Tcom019434.2
Basic Information
- Insect
- Timandra comae
- Gene Symbol
- osa
- Assembly
- GCA_958496195.1
- Location
- OY292374.1:6556905-6571669[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-25 5.4e-22 78.6 0.0 2 89 276 360 275 360 0.94
Sequence Information
- Coding Sequence
- ATGCTACTCACGTGCCTGTGGAAAACGAAAGTGATCGGATGCGTCTCTCCGCCCTCGATTGATGATAGCACTCAGAACGTATCGATGCCTCCGCGAACGTCGTCGTCGTTGCCGGAGGGCAGCGGCGGTGCAgggcgcgcgggcgcgggcggcgcgccggGCGGGCAGCCGCCGGCCggccccgccgccgccgccggcccgCCGCCCGGCGCCATGGTCGCGCAGCCCTACGGACACCACGCCGCGTACAAGTCGCCGCACTACCCGCCCCAGCCCTACGCCTACCCGCCGAGGAACCACCATCCGTACCCCTACGGGTACCGGCCGCCCCCGCCACCGCATCCACCTCAACACTACGCGCCACCCATCAAGCAGCAGGGCCGGCATATGGGTCCTCCGGGGTCggtgggcgcgggcggcgcgggcgaggGCGCGATGCCGCCGCCCACGGCGCCGGGCGAGGCGCACGACAACgggcccgccgcgcccgccaccGCGCTCGTCACCACCGGGCCCGACGGCGCGCCGCTCGACGAGGGCAGCCAGCAGAGCACGCTCAGCAACGCCTCCGCAGCGTCCGGCGAGGACACGTGTCCGTCGGGCTCGGGGAAGGGCTCCCGCAAGGAGTACGGCAGCGCGGGCCCGTCGCCGTCGCCGGGCGGCGCGTCGCACTCGTCGCTGCACGACGACTACGACACCTCGCCCTCGCCCTGGCCCAGGCCCCCCTCTAGTCCTGTCTTTAACAGTCACATACCTCCGGAGTCCTACAGATCAAAGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGACGCGCCCGAGCGGCGCGGCTGGGTGGAGCGCCTGCTCGCCTTCATGGAGGACCGGCGCACGCCCATCGCCGCCTGCCCCACTATATCCAAGCAGCCGCTCGACCTCTACAGGCTGTACCTGCTCGTCAGGGACCGGGGAGGGTTTGTTGAGGTTACTAAGAACAAAACTTGGAAGGACATCGCAGGTTTATTAGGTATAGGAGCGTCGTCGTCGGCGGCGTACACACTACGTAAGCACTACACGAAGAACCTACTAGCGTATGAATGTCATTTTGATCGGGGTGGCATCGATCCGCAACCGATCATCAATCAAGTCGAGGCCTCCACTAAAAAGAAAAGTGGGAAATCGAACAATACGTCCAGTGCAGGGTCATCGAATTCACAAGAATCATTcccgggcggcggcggcgcggcgggcggcgcggccgcCATGGACGGGTACCCGGCGCAGTACGCGGGGTACCCGCCGCAGCCCAACCACTCGCAAGGCGCGGGCCCGGGCGGGGACAACCTCGCCGCCTCTAACCCCTTCGACGAGCCGCCGGGGCCCAGGAGACCCCCAGGTTACCAGCAAGGTTATGGATATGAATATGGATCTCCTTATCAATCGAATAGGCCCGTTTATCCCCAGTACGGACCCGACGGTGACAGAGGGTACCGCGGGTCGGAGTACCAGTACGGCGGGTACGGCGGCGGGTaccgggcgggcggcgcggggggcgcCACGCCGCCGCCCGGCGCGCAGCCCTACCCCGAGTACTACCGCGCGCCGCACCCGCCCCACCCGCACGCGCACCCGCCGCCGCACCCGCCGCACGCGCCGCACGCCCCACACGCCGCGCCGCACCCGCCCATCCCGCCCATACAGCCGCACCAGACGCATCAGCCCATCCAGCCGCCCATCGAgatgtcgGGCGGTTCGAGTGTCGGTAACCTAATGAGCTCGCAGCTGGCCCGGCAGCTGGTGGCGCCGCTGCCGCCCAACCCGAGACCCTACTACGGCGGCGGCAAGCCCGGCGCAGGCCCCCCGGGCGCGCCCGCCaacgcggcggcggcgggcggcgcgccgcGCCGACACCCCGACTTCGCCAAGGGCGAGGGCGCGTACTCGGGCCCGGGCGCGGCGCCGCCGGCGCGCTTCGGCGGCGCGTGGGGCGGCGCCTTCCCGCGCGCGCCGcagccgcccgcgcccgcgcagcCCTGGCGCCCGCCCGCGCAGCCCGCGCAGCCCGCCTGGACGCACCCGCCCTACCAGCCGCAGACGAGCGGGCCGGCGTGGGGCGGCGCGCCGCGGCCGCCGGCGCAGGACGGGTACCCCTCCGCGGCCACTCCCTCTGCCCAGGTGGGCGGGGGTGTGGGCGCGGGGGCGATGAAGCGCGAGCTGACGTTTCCCGCCGAGTGCGTGGAGGGCGCCGTGCCCGTGGGCGAGAAGCGGCGGCGCCTCACGCGGCAGGACGTCGCGCCCGTCGACGCCTGGAGGATCGTCATGGCGCTCAAGTCCGGCCTGCTCGCGGAGACATGCTGGGCCCTAGATATACTCAACATTCTTCTATTCGACGACAATTGTATAGGTTATTTTGGACTTCAACACATGCCTGGTCTCCTCGACCTCCTCCTGGAGCACTTCCAGCGAGCACTCTCTGACGTGTTCGAATCGTCGACGGGCGAGGAAGGCCCGTGGTACGCGCCGCCATCCCCGCCGAgcccggcgccggcgccgcggcGGCGCGCCGCGTGCGTGGAGTCCGGGCGCGCCGTGCGCGTGCTGCACGGGGAGAACTACACGCTGCAGTCGCGGCGTCGCCACCCCGTGACGCTGCGGGCCGACGACgagccgcccgcgcccgccgagCCCGACGAGCGCGAGCGCGACGACCGCGTGCTGGAGGCGTGGCAGTTCGCGGGCGACGCGCCGGCCGCCGAGCACGCCATCACGTGCGTGCGCACCGAGTTCCTGCACCTGCCCTTCGTGCGCGTGCTGCcgggcgcgcgcgcgccgtcgccgccgccgccgcccgccgcgccgccctcgccgccgccgcccgccgaccccgcgccgcccgcgcccgcgcccgacTCCGACAACCTCACGGCCGAGCCCATGGACCTGGAGCCGGAGCGCCGGCCGACGCTCCAGGTGCGCGACCCCGCCGGCGTGCTGCGGCGGCGGAAGCTCGACGACTACGAGGACGAGTGCTACACGCGCGACGAGCCCAGCCTGAACCTCGTGGACGAGACGCGCGACGCCCTCGCCCGCCGCTGCATAGCCCTCTCGAACATCCTCCGCGGGCTGACGTTCGTGCCCGGCAACGAGGCAGAGTTCTCGCGGTCCGGCGCGTTCCTGGCGCTCGCGGGCAAACTGTTACTCCTACACCACGAGCACGCGCCGCGAGCGGCCCGCGCGCGGGCGTACGAGCGCGCCGCGCGGGACGAGGCGGACGCGGCCGCGTGCTGCTCCAGCCTGCGCGGCGCCGCCGAGTGGTGGTGGGACACGCTGGCGGCGCTGCGCGAGGACGCGCTCGTCTGCTGCGCCAACATCGCCGGCGGCCTCGAGCTGCACCACCAGCCGGAGGCGGTGGCGCGGCCGCTGCTCGACGGGCTGCTCCACTGGGCGGTGTGCCCGGCGGCGGTGGCGGGCGACGCGCCgccggccgccgccgccggcagCCCGCTGTCCCCGCGGCGGCTGGCGCTGGAGGCCCTGTGCAAGCTGTGCGTGACGGACGCGAACGTGGACCTGGTGGTGGCGACGCCGCCGCGCTCGCGCATCGCGGCGCTGTGCGCGGGGCTGGCGCGCGACCTGTGCCGGCCCGAGCGGCCCGTGGTGCGCGAGTTCGCCGTCAACCTGCTGCACTACctggcgggcgcgggcggcggcgcggcgcgcgagGTGGCGGCGCACGCGCCCGCCGTGGCCGCGTTGGTGGCGTTCATCGAGCGCGCGGAGCACGCGGCGCTGGGCGTGGCCAACCAGCACGGCGTGGCGGCGCTGCGCGACAACCCGGACGCGATGGGCACGTCGCTGGACATGCTGCGGCGCGCGGCCGCCACGCTGCTGCGGCTGGCGGAGCGGCCCGAGAACCGCCCGCTGATCCGGCGCCACGAGCGGCGGCTGTTGTCGCTCGTCATGTCGCAGATCCTGGACCAGAAGGTGGCGCACGAGCTGGCCGACGTGCTGTTCCAGTGTACGCAGAGCGCGgacgcgccgccgcccgaccTCGAGTGA
- Protein Sequence
- MLLTCLWKTKVIGCVSPPSIDDSTQNVSMPPRTSSSLPEGSGGAGRAGAGGAPGGQPPAGPAAAAGPPPGAMVAQPYGHHAAYKSPHYPPQPYAYPPRNHHPYPYGYRPPPPPHPPQHYAPPIKQQGRHMGPPGSVGAGGAGEGAMPPPTAPGEAHDNGPAAPATALVTTGPDGAPLDEGSQQSTLSNASAASGEDTCPSGSGKGSRKEYGSAGPSPSPGGASHSSLHDDYDTSPSPWPRPPSSPVFNSHIPPESYRSKKSDSLGKLYEMDDAPERRGWVERLLAFMEDRRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKSGKSNNTSSAGSSNSQESFPGGGGAAGGAAAMDGYPAQYAGYPPQPNHSQGAGPGGDNLAASNPFDEPPGPRRPPGYQQGYGYEYGSPYQSNRPVYPQYGPDGDRGYRGSEYQYGGYGGGYRAGGAGGATPPPGAQPYPEYYRAPHPPHPHAHPPPHPPHAPHAPHAAPHPPIPPIQPHQTHQPIQPPIEMSGGSSVGNLMSSQLARQLVAPLPPNPRPYYGGGKPGAGPPGAPANAAAAGGAPRRHPDFAKGEGAYSGPGAAPPARFGGAWGGAFPRAPQPPAPAQPWRPPAQPAQPAWTHPPYQPQTSGPAWGGAPRPPAQDGYPSAATPSAQVGGGVGAGAMKRELTFPAECVEGAVPVGEKRRRLTRQDVAPVDAWRIVMALKSGLLAETCWALDILNILLFDDNCIGYFGLQHMPGLLDLLLEHFQRALSDVFESSTGEEGPWYAPPSPPSPAPAPRRRAACVESGRAVRVLHGENYTLQSRRRHPVTLRADDEPPAPAEPDERERDDRVLEAWQFAGDAPAAEHAITCVRTEFLHLPFVRVLPGARAPSPPPPPAAPPSPPPPADPAPPAPAPDSDNLTAEPMDLEPERRPTLQVRDPAGVLRRRKLDDYEDECYTRDEPSLNLVDETRDALARRCIALSNILRGLTFVPGNEAEFSRSGAFLALAGKLLLLHHEHAPRAARARAYERAARDEADAAACCSSLRGAAEWWWDTLAALREDALVCCANIAGGLELHHQPEAVARPLLDGLLHWAVCPAAVAGDAPPAAAAGSPLSPRRLALEALCKLCVTDANVDLVVATPPRSRIAALCAGLARDLCRPERPVVREFAVNLLHYLAGAGGGAAREVAAHAPAVAALVAFIERAEHAALGVANQHGVAALRDNPDAMGTSLDMLRRAAATLLRLAERPENRPLIRRHERRLLSLVMSQILDQKVAHELADVLFQCTQSADAPPPDLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00406490; iTF_00407348;
- 90% Identity
- -
- 80% Identity
- -