Tcom000373.1
Basic Information
- Insect
- Timandra comae
- Gene Symbol
- Jarid2
- Assembly
- GCA_958496195.1
- Location
- OY292353.1:4323120-4348384[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.1e-20 1.8e-16 60.9 0.0 6 89 1034 1115 1029 1115 0.91 2 2 0.032 80 4.3 0.0 73 89 1527 1543 1511 1543 0.80
Sequence Information
- Coding Sequence
- ATGGTGCACAAAGTGACGTCGCACTTCATTATCACCATGACAAATCTGTCCATCCCTCTCGCGCTTGATCAAGCTTATAAGTATGAACGAGACATTgttataaGAACGCATAGAAAGGAACCGGTAGTGATATTAGAAAGACTATTGGGATATTCCGAACcacaaataattaatgataACCCGGTAACTCTTAATGTACAAATGCCGAACCATATTGGGAACGCTAGTATCCCCGTATCCAGGCATCCTCCAAGAACTCCTCCTGTTGCTAGTTCCACCCCAAGACAAAGTGGAACAAACCCGCCCGCTTACATGCATCTAAGATCTCGTATTCTGACGAGATTACAAAGCAAGCCGACCAAACCCAAATTGACTGGTTCGTTAATTCGTAAACAACATGTCACCAAAAAACGCACTCTCTGTAAACGCCGTCGAAGACGATCTAGCTGCACAGAGGACAATGTACCTCTTCAGAATTTTGTTAGCCACTCGCGTgtactttgtaataaaaaacgcCCATTATCGGACAATGTTTCAAAAAACAAAGACCAATCTAaacctaaatataaaaagcacGCTGGGCAGGAACAACTATTACCATCACCAAGTCAAATAAATAGTGTAGTAAACGCCGACAATTCAGAGCCGTCAACTTCGACACATATTCAGCGTCCAACAATCAGCGGAATGTGTACGAGAAGTAGATCCTATCTGACAGAAGGTAACGTCGCTATACTGCCGCAGCAAAGCTCCGAACCGAGAGAAAATAATGTGAATAATGTGACTGAAGATAGGGGCCCAATAGGTGCAATGGCACCACCAGGAGTATTTGAACCGACTAGAGAGCCGTCTGAATTTGATTGTAGCGAATCGGTTGATTTAATAGGTGCACCTTTTCGTGGTTGGTGCAACGAAAGGATGGACACAACAGAAGCAGCCTTACATCGACAGTCGACAGTCGCAACTCCTTCGGTATGTACCGATATACCGCTGGATGATGGCTCAGTTTGCTCCCTTGATATAACAAACGGATCGGCGGACGCCTGGTTTGACTCTTACCATAACAGGAAATTCAAAGTGCCCGAACCGCCTAGGGAACGCAGAACACACTTGTCACAAAGCGAGAAGATATTGAGGAAATATTGCCCTGCTTGGAAATACACTTCTATGGGCTCCATATCCAAAATCGCCCCGGAAATTATAGAAAGGTTCTGCGGAGGGTGCTCTCGCTGCTCTATCATAAAAAGGGTAGTAAACCTCGCTAAACATATACCTAAAGCAACTTCCGATTCGGGGCCAGCGCCAAATACACCAAATACCCAACAAGATACGTCTACAGCCACTGTCGGCACCACAGAGGCATTGGATTCTTCAACTCAATGTCAAGGTGTACCTGAAGTTTTGCAAACCTGCTCAAATGTGAATGATATTAATGTATATGACTTTAACTGTGAAGATGAAGAAGTTCCGAGTAGCGCACCAACGCCATATCGAACAAGTAGATCTAATGAGCCAGACAATAATTCTACCCCAAATCAACACTTATTGGATTTATTCCCTAAGGAAaactatatattaaaattaaaagaatgcGGAGATGAGCATAACAAACATATGGCTATTGAAGTTGTCCATAGGGataatttagataaaactGTGCCTCTTTCAGAGGTTTCAGAAGATAATCGGTTAATGCTCGAGCGCTTTGCTAACTCACTCAAAAATGTTCGTAGTATGTTGACTGAAAAGAACAGTGTTAGCGAAAAGAACTCTCCTAACAACACCCAAAATATAATAGAGCGATCAAAAGAACATCCTCTTGGTATCAACGTCATGTGCGAAATTCCCATGTATTCTGATGGTGCTAATAACGCGTCTTCTATGGCAGCGGCCCGGCCTTTTTTAATTCCTGCCCCGTTAAGAAAGCCTTACATACCATTTGCCGGGCCCTCCGCACCAGCGATCCAGCCTTCCAAATCAGTGGCCCGGCCTTCCGCACCAGCGACCCGGGCTTCCAAATCAGTGGCCCGGTCTTCCAAGTCAGTGGCCCGGCCTTCCAAATCAGTGGCCCGGCCTTCCAAATCAGTGGCCCGGCCTTCCAAATCAGTGGCCCGGCCTTCCAAATCAGTGGCCCGGCCTCCCAAATCAGTGGCCCGGCCTTCCAAATCAGTGGCCCGGCCTTCCACACCAACGACCCAGCCTCCCACATCAGCGGCCCGGCCTTCCGCACCAGCGATCCAGCCTCCTACATCAGCGGCCCGGCCTCCCAAATCAGTGGCCCGGCCTTCCAAATCAGTGGCCCGGCCTTCCGCACCAATGACCCAGCCTCCCACATCAGCGGCCCGGCCTTCCGCACCAGCGATCCAGCCTCCTACATCAGCGGCCCGGCCTTCCGCGCCAGCGACCCAGCCTCCTACATCAGCGGCCCGGCCTTCCGCACCAGCGACCCAGCCTCCTACATCAGCGGCCCGGCCTTCCGCACCAGCGACCCAGCCTCCTACATCAGCGGCCCGGCCTTCCGCGCCAGCGACCCAGCCTCCTACATCAGCGGCCCGGCCTTCCGCGCCAGCGACCCAGCCTCCTACATCAGCGGCCCGGCCTTCCGCGCCAGCGACGCAGCCTCCTACATCAGCGGCCCGGCCTTCCGCGCCAGCGACCCAGCCTCCTACATCAGCAGCCTGGCCTTCCGCACCAGCGACCCAGCCTCCTACAACAGCGGCCCGGCTTGCTTCACTAGCGGCCCGGCCTTCCACGTTAGCGGACTGGCCTATCACACCAGAGGCCCAGCCTTCAACGTCAGGGGCCTGGCCATCCACATCAGCGGTCGCACCATCGACATCAGCGGCCGCGTCTTCCACCTCAGAGACACGAAACGGCATATTGGATGCCCCCACCTTCTACCCGACGGCAGAAGAAATGTCGatgaattttatCGACTACGTGCAGAAAATAGCTCCAGAAGCTACCGAATACGGTATATGCAAGATCACAATACCTAAAGAGTTAAGGCCTGAATTCAACATGAAAAACATTCAATTCAAATGCAACAACCAATACATATCAATTATGTATCAGAGATGGGTTAATATATCACGACAGATGACAGCAATTAAAGCCCACCTCGGGACTCAAAATGTCAGCTTCACCAGACCTCCTCTGTTCGAAGGAGTAGAGGTAGATTTGGTAAAACTGTACCATGTAGTACAGTCGTACGGCGGTCTCAAAGCGGTTATAGAGCAACAGAAATGGCCGCAAGTCGCAGAAGACATGCGGCTTAACTCTGGCCGATTTAAAGCGCACCTAAAGCTCgacaaaatttattgtaagcACTTGTTGCCTTACGATACGTTGTCCGATGCGGAACGGGAGGATCTTCTTCGGAAGATAGATTCGATTTGGGAAAAGAAGCACAAAAAGATGGTAGCACGCGCAGCCAACCCACTGCACCGCATGCGACAGATACTTGAAGAGTCGGACTCATCCGAAGACGAATCTGAACCGGACGCCGACCGTAAAATGTTCAATGCTTTTGTGGAAACAGAGGAATGCGTACTGCCTGgacaaattattaattatgaacGCTTCCAAAAAATTGCCGAGCAAGTCCAACACATGCACTTCCCAGTAGGTGAAATACCCTCGCCAGAAGTGGTTGAACGTCTGTACTGGTTGCGAGTGTTGCGCGGTGACGAACATGTGTGCGTACACAATGCTTCGTTAGATACCTCTGTGAATGGACTGGGTTTCCCACCTTACTATGATCACCCGTGGAATCTAAAGAGATTGGGCGGGTCTGACACGAACGTGCTTAGTGCGCTAGGACCGACACTTGCAGTCACTGTGCCAACACTACAACTGTCCATGATGTTTGCAACGAACTGCTGGCATAAAGACCCCCACCATCTGCCATGGACAGAATACATGCATGAAGGGGCTGCAAAAATTTgGTACGGCATTCCAGACCAAGCCAGCGCCATGTTCCGGGAGGTGGTACAAAAATTATGCCCAGGAGTAGCccaaaacaaatcaatatgGCTACCGTCAGACTTAACAATGATCCCGCCAGAGCTGTTAGTTCAGCACGGTATCCAATTGTCACGGCTGCAACAGAAGCCTGGGGACTACGTTCTTGTATTTCCTCGAGCTTATTCGTGTTCCATAAGTACAGGCACAGCGATATCCGAAAGCCTTTACTTTGCTTCTGAGATATGGCTCAGTCGGGTACAGCGCATATTCGAGGAAATGCGCAATAATTGCGAACCAGCCATGTTTTCCTTGGAGCAACTCGCTCTAGGATTGTGGCGAGGGAAAAACCCAACACGGGCCCGCGATTTGTTGATGCCAATATTGACAGCCGAGCGAGATCTTCGTAAGGAAGCACAAAGGCGAAAAGTTAAATCAGAATCAACATCTGAATTTCTCGCTCGTAACGGTCACATGAAAACGTCGGCGTGGCAGGTTAAACGCGATGAGTGCGAAGTGTGTCGCACAACGGTATACTTGTCGAAGGTTATAGGCGTTACTCCTGCAAGAACTTCCGTGTGTTTATCGCACGGATTAAAATTATACCGCAGAAGACGCACATCTAAGCTCgacaaaatatattgtaagcACTTGTTGCCTTACGACACGCTTTCCGATTCGGAACGGGAGGATCTTCTTCGGAAGATAGATTCAGTATGGGAGAAGAAGCACAGAAAGATGGTAGTACGCGCAGCCAACCCACTGCACCGCATGCGACGGTTGCTAGAAGAGTCAGACTTATCCGAAGACGAATGCGAACCGGACACCGACCGTAAAATGTGA
- Protein Sequence
- MVHKVTSHFIITMTNLSIPLALDQAYKYERDIVIRTHRKEPVVILERLLGYSEPQIINDNPVTLNVQMPNHIGNASIPVSRHPPRTPPVASSTPRQSGTNPPAYMHLRSRILTRLQSKPTKPKLTGSLIRKQHVTKKRTLCKRRRRRSSCTEDNVPLQNFVSHSRVLCNKKRPLSDNVSKNKDQSKPKYKKHAGQEQLLPSPSQINSVVNADNSEPSTSTHIQRPTISGMCTRSRSYLTEGNVAILPQQSSEPRENNVNNVTEDRGPIGAMAPPGVFEPTREPSEFDCSESVDLIGAPFRGWCNERMDTTEAALHRQSTVATPSVCTDIPLDDGSVCSLDITNGSADAWFDSYHNRKFKVPEPPRERRTHLSQSEKILRKYCPAWKYTSMGSISKIAPEIIERFCGGCSRCSIIKRVVNLAKHIPKATSDSGPAPNTPNTQQDTSTATVGTTEALDSSTQCQGVPEVLQTCSNVNDINVYDFNCEDEEVPSSAPTPYRTSRSNEPDNNSTPNQHLLDLFPKENYILKLKECGDEHNKHMAIEVVHRDNLDKTVPLSEVSEDNRLMLERFANSLKNVRSMLTEKNSVSEKNSPNNTQNIIERSKEHPLGINVMCEIPMYSDGANNASSMAAARPFLIPAPLRKPYIPFAGPSAPAIQPSKSVARPSAPATRASKSVARSSKSVARPSKSVARPSKSVARPSKSVARPSKSVARPPKSVARPSKSVARPSTPTTQPPTSAARPSAPAIQPPTSAARPPKSVARPSKSVARPSAPMTQPPTSAARPSAPAIQPPTSAARPSAPATQPPTSAARPSAPATQPPTSAARPSAPATQPPTSAARPSAPATQPPTSAARPSAPATQPPTSAARPSAPATQPPTSAARPSAPATQPPTSAAWPSAPATQPPTTAARLASLAARPSTLADWPITPEAQPSTSGAWPSTSAVAPSTSAAASSTSETRNGILDAPTFYPTAEEMSMNFIDYVQKIAPEATEYGICKITIPKELRPEFNMKNIQFKCNNQYISIMYQRWVNISRQMTAIKAHLGTQNVSFTRPPLFEGVEVDLVKLYHVVQSYGGLKAVIEQQKWPQVAEDMRLNSGRFKAHLKLDKIYCKHLLPYDTLSDAEREDLLRKIDSIWEKKHKKMVARAANPLHRMRQILEESDSSEDESEPDADRKMFNAFVETEECVLPGQIINYERFQKIAEQVQHMHFPVGEIPSPEVVERLYWLRVLRGDEHVCVHNASLDTSVNGLGFPPYYDHPWNLKRLGGSDTNVLSALGPTLAVTVPTLQLSMMFATNCWHKDPHHLPWTEYMHEGAAKIWYGIPDQASAMFREVVQKLCPGVAQNKSIWLPSDLTMIPPELLVQHGIQLSRLQQKPGDYVLVFPRAYSCSISTGTAISESLYFASEIWLSRVQRIFEEMRNNCEPAMFSLEQLALGLWRGKNPTRARDLLMPILTAERDLRKEAQRRKVKSESTSEFLARNGHMKTSAWQVKRDECEVCRTTVYLSKVIGVTPARTSVCLSHGLKLYRRRRTSKLDKIYCKHLLPYDTLSDSEREDLLRKIDSVWEKKHRKMVVRAANPLHRMRRLLEESDLSEDECEPDTDRKM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -