Telo087738.1
Basic Information
- Insect
- Tillus elongatus
- Gene Symbol
- -
- Assembly
- GCA_964006375.1
- Location
- OZ023270.1:82391279-82417636[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0014 0.27 14.1 0.7 1 23 394 417 394 417 0.96 2 15 3.2 5.8e+02 3.6 0.9 1 23 455 477 455 477 0.95 3 15 3.7 6.9e+02 3.4 0.7 2 23 516 539 515 539 0.92 4 15 0.0012 0.21 14.4 4.6 1 23 542 565 542 565 0.96 5 15 0.063 12 9.0 2.8 2 23 572 594 571 594 0.95 6 15 9.7e-05 0.018 17.8 3.5 1 21 707 727 707 728 0.95 7 15 0.0028 0.52 13.2 1.4 2 23 740 762 739 762 0.91 8 15 0.13 25 7.9 0.4 1 23 765 788 765 788 0.95 9 15 0.041 7.5 9.5 0.1 2 23 794 815 793 815 0.95 10 15 8.1 1.5e+03 2.3 0.2 1 23 819 842 819 842 0.94 11 15 0.11 21 8.2 0.4 2 23 849 871 848 871 0.95 12 15 0.087 16 8.5 0.5 2 23 880 902 879 902 0.94 13 15 0.1 19 8.3 0.2 3 23 909 930 908 930 0.95 14 15 6.8 1.2e+03 2.6 0.1 2 23 1148 1170 1147 1170 0.87 15 15 0.46 85 6.2 0.9 1 23 1183 1205 1183 1205 0.96
Sequence Information
- Coding Sequence
- ATGGAAACTAAGTTGTGTAGAATATGTGGAAAGTTAGGGCAAAGTTACGTGTATCTATTCAGAACAGAAGGTCTGAAAAACAAAGTGGAAACTTGTCTACCCATTGTAGTTTCTCCTCACAGTTTGTTACCGGATACAATATGTGGAGAATGTTACGAGCACATAGACAGTTTCTACAGTTTCATCAAAAACTGTCTTCAGAACATTATAATTTTAGAAGCACAGTACGACATAACCGAATCATGCTTGAAAACAAAAAGGAAACAAGAAAAAGGCTGTCTAGCCGATATAGCCATGCTAAAACACAACAAGTCCATACAAACAGATGATTATTTAGATGTTTTACTCCAGCAGGTTAATGAAAATGATATTAATAACGGTTTGGAACCACTTTTATGTGACAATCAAAAGCTGTCTAATTTAAAAAGAAAGTTACTTGTCGATTATGATGTTGAATCTGACAGTTCAGAAATTGAAGATAATTCATATAACAACACAGGAAAAGTGATAATAAATAGTAATAATGTATTGAACAATCGCATTGATGATCTCGTTAGTATTTTCTTGACGCCAAAAAACAATTTAGCACTAAGCAAACAGTATTTTGATGATGCTGAAAATAATCTCATTGATGAAATAGCTCAACGAAAATCTTTGAAAAGAAAAAGTAAATTGTGTATTGAGAGTTCTAAACCGAAAATCTTCAAACTTGATACATCGAATAGAAGGAAGTGTAAGCAACCTAAAAAAGTTGAAAGCAAACAAATTGCTGTGGAACATGAGGTAGACAACACTCTTGATTTTGTTGCTCTTGAAAAGATGTATGAACAGTTGGATAATAGGATAGAGGATGTGAATCCAGCTGACAGTGAGAGAAGGATCGTTGATGAAAAGCCACCAGAACTTGAAAAGGAAGTCGACCCGTCCACCCTACTTCCACAAACCTGCTTATTATGCTCAAATCAGTTCCTAGGACCATCTGCAATGGCAGCACATGTTTTTGAGATGCACGGTATAGATATGGCCCAGATTCTTTCATCTCTTGAAGCACAGAATGACAAAAAGAAGAAACTTCCCAACCTAGTTAAGATATCCGATTTGAAACGCAGTGATTCTTTCGaAGACAATCAAGATGCAGAAGCAACTCAAAGTGAGGATTCACCAGCTTTAGCTGCCCCACACATGTGTACCCTCTGTCCAGCAGTATTCACAAGCTCTCCAGATTTATATACCCATTTGCGATTGAAACATCCAGAGCAAGCTTCTTTAACCTGCGGACTGTGCCTCTGCCAAGCATCATCATACATAACCTTAAAATCTCATCTTGACATTTGCACTCAAGAGCATCCAGTTACCACTAGATACTTCTGTCAGATATGCAAGTACGGTGAAGACAGCTCGAAAATGTTGGAGCATCATGTCCTGGTTCACAGCTTTCTATTGGAGGCATGCAAGAAACAGAACAAGATATTTGACCCAGATGATTATATTGAAACTAACGACCTTTACGATGTATCATGTGGATCACCAAATTTGAAGAGTCTGAGTTGTAGTGATTGCGGATTGAACGATTTTGATTCATTTAAAGACTTTAGCGCCCACCGTAGGAGCAAACATTCCATTTTTCACTGtgatttgtgtaataaattttaTGGACGAAACTCGCATCTATGGAAACACGTCAACAGATTGCACAAGGGCCATCCAAGCATCACCTGCCAGCTCTGCTATAAAACTAGTGCTTCAAAGTATCACCTTTCTCAGCATTTCAATAAAATACACAGCACTAAACCTTGTAAGACAAAACATAACGAACTTCAGCTTGGCAACGACAATTCCGAAGACTTCATGTCACAGAAGTTCCAGGCTTTCGATTTCCAGTCTGTAAAGCAGAGTTTCATGAGACAAGAGTTGCTAGAACAAGGAAAGAAAGCTTTAAGTGAGGAGCCTGATGATAATTCAAACCAGCTTTCCGGAGATGAGAGTCCTGAAGAAAAGACTGCAgtgagcatgcctacatttgtagaACCTCCGTACGCCCCCAAAGAAATCGATGCTTCAAGTGATCTCTACACCAATATCATTACGAATTACACTCCTCCAGTAAACGAAGGTGAATTCAAATGTCCGAAATGCGGCAAGGGCTTCCATAAGAAATCACTTTTgaaaaagcacaagaaaaattgtaGACCAAGACTGCAAAAAGATCTGCTGACACGATGCAAGTCTTGCCAAAGGGTATTCAAAGATCGCCAGTCTTTGGCGAAACACCTTGTCAATTATCATTCTGAATATGCTTGTGAAATTTGCGGGCAGAAGGTACAGAGTAAGTGTGAAATCGTGGCACACATTCGTTTCACACATCCTACATGCCATCTAATTTGCAACATATGTGGAAACATTCTCAGAAGCAGAGCTGATTTGAACGACCACAAGAAAGATCATGTAAACTCATACATTTGCCAGTTTTGCGCCGACTCGCTACCTTCCAAAATTAAACTTAAGATGCACATATTGAGTTTACATCGTAAGATTTTGTCATTGAGTTGCGGGATTTGCCTGAAACTCTTTGAAACGCAACATGTCTTACGTGATCATGTTAGATTGGTTCACAAAGATCAGTTGACACCGCTGACGTCATGTCCCGTTTGTGGAAAAAACTACGGTTCAAAATGGAAAACTTACGATCACTTGAACAAATCTCATGGTAGGATTTTTAAGGCTTGTAAAACATGTTTGGAGGTATTTAATACAGATAATGAGTTACAAACGCATTATGAGGTCATGCATGGTGGTCAAAATGTAAACATCAAGTCTACACCATCTGCTTTAAGTAATTCAATAAAATGTACAGTAAAGGAATctcaaaataataataagagtTACCAAAGTGAATCTGAACAAGAAGACGAAGACAATAGCGAACAAAGTAATGATGTTGATAATTACAATTCTAATCCAGAGAAGCAGAGTGATGTTGAAGACCAAAGAAGTAACGAATATGTCAATTTCCCTGAATTATCAGCAGCAAAATCGAAAATATCTCTCTTAGAAAAAAGACTGCTTGGTAAGAAACTCACAGAAGAAGATACCAAATATGCTAACGCtgatcaaaataaaataacaatttctAGTAGCGACACAACTAATAATAAGCACACGATCTCAAATAACAAAAATCCAGAAAGTAAGAAGcaagaaaacaaaattatcaaaGCCAATAACACTAACACAAATATCCAGAACATTAAACAAGAACCTGAAGAATGTAATGAAGCTGCAATAAACAATAGTTCAAATCCACAGCATAATAGTTCAAAACGCACTGTTTACGTAAATAGTAATGACCCATCATTAtgtgaaatttgttttaaaacatgGCCAGCCAAAAAGCATTTATGGCAACACTACATTCGATGTCATAAAAGTGTTGCTGCCACTGTATGCGGCATCTGTTTAAAAACGAATCCTGATTATGCAACCTTACAAAAGCATTTAGTGGAAACCCATCCGAATCTACTCCACGGTCAAGGTTTTGGCTCCAATTTCATTTGTAGAATATGTGGTCGGTATCACAATGCGAGCTCCAAACTTAAATTGCACATGGCAATACATGAGAAATACGAATGGTCGTTCCTTGAAGAGAATATGATCAAACCTGAAGTAAAGACTGAAGAACCAAATGAATCTTCAGTTAATCAGTACATATTCAAAAAAGACGACCAAGCTGAAAACGATAATTTCAGTATAAATTATGAAAGTATGATAGAACAGGTGGAGTGTTCAGAATCAGACAATGAAGAGAGCAACATGGCCGATCCTCAGAACCAATCTTCATCTGAAATCGAAGAACAAGACGATGAGGAAGACGAAGATGAGCAAGAAGATGGTGAGGAAGATGAAAGCGATAATGAATCTTGCATTTCAGAACCGTCGTTAGAAAGGCGTATGCTCAACAATATGCTAAGAGAAAAACAGCATCTTTTGATCAAAAATGCATCAGAAACGAATCAAAATTCCGAAAGTTCAGACAGTGACGATTCGTCTAATTCAAGTTCAGATGATGTGTCTCGTGATTCCAGTTCTTCGCAAAATAAATCAGATTCGTCAGTGGAAGCAACAGAAAATACAGGTAGCAATATGTTTATGTGTAAACCAGACGAACTGGACTCTGCCATAAAGTCTATAAGTTATGTCAATAACGTGAACGAAATCGATGACGATATTGATGATGATTTTTGTGAAATGCAGCAACAGAATTTGAATGAAAACGAGTTAGAATCAGCCGTTGGGAGTATACTGTAA
- Protein Sequence
- METKLCRICGKLGQSYVYLFRTEGLKNKVETCLPIVVSPHSLLPDTICGECYEHIDSFYSFIKNCLQNIIILEAQYDITESCLKTKRKQEKGCLADIAMLKHNKSIQTDDYLDVLLQQVNENDINNGLEPLLCDNQKLSNLKRKLLVDYDVESDSSEIEDNSYNNTGKVIINSNNVLNNRIDDLVSIFLTPKNNLALSKQYFDDAENNLIDEIAQRKSLKRKSKLCIESSKPKIFKLDTSNRRKCKQPKKVESKQIAVEHEVDNTLDFVALEKMYEQLDNRIEDVNPADSERRIVDEKPPELEKEVDPSTLLPQTCLLCSNQFLGPSAMAAHVFEMHGIDMAQILSSLEAQNDKKKKLPNLVKISDLKRSDSFEDNQDAEATQSEDSPALAAPHMCTLCPAVFTSSPDLYTHLRLKHPEQASLTCGLCLCQASSYITLKSHLDICTQEHPVTTRYFCQICKYGEDSSKMLEHHVLVHSFLLEACKKQNKIFDPDDYIETNDLYDVSCGSPNLKSLSCSDCGLNDFDSFKDFSAHRRSKHSIFHCDLCNKFYGRNSHLWKHVNRLHKGHPSITCQLCYKTSASKYHLSQHFNKIHSTKPCKTKHNELQLGNDNSEDFMSQKFQAFDFQSVKQSFMRQELLEQGKKALSEEPDDNSNQLSGDESPEEKTAVSMPTFVEPPYAPKEIDASSDLYTNIITNYTPPVNEGEFKCPKCGKGFHKKSLLKKHKKNCRPRLQKDLLTRCKSCQRVFKDRQSLAKHLVNYHSEYACEICGQKVQSKCEIVAHIRFTHPTCHLICNICGNILRSRADLNDHKKDHVNSYICQFCADSLPSKIKLKMHILSLHRKILSLSCGICLKLFETQHVLRDHVRLVHKDQLTPLTSCPVCGKNYGSKWKTYDHLNKSHGRIFKACKTCLEVFNTDNELQTHYEVMHGGQNVNIKSTPSALSNSIKCTVKESQNNNKSYQSESEQEDEDNSEQSNDVDNYNSNPEKQSDVEDQRSNEYVNFPELSAAKSKISLLEKRLLGKKLTEEDTKYANADQNKITISSSDTTNNKHTISNNKNPESKKQENKIIKANNTNTNIQNIKQEPEECNEAAINNSSNPQHNSSKRTVYVNSNDPSLCEICFKTWPAKKHLWQHYIRCHKSVAATVCGICLKTNPDYATLQKHLVETHPNLLHGQGFGSNFICRICGRYHNASSKLKLHMAIHEKYEWSFLEENMIKPEVKTEEPNESSVNQYIFKKDDQAENDNFSINYESMIEQVECSESDNEESNMADPQNQSSSEIEEQDDEEDEDEQEDGEEDESDNESCISEPSLERRMLNNMLREKQHLLIKNASETNQNSESSDSDDSSNSSSDDVSRDSSSSQNKSDSSVEATENTGSNMFMCKPDELDSAIKSISYVNNVNEIDDDIDDDFCEMQQQNLNENELESAVGSIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -