Telo081679.1
Basic Information
- Insect
- Tillus elongatus
- Gene Symbol
- -
- Assembly
- GCA_964006375.1
- Location
- OZ023269.1:124366433-124369999[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.12 22 8.0 2.2 1 23 659 682 659 682 0.96 2 17 0.079 15 8.6 1.1 1 23 690 713 690 713 0.95 3 17 0.16 30 7.7 6.0 1 23 721 744 721 744 0.96 4 17 0.02 3.6 10.5 2.2 1 23 752 775 752 775 0.97 5 17 3 5.4e+02 3.7 0.2 1 20 783 802 783 803 0.91 6 17 0.39 72 6.5 0.3 1 23 814 837 814 837 0.96 7 17 0.00029 0.054 16.3 1.6 1 23 845 868 845 868 0.97 8 17 0.075 14 8.7 0.2 1 23 876 899 876 899 0.97 9 17 0.0049 0.9 12.5 2.0 1 23 907 930 907 930 0.94 10 17 0.0092 1.7 11.6 1.2 1 23 938 961 938 961 0.96 11 17 0.57 1e+02 6.0 0.4 1 23 969 992 969 992 0.96 12 17 0.0079 1.5 11.8 1.3 1 23 1000 1023 1000 1023 0.96 13 17 0.43 79 6.3 1.9 1 23 1031 1054 1031 1054 0.97 14 17 0.025 4.7 10.2 1.0 1 23 1062 1085 1062 1085 0.97 15 17 0.017 3.1 10.8 2.4 1 23 1093 1116 1093 1116 0.96 16 17 0.058 11 9.1 2.2 1 23 1124 1146 1124 1146 0.98 17 17 0.071 13 8.8 0.4 1 23 1155 1178 1155 1178 0.94
Sequence Information
- Coding Sequence
- ATGGATGCCAGTAGCAGTAGCAATGTAAAATTGAAGTTAGAATGCAATGAAGAGGTGAAAACAGAGGAAGATTACAAAATAGCAGAAGCACAATCTGATTTGACTGCACCTGTGAATATAAAAAAGGAACACTGTGATTGCAAAATAGAAATAACAGAATGTGATTTGACTGCATTTCTGAATGTAAAAAAGGAATACTGTAGCGATGACGACGAAACTAGTTTAAATATAGATGTTTGTGAACAGTTGGATAGTAATGTAAAAACAGAGGAAGATTGCAAAATAGCAAAAGCAAAATGTGATTCGACTGCACTTGTGAATATAAAAAAGGAATACAGTAGTGATGACGACAGTTTGTCAAATAATTATTGCCAAACTAGTTTAAATATAGATGTTTGTGAACAGTTGGATAGTAATGTAAAAACAGAAGAGGATTGCAAAATAGACATAGTAGAATGTGATTTGACTGCACTTGTGAATATAAAAAAGGAATACAGTAGTGATGACGACAGTTTGTCAAATAATTATTGCCAAACTAGTTTAAATATAGATGTTTGTGAACAGTTGGATAGTAATGTAAAAACAGAGGAAGATTGCAAAATAGCAAAAGCAAAATGTGATTCGACTGCACTTGTGAATATAAAAAAGGAATACAGTAGTGATGACGACAgtttgtcaaataatttttgcCAAACTAGTTTAAATATAGATGTTTGTGAACAGTTGGATAGTAATGTAAAAACAGAGGAAGATTGCACAATAGCAAAAGCACAATGTGATTCGACTGCACTTGTGAATATAAAAAAGGAATACAGTAGTGATGACGACAGTTTGTCAAATAATTATTGCCAAACTAGTTTAAATATAGATGTTTGTGAACAGTTGGATAGTAATGTAAAAACAGAGGAAGATTGCACAATAGCAAAAGCAAAATGTGATTCGACTGCACTTGTGAATATAAAAAAGGAATACAGTAGTGATGACGACAGTTTGTCAAATAATTATTGCCAAACTAGTTTAAATATAGATGTTTGTGAAAAGTTGGATAGTAATGTAAAAACAGAGGAAGATTGCACAATAGCAAAAGCACAATGTGATTCGACTGCACTTGTGAATATAAAAAAGGAATACTGTAGTGATGACGACAGTTTGTCAAATAATTATTGCCAAACTAGTTTAAATATAGATGTTTGTGAACAGTTGGATAGTAATGTAAAAACAGAAGAGGATTGCACAATAGCAAAAGCACAATGTGATTCGACTGCACTTGTGAATATAAAAAAGGAATACTGTAGTGATGACGACACTTCGTTAAATAATTATTGCCAAACTAGTTTAAATATAGATGTTTGTGAAAAGTTGGATAGTAATGTAAAAACAGAGGAAGATTGCACAATAGCAAAAGCAAAATGTGATTCGACTGCACTTGTGAATATAAAAAAGGAGTGTGATGATGACAGTTTGGTAAATAATCATTGCCAAACTAGTTTAAATATAGATGTTTGTGAACAGTTGGATAGTAATGTAAAAATGGAGGAAGATTGCAAAATAGCAAAAGCAAAATGTGATTCGACTGCACTTGTGAATATAAAAAAGGAGTGTGATGATGACAGTTTGGTAAATAATCATTGCCAAACTAGTTTAAATATGGATGTTTGTGAACAGTTGGATAGTAATGTAAAAACAGAAGAGGATTGCAAAATAGACATAGTAGAATGTGATTTGACTGCACTTGTGAATGTAAAAGAGGAATGCTGTAGTGATGCCAACAGTTTGGGCAATAATGATTGCAAAACtcttttaaatataaatgtttgtgaaCAGCTAGATGGTAAAAACTTCTCAAGAAACGCTGTTTCCAAAAGCAGTCGAAGGGGAAATTTCAAATGTATCATCTGTGATTACACCAGTGCATGGAAACAAAGTGTCGTAAGACACGTCAACACGAAACATACAAAtagtgaagaaaaatgttttaaatgcgcTTTGTGTGACCACACTAATAAACAGAAATGGCAGCTGTCAAGACACATTATTAACAAACACCGAAAAATTGAAGAACGGCCATATAAATGTAAGTTGTGTTCTTACACTACTGTATGGAAAGcgaatctgtcaaaacacatcaccAACAATCACAGAAGTATCGACGAGACACCTTTTAAATGCCACTTGTGTCATTATACTACTGTATTGAAATCGAAGCTGTCAACACACATCTTCTCTAATCATAGaattattaaaaagaaaaacttCAAATGCGAGTCGTGTAATTACATTTGTGCATACAAAGTCAGTCTGTCCAAACACATAATATCCAAACAcacaagtgttaaaaaaaagtcTTATAAATGTCAGTTTTGTAACTACGTTAGTGCATGGAAAAAAGATCTGTCAGAACATATTATCTGCAAACATAAAAGTATTAGGGAAAGACCTTACAAATGTGacttgtgtgattacgctagtttACGAAAAAGGCGTCTGTCAGCACACATCATCTCCATGCACAATAGTATTCAACTCACACCTTATAAATGTGAGTTATGCGATTACACTACTGTACATAAGGAGAATCTGTTAACACACATAGTAACCAAACACGGAAGTAGTgaagaaaagccttttaaatgtgatctgTGTGACTTTACTAGTGTAGAGGAAATCagtctgtcaaaacacatcatctccagcCATAGAAAGATGAAAGAAAAACGGTTTAAATGTAATCTATGTAATCATGCTACTGTACAGAAGGGACAGCTGTCAAAACACATTATCTTCAAACACGGATCATTTGAacaaagaccttttaaatgtacaATGTGTAAATATGGTACTGTAGTGAGGGcgcatctgtcaagacacatcatggCAAGACACAGAAGTATGGAAGAAAGACCGTTTAAATGTGAGTTTTGTTCTTACGCAGCTGTAAAGAAGGATAGTGTGTCATCACATATCATTTCCAAACATAAAGGTATACaagacagaccttttaaatgtgaactgtgtaaTTATACTAGTGTACAGAAAAGAAATATGTCAAATCACATAATTaacaaacacaaaagtattgaagcaaggccttttaaatgcgatttgtgtgattacagtactgtaTGGAAAACTTGTCTATCAGACCACATCAAGATCAAGCACCGCAGTTATGAAGAGAAACCATACAAATGTGAATTTTGTAATTACGCTACTGCACTGAAGAAGTATTTGTCAAATCACATCATTTCCAAACACAGAAGAATTGAAGACAGACCTTATAAATGTAAATTGTGTGATTTCGCTACTGTACAGAAGGGGCATATGTCAATACACATGTTttccaaacacaaaagtattgaagAGAGGCGTTTCAAATGTAAAATGTGTAGTTTTACTAGTTTACGGAAATATGAACTGTCGAGACACATCATTTCCCATCAAGGAGTTATTCAAGAAGGCCCCTTTATATGTGACTTGTGTGGTTACAATACTGTAGAGAAACAGGATCTATCAAGACACTTCATCTCCAAGCACAGAAGTATTGAACATTATTCTTTGTTCTCTTAG
- Protein Sequence
- MDASSSSNVKLKLECNEEVKTEEDYKIAEAQSDLTAPVNIKKEHCDCKIEITECDLTAFLNVKKEYCSDDDETSLNIDVCEQLDSNVKTEEDCKIAKAKCDSTALVNIKKEYSSDDDSLSNNYCQTSLNIDVCEQLDSNVKTEEDCKIDIVECDLTALVNIKKEYSSDDDSLSNNYCQTSLNIDVCEQLDSNVKTEEDCKIAKAKCDSTALVNIKKEYSSDDDSLSNNFCQTSLNIDVCEQLDSNVKTEEDCTIAKAQCDSTALVNIKKEYSSDDDSLSNNYCQTSLNIDVCEQLDSNVKTEEDCTIAKAKCDSTALVNIKKEYSSDDDSLSNNYCQTSLNIDVCEKLDSNVKTEEDCTIAKAQCDSTALVNIKKEYCSDDDSLSNNYCQTSLNIDVCEQLDSNVKTEEDCTIAKAQCDSTALVNIKKEYCSDDDTSLNNYCQTSLNIDVCEKLDSNVKTEEDCTIAKAKCDSTALVNIKKECDDDSLVNNHCQTSLNIDVCEQLDSNVKMEEDCKIAKAKCDSTALVNIKKECDDDSLVNNHCQTSLNMDVCEQLDSNVKTEEDCKIDIVECDLTALVNVKEECCSDANSLGNNDCKTLLNINVCEQLDGKNFSRNAVSKSSRRGNFKCIICDYTSAWKQSVVRHVNTKHTNSEEKCFKCALCDHTNKQKWQLSRHIINKHRKIEERPYKCKLCSYTTVWKANLSKHITNNHRSIDETPFKCHLCHYTTVLKSKLSTHIFSNHRIIKKKNFKCESCNYICAYKVSLSKHIISKHTSVKKKSYKCQFCNYVSAWKKDLSEHIICKHKSIRERPYKCDLCDYASLRKRRLSAHIISMHNSIQLTPYKCELCDYTTVHKENLLTHIVTKHGSSEEKPFKCDLCDFTSVEEISLSKHIISSHRKMKEKRFKCNLCNHATVQKGQLSKHIIFKHGSFEQRPFKCTMCKYGTVVRAHLSRHIMARHRSMEERPFKCEFCSYAAVKKDSVSSHIISKHKGIQDRPFKCELCNYTSVQKRNMSNHIINKHKSIEARPFKCDLCDYSTVWKTCLSDHIKIKHRSYEEKPYKCEFCNYATALKKYLSNHIISKHRRIEDRPYKCKLCDFATVQKGHMSIHMFSKHKSIEERRFKCKMCSFTSLRKYELSRHIISHQGVIQEGPFICDLCGYNTVEKQDLSRHFISKHRSIEHYSLFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -