Telo045030.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tillus elongatus
Gene Symbol
ush
Assembly
GCA_964006375.1
Location
OZ023265.1:107472417-107480190[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.0094 1.7 11.6 0.1 1 20 147 166 147 168 0.92
2 8 0.00021 0.039 16.7 1.5 1 23 213 235 213 235 0.99
3 8 0.013 2.4 11.1 0.7 3 20 263 280 262 282 0.93
4 8 0.097 18 8.4 2.7 2 21 568 587 567 588 0.93
5 8 0.0084 1.5 11.7 0.0 3 20 627 644 625 646 0.91
6 8 0.035 6.5 9.7 0.3 2 23 683 704 682 704 0.96
7 8 0.014 2.6 11.0 1.3 1 23 710 732 710 732 0.99
8 8 0.13 23 8.0 1.0 2 21 894 913 893 914 0.93

Sequence Information

Coding Sequence
ATGATGTTTTTACTACTCTACCACAGCTTTGTTTTTGAGAGGGATGAGGAATGGACGAACAATGCTTCAGAATCAACGGAAACCGCTGTTGCCAAGTTGTCGCCGAAAAGAAGCAAAACACCCGAAGAAGCAACTGATAAGAGTCTCAAAAATGATCATAAAAGTGAAAATGATGACGCTTCACCACCTCGAATAAGGTTAAAAGCTAATTTGGCAACTGATCCTGCCTTACACCCACCACCTCTCAACTCATGTACTATAAAAAATGAATTAGAAACAAGTCAATCTCCTAGTGAATATTTAGCAGCTTTACAGCCTGCCATACAATCGGCACTAGCTTCACGCGGATTCTTTTTACCTTCCGCAGTGGATGTTGCGGACGCTTCAATAAGAACTGCCGAAACGCCTGAAATAGCTAGACAACCGACAGTACCACTTTTTATTTGTTCACCTTGTGGAATAAGATTTTCATCCTTAAGCACTTTAGAAGCTCACCAAACATACTACTGCTCCCACAGAACTAACAAGCCAATCAACGACGACGATACCAAATCTCTCAGCGGTGCTGAACCAAGCGGAAGTCAGTCTGATCAAGACCCAGAGCCTTCCACCAAGAATCTCCGAACTGGCAAACAGTATACCTGTACACAGTGTTCTTATAGTGCCGATAAGAAAGTAAGTCTAAACAGGCATATGAGAATGCATACCGTTTCCCCTAGTCCAACGAATGTTACGGCAGTTATTGCAAATGGAGAACCGGTCACCAATGATAGTCAAGACCGATACTGTGCTGAATGTGACATAAGATTTAGTACACAAAAAACATATCGAGCTCACAAACTGCACTATTGCAATTCAAGACATATGGTGAAGTCTAGTAACAATTCAACTACAATAGCCCCAAAAGCAGCTTCAAGTTGTACGTCTGGATCATCACCGACCTCGCCAATAGATGTATCAGCATGTCGGACACCACCTTCTCCAGCTGGTCCGCTTCCCCAGCAACCGTTTCTAGCTTTGCCCACCAATCCTATCATCATCGTGCCATACTCTCTATTCAGAAGTGCAAGTGTTCTTCCTGGTATACTACCTTCTGTCTCTGGTCTTCCAAATCCAGATACTCCCTGTTTTCTCCTTCCAAATGGTCAACTACAGCCCATGACGCAAGCTATTAATCACACCACGGCTCTGCAACCACCAGAAGTATTAAAGGCTGCAAATAAACCTAAAGATACCTCACTGGTGAGAGAATCTTCTTCAGCTCCTTTAGATTTAAGCGTTAGAAAATCGCCAGAAATTAAGTCAAGGGATTGTGATGaacaagaaaaagaaaattttaaacagAACAGATCTCCGACCCCAGAAAGAATTGAATGTGTGCCATCCATACGAGGGTCGCCTCCATCTACTCCTTCTCAGCCAATAGTATCACCATCTTTAAGCGTATCGCCAAAACGAAAACACGATGAATCGTCTAGAAGCAGCAGCCCAAAATTCTCCCGTTCTACGCCAAAAACTGCGGGTGGGGTAGAAAGATCTAGAACCAGTCCAGATACTAATAGCAACCCGTTTGAGATCCCATCATCTCTTCATCCTTTATTAATGAGAGCATCTCTGTTTCCCGAAGTACAAATGAGATTGGCAGAACTTCCAACAATGCCCCCTGCAGTTCCACAAGTTCTGGTTAAACAAGGTGTATCAAAATGTAAAGAATGTAACATTGTTTTTTGCAAACTAGAAAATTACGTTATTCACAAAAAACATTATTGTTCAGCGAGATCACAAGAAGATGATATTTCGAGGACATCAGGAAGTCCACCTATCAGTCCCAAAAGTACCGGTACGACTAGTCCAGCTGCTCAGTACCAGCAACTTATCTGTTTAGCGTGTGGTATTAAATTCACGTCGTTAGACAATTTAAACGCTCATCAGGCTTATTATTGTCTAAAAAGGAGTGAGATTGACTTAAGGAGGTGCAGCAAATGTCGAGGTGTCGCGGAACCAGGTCATCAATGTATGCCACCAACAGCATCTTTAGCTGGATGGAAATGTCCTTGTTGTGACATGGTGAGTCCAACTGCTAGCTCTGCCCAGAGACATATGGAAACCCACACTGGTGTCAAAGCTTATCGTTGTACCATCTGCCGATATAAAGGAAACACCTTGAGAGGAATGAGAACTCATATTAGGATGCATTTTGAAAAGAGGTCACCAGATTTACAAGAAGAGAAATATATATCCTATATCCTCGAAGATGACGGCACCAACATAATGGAAGTAAGTGTGGCACCAGCAGGAGTTGCTACCAGTGTTATCGATGAGAGGGTGGCATCACCAAATCCAGAAACCCGCGTAGAGCCCCTTCACTGTTGCCGGCATTGCTCTTACAACTCTCCTTACAAGGCTAATGTACACAGACATGAGAAACTAGTTCATGACATACAAGGAAACGAAGACGCAACAGTCAATGGTACTGGTGAAAACTCTAGATCCTTACCAAATTTGGAGGATGACGAAGAGCTGATTATCAAAAAGGAAGCTATAGAACCTGAAGTAATAATAGCTTCAGCTGGAGAAAGTCTGAAAAAGGAAATTTTAGACAGTCCAGTGGACGCTAGTATGAAAGCTATTGACCGGGATGAGGAACTTCTCCAAGAAGCTTCAAAGCCCGGCCCAAAATATTGCAAATCGTGTGACATCTCATTTAACTACTACTCTACATTTGTTGCACATAAAAAATTTTATTGTTCGAGTCATGCAGGCGAAATCACGACTGCTTCTAACAATAACAACAACCCCCCAAGTCGAGCTGCCGAAGCGTCGGTACTCTAG
Protein Sequence
MMFLLLYHSFVFERDEEWTNNASESTETAVAKLSPKRSKTPEEATDKSLKNDHKSENDDASPPRIRLKANLATDPALHPPPLNSCTIKNELETSQSPSEYLAALQPAIQSALASRGFFLPSAVDVADASIRTAETPEIARQPTVPLFICSPCGIRFSSLSTLEAHQTYYCSHRTNKPINDDDTKSLSGAEPSGSQSDQDPEPSTKNLRTGKQYTCTQCSYSADKKVSLNRHMRMHTVSPSPTNVTAVIANGEPVTNDSQDRYCAECDIRFSTQKTYRAHKLHYCNSRHMVKSSNNSTTIAPKAASSCTSGSSPTSPIDVSACRTPPSPAGPLPQQPFLALPTNPIIIVPYSLFRSASVLPGILPSVSGLPNPDTPCFLLPNGQLQPMTQAINHTTALQPPEVLKAANKPKDTSLVRESSSAPLDLSVRKSPEIKSRDCDEQEKENFKQNRSPTPERIECVPSIRGSPPSTPSQPIVSPSLSVSPKRKHDESSRSSSPKFSRSTPKTAGGVERSRTSPDTNSNPFEIPSSLHPLLMRASLFPEVQMRLAELPTMPPAVPQVLVKQGVSKCKECNIVFCKLENYVIHKKHYCSARSQEDDISRTSGSPPISPKSTGTTSPAAQYQQLICLACGIKFTSLDNLNAHQAYYCLKRSEIDLRRCSKCRGVAEPGHQCMPPTASLAGWKCPCCDMVSPTASSAQRHMETHTGVKAYRCTICRYKGNTLRGMRTHIRMHFEKRSPDLQEEKYISYILEDDGTNIMEVSVAPAGVATSVIDERVASPNPETRVEPLHCCRHCSYNSPYKANVHRHEKLVHDIQGNEDATVNGTGENSRSLPNLEDDEELIIKKEAIEPEVIIASAGESLKKEILDSPVDASMKAIDRDEELLQEASKPGPKYCKSCDISFNYYSTFVAHKKFYCSSHAGEITTASNNNNNPPSRAAEASVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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