Telo088181.1
Basic Information
- Insect
- Tillus elongatus
- Gene Symbol
- -
- Assembly
- GCA_964006375.1
- Location
- OZ023270.1:92403179-92404969[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0041 0.75 12.7 1.1 1 23 124 147 124 147 0.97 2 15 0.002 0.37 13.7 3.7 1 23 167 190 167 190 0.98 3 15 0.019 3.5 10.6 3.8 1 23 197 220 197 220 0.94 4 15 0.78 1.4e+02 5.5 6.6 1 23 227 250 227 250 0.97 5 15 0.0098 1.8 11.5 0.8 1 23 257 280 257 280 0.97 6 15 0.025 4.6 10.2 2.3 1 23 286 309 286 309 0.97 7 15 0.019 3.5 10.6 0.4 3 23 317 338 315 338 0.96 8 15 0.0018 0.34 13.8 0.8 1 23 345 368 345 368 0.95 9 15 0.0021 0.38 13.6 1.1 1 23 375 398 375 398 0.97 10 15 2.2 4e+02 4.1 4.0 1 23 405 428 405 428 0.94 11 15 7.5 1.4e+03 2.4 4.6 2 23 436 458 435 458 0.91 12 15 1.5 2.8e+02 4.6 5.5 1 23 465 488 465 488 0.93 13 15 0.12 21 8.1 2.0 2 23 496 518 495 518 0.96 14 15 0.0091 1.7 11.6 2.9 1 23 524 547 524 547 0.95 15 15 0.082 15 8.6 4.8 1 23 554 577 554 577 0.97
Sequence Information
- Coding Sequence
- atgacagAACAGGCCGATCCTGCCTCTTTAGGCACACCCCACACAGATGGTGCTGTTTTTATTAAAATGGAGCATTTCACTACACAAGAAGCTGATAACTTCAGCGGTGATATTAATGAATCTAACTTTAcattaaacaatttttattatgGAAATGCTGTAGATGGTCATTATTATCAGAATAACATTGTACATTGTGAAGTGAATGAGAGCAACAGCGTCACTTCAGAATTTGAGCCCGAATTTCAAAACGACTTGCCTACgatgaaaaataaaatctacaagtGTCGAAAgtgtttttttaaagcaaaactgAAGCTAGACATAATCCGGCATTGTAGATTAAGGCATCGCCAAATCAACGATAAATTTATATGCGCATATTGTGGTTTTGCTACCAAATTCCGCGACAGACTAAGCAGGCATCTGATGACAAAGCATCAATATGGCGATCACAATAAATCAGATGGAGATGAGTATACGAGCAGAAGGGGTAAATTTAAATGTTCAAGATGCTGGTACGAGACATCCAGAAAATATGAACTGACAAAACATTTTCAAACCAGACACGGTGCCTTCCTTGAAACATTTAAATGTCACCTCTGCGTTTTTCAAAGTAAGGATCGTCACAACCTCAGGCGACATTTGGAAGCGATTCATTTGGAAACAACCGCCATATATCATTGTTCTCAGTGTACATATTTCACTGCTAGGAGACGAAACTTTCTGATGcattacaaaagaaaacacaatgaGATCCTCGATTTGTTCAGATGTTCCGATTGCAATTATGAGACTGAGCTGAGATATGACATGGAAAGGCACATAAGCAGAATGCACAAAAGCGAAGAAGTTTTCAGATGTATGGAATGCAAATACGAAACGAAAATCCAGTGGGAGCTTAGGAAACATTATAAAAGGACACACGATACAGGCAATCTGTTGGATTGTCCGTACTGTAGTTATCAAACACGGATTAGACTTAACCTGCAGGACCATATGAGCACTCAGCACCTTGATCCAGACAAAACCTTCGACTGTCCGTACTGTGACTTCAAGACCAAATACAAACCTAATGTTACAAAACACCTGAAAGCTGTACACGTCGAAACAGATATAAGATACAACTGCGAAAGCTGTagcttttctacgaaattagcgCAAAACTTGAGACGACATATCAAGACGATACACGAAGAAGCCGGTCAACTATTCAAATGTTCAGAGTGTCATTTTGAAGGCAAATCTACAAGCATTTTGAACAGACACTACAAATTTAATCACGATGAAACCTGCGAGTTGCTTAAATGTCCCGAGTGCACTTACGAAACTAAATGCAAATCAAAAATGAAGCGTCATTTCACAATCAAACACACTGATGAATCTATTATACACACGTGTTCGAAATGCGAATTCAAAACGAAATTCAAGTACAAACTGAAGGAGCATTTCGCTGTTAAACATGATGAAAATGCAGAGATTATCAAATGCATGTTGTGTGAGTATCAGACGAAAGATAGGAAGCAATACAATACACATTACAGATATATGCACGGAACGGTGCAGATGTTTCAGTGCTCCTACTGCGGGTATCAAAGTAAATATAGAAATAAGCTCAAAATACATGAGAAATTGAAACATGATGACGAGTGTGAGAGGTTTTATTGTACTTTGTGTGATTATTCGGCTAAACTCAATTATAAATTGACGCACCATTATAAATCGAAACATCCTGAggaactactactactacattcTGAGGCAAATGCAAATGAAGAATGTCAGACTTGA
- Protein Sequence
- MTEQADPASLGTPHTDGAVFIKMEHFTTQEADNFSGDINESNFTLNNFYYGNAVDGHYYQNNIVHCEVNESNSVTSEFEPEFQNDLPTMKNKIYKCRKCFFKAKLKLDIIRHCRLRHRQINDKFICAYCGFATKFRDRLSRHLMTKHQYGDHNKSDGDEYTSRRGKFKCSRCWYETSRKYELTKHFQTRHGAFLETFKCHLCVFQSKDRHNLRRHLEAIHLETTAIYHCSQCTYFTARRRNFLMHYKRKHNEILDLFRCSDCNYETELRYDMERHISRMHKSEEVFRCMECKYETKIQWELRKHYKRTHDTGNLLDCPYCSYQTRIRLNLQDHMSTQHLDPDKTFDCPYCDFKTKYKPNVTKHLKAVHVETDIRYNCESCSFSTKLAQNLRRHIKTIHEEAGQLFKCSECHFEGKSTSILNRHYKFNHDETCELLKCPECTYETKCKSKMKRHFTIKHTDESIIHTCSKCEFKTKFKYKLKEHFAVKHDENAEIIKCMLCEYQTKDRKQYNTHYRYMHGTVQMFQCSYCGYQSKYRNKLKIHEKLKHDDECERFYCTLCDYSAKLNYKLTHHYKSKHPEELLLLHSEANANEECQT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -