Tcom006428.1
Basic Information
- Insect
- Timandra comae
- Gene Symbol
- XBP1
- Assembly
- GCA_958496195.1
- Location
- OY292358.1:10686560-10688404[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2e-18 1e-14 54.9 11.9 2 64 42 104 42 105 0.95 2 2 4.3e-05 0.048 14.3 0.9 30 55 84 109 83 114 0.90
Sequence Information
- Coding Sequence
- atgagtGCTCCGATCATCATCACCGTGCCCAACAACTACCTGACGATGGAGGAGGATTCAAACGTCGTCCTCGACGTGGTCCCCACTCCATCCAGGAAGCGCAGGCTGGACCACTTGACATGGGAGGAGAAGATGCAAAGAAAGAAACTGAAGAATCGCGTGGCAGCGCAGACCTCACGAGACAGGAAGAAGGCCAAGATGGATGAGATGGAAAGCCGCATCAGCGGTTTGGAGGAAGTGAACAGGAAGCTTGTGAGCGAGGTGGAGAGCTTGAAGGCGTTGAACGAGCGTCTGTTGAGCGAGAACACGTCGCTGCGCAGCGAGGCGGCGGCGCGGACCGTCGCGGGAGCCCTAGGACCAGCAGAGTCACCTCAGCAGAAGGAAGGGCCCCCGCCGGCGATCCGCGCGGCGCGCCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACATCCTCGCACACCTCGAGTCCGAGGAGTACCTCGACACCCTCCATCAACTTGCAGACTCCCTCCTCAAAGAGATTGATGCAAGTGCTGCAGGAGCGACTCAAAATGAGCCAGTCCGGGTCACTAGAGAGTGCCCTAAAACAAATCAAGTGGTGGGGCCCGCAGCAGAGCAACTGGAATCCAGTGGAAGTCCTGTCGTAG
- Protein Sequence
- MSAPIIITVPNNYLTMEEDSNVVLDVVPTPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRISGLEEVNRKLVSEVESLKALNERLLSENTSLRSEAAARTVAGALGPAESPQQKEGPPPAIRAARLLLAMCLLSQTSSHTSSPRSTSTPSINLQTPSSKRLMQVLQERLKMSQSGSLESALKQIKWWGPQQSNWNPVEVLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01491609;
- 90% Identity
- -
- 80% Identity
- -