATGGTCAATTGAAGATGACAGAAAACTATTACAAATGATGGCCACTCAGGATTCAACAGCTAACTTTTCAATAGTGACTAAACACTTTCCTGGTAAAGATCGCATGAACATTAGGTCAAGGTACTTAACATTAGCTAAATGGATGAAGACTCACCCCCACTGTGATATTGAATTAGCACCACGGAGAGGCACTAGAAGACTAGCGCATGGACAAGTGGAGACTAATCTGAAACAAGCTATTGAAAACTTGAAAAACAGAATTCAGAcagaagtaaataaaacaagggGTAGAAAAAAGATCACCAAAAAGTCATCAGAAACTGAAATAGAAGATGCTATTGTGTCATTTTTGGTAAATGAATCTGCACAAGAATCTGAGAAAACCAGCACAGACTGTGCTGTAGCTAACCAATGTGCAATGCAGGACAGTCAATTGGATAAAGACtcactgtatctattaaaCTTGAGACACCTACTGATTCTTCTTAGTTCTCGTTTAGACAAAGACAAGTTTCTAGCAGATAAAAATGTTAGCGCAAAGTATGCTAATCTGGTTGAACCCAAGATAGAAGATAATTTAGTCAAAGTGAAATCTTATTCTAAGAAGGAAAGTGTAAGAGTTGTACAAATTGGGACAGGACCAACTGTATGGGGTGACAATAGATTTCTATCTCCTAAATACATGTTGCCTCCACACCTTGCTAACATCACCGGCTGCAGAGTGTTGATGAAACATATAAGCACCACCTGTGGTGAGCCCAATGACATCAACATAAGCTTAATGATGAGAAGAAATTGTGTATTTAAAGATGCCATGAATATGCTGAAACGGAGGTTCACAACATTATTCCTATGGCCGATATTGCTCTCTAATGTTGCAAAGAAATCTGATGATACAGTTGAGATTATGCCTACACCAAACAAAAGGTCACGGAAATTAATAACTATGAATGAACTAACTTCAAATGCTAGTGATGGTCCTACTAATGCTAAACGGTATAAAAAAGCTAAGCAAtgcaaaaacaaataa
- Protein Sequence
- MDSDSDSSIDHEEEMYEINQLAALDKEFAPIDTISLPSTVSQTTINSSAHHLQEIARIDSALALNKVLDDKYKKLENVLKQRLQECREKFKRNSELFRVQPRNEQFRYQSCGKPYFKDQLFFTPPDNADTILMKKSDMYDFSTLVTVPGWTVRDKNELINVLLEMSQAARKKELETKLVEIIKENNNTSKHEVEQLQKEISLLKKKSLAELALPIEEEYDWETVANVLNRRHTPSEYRSLWRLFFHPSINKNHWTRTEHQELQRIAKEQNTQDWDLIAEELNTGRTGYQCFVYFRTNITSAFNGRRWTKEEVEYLKRIIDFYKQGNYIPWGKVATAMDNRTKIQVYNKYTRLTEQRKGRFLPEEDSVILSYIDVYGLDFKNMSQYLPGRSQLQLRTRYQILAKMATSSATWSIEDDRKLLQMMATQDSTANFSIVTKHFPGKDRMNIRSRYLTLAKWMKTHPHCDIELAPRRGTRRLAHGQVETNLKQAIENLKNRIQTEVNKTRGRKKITKKSSETEIEDAIVSFLVNESAQESEKTSTDCAVANQCAMQDSQLDKDSLYLLNLRHLLILLSSRLDKDKFLADKNVSAKYANLVEPKIEDNLVKVKSYSKKESVRVVQIGTGPTVWGDNRFLSPKYMLPPHLANITGCRVLMKHISTTCGEPNDINISLMMRRNCVFKDAMNMLKRRFTTLFLWPILLSNVAKKSDDTVEIMPTPNKRSRKLITMNELTSNASDGPTNAKRYKKAKQCKNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -