Telo083417.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tillus elongatus
Gene Symbol
-
Assembly
GCA_964006375.1
Location
OZ023270.1:27565913-27567935[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 3.1 5.7e+02 3.6 2.4 1 23 106 129 106 129 0.91
2 16 0.11 20 8.2 1.8 1 23 135 158 135 158 0.96
3 16 0.019 3.5 10.6 2.4 1 23 166 189 166 189 0.98
4 16 0.0042 0.78 12.6 1.4 1 23 195 218 195 218 0.98
5 16 0.0014 0.25 14.2 3.1 1 23 224 247 224 247 0.97
6 16 0.00076 0.14 15.0 2.0 1 23 253 276 253 276 0.98
7 16 0.0018 0.33 13.8 1.5 1 23 282 305 282 305 0.95
8 16 0.014 2.6 11.0 7.5 1 23 321 344 321 344 0.98
9 16 0.0066 1.2 12.0 0.3 1 23 350 373 350 373 0.97
10 16 0.022 4.1 10.4 2.8 1 23 379 402 379 402 0.97
11 16 0.0017 0.31 13.9 0.3 1 23 408 431 408 431 0.92
12 16 0.033 6 9.8 1.4 1 23 437 460 437 460 0.98
13 16 0.0012 0.21 14.4 0.8 1 23 482 505 482 505 0.98
14 16 0.38 69 6.5 7.0 1 23 511 534 511 534 0.96
15 16 0.0023 0.42 13.5 3.2 1 23 540 563 540 563 0.98
16 16 0.0018 0.33 13.8 1.5 1 23 569 592 569 592 0.95

Sequence Information

Coding Sequence
ATGTTTGATATTAGTGTACCACAGGCTGATGCCATTCATCAAACGTCTAAATATCAAATCACTCAATTAGAGGAATCTGTTAAATTTGAAGTAGAGGAACATGACTTGGATCAGCTTCAGCCACATCAGGAATTTAAGGAAGAGCACTTTGATGATACTAAAAACTGGATACCTGGCCTGGATGGTAAGCATAACCTGCTTGTTGTCAATAAATGTGAGAGTCAGGGATCATCCGAGGATGCTGTGAGAATAGATGTACACACTGTACcaaaaaggtataataaaacaTCACCAGACCAAAGTGGGGAATATCATTTTCAATGTTCATTCTGTGACTATAAAAATGTACAGAACAAAAATGTAAAGATGCACACCACATTAAAACATCCTGAAGTGAAACCTTATCATTGCCCATCATGTAATTATCAGAGTGAGGAGAAAAGAAACTTAGATAGTCACATTAGAGAAAAACACAAACACACTGTAGAGAAACATTACCAATGTTCATTCTGTGACTATGGAAATAGGACAAGAAAGATGTTACAAAATCACATTAAGTCAAAACACGTTAGCGGGAAagcttatcagtgttcatcatgtgattataaaGCTATGCAAAGAGGAACGTTACGCAGGCATGTTAGGTCAAAGCACACTGGAGAAGCACTTTTTTACTGTTCTTTGTGTGAGTATAAGACTCGACGAAAAGACACTTTATCAAATCACATTAAACGCAGACATACTGTAGACAAACCATATCAATGTGCATTGTGTGATTATAAATGTGTTCTTAAAGAAAgtttaaaaagacatattaatTCGAACCATAACAAAGAGGGACCTTATCAATGTCCCTCCTGTGATTATATAAGTACACACAAACCATATTTAGAAAAGCATATTACATATAATCATACTAAACGGGAATATACTGAACAGGAATATACTAAACAGAGACGTTATAAGTGTCCCTCATGTGATCATAGAAGTAAACATAACCACACTTTACTAActcatattagatcaaaacacacaggagaaaaaccttatgcatgttcatcatgtgattataggAGTGCAGACGGACCAAACTTACgaaggcatattaaatcaaaacacacagaagagaAACCTCATCAGTGCTCATTGTGTGATTATAGAACTCTGCAAAAAGTAAACTTACAAAGTCACATTAAATCGAAACACACTGAAAAAAGAATCTACGCGTGTACTTTATGTGTTCGTGTATATAAAGATAAAATAAGCTTACAAAGACACGTTAGTGCAAAACACACTGTACAGAAACATTACCAATGTTCATTCTGTGACTATGGAAATGGGACAAGAAAGATGTTACAAAATCACATTAGGTCAAAACATGAAAATGGGACAAGAAAGATGTTACAAAATCACATTAGTTCAAAACACGTTAGAGAGAAAGCTTATCAGtgtccatcatgtgattataAAGCTATGCAAAGAGGAACGTTACGCAGGCATGTTAGGTCAAAACACACTACAGAAGCACTTTTTTACTGTTCTTTGTGTGACTATAAGACTCAACGAAAAGACTGTTTATCAAgtcacattaaacacaaacataCTGGAGACAAACCATATCAATGTGCCTTGTGTGAGTATAAATGTGTTCATAAAGAAAGTTTAAAAATACATATTAATTCGAACCATAACAAAGAGGGACCTTATCAATGTCCCTCCTGTGATTATATAAGTACACACAAACCATATTTAGAAAAGCATATTACATATAATCATACTAAACAGGAATATACTAAACAGAGACGTTATAAGTGTCCCTCATGTGATCATAGAAgAGTGCAGACAGATCAAACATACgaaggcatattaaatcaaaacacaccgAAGAGAAACCTCATCAGTGCTCATTGTGTGATTATAGAACTCtacaaaaagtaa
Protein Sequence
MFDISVPQADAIHQTSKYQITQLEESVKFEVEEHDLDQLQPHQEFKEEHFDDTKNWIPGLDGKHNLLVVNKCESQGSSEDAVRIDVHTVPKRYNKTSPDQSGEYHFQCSFCDYKNVQNKNVKMHTTLKHPEVKPYHCPSCNYQSEEKRNLDSHIREKHKHTVEKHYQCSFCDYGNRTRKMLQNHIKSKHVSGKAYQCSSCDYKAMQRGTLRRHVRSKHTGEALFYCSLCEYKTRRKDTLSNHIKRRHTVDKPYQCALCDYKCVLKESLKRHINSNHNKEGPYQCPSCDYISTHKPYLEKHITYNHTKREYTEQEYTKQRRYKCPSCDHRSKHNHTLLTHIRSKHTGEKPYACSSCDYRSADGPNLRRHIKSKHTEEKPHQCSLCDYRTLQKVNLQSHIKSKHTEKRIYACTLCVRVYKDKISLQRHVSAKHTVQKHYQCSFCDYGNGTRKMLQNHIRSKHENGTRKMLQNHISSKHVREKAYQCPSCDYKAMQRGTLRRHVRSKHTTEALFYCSLCDYKTQRKDCLSSHIKHKHTGDKPYQCALCEYKCVHKESLKIHINSNHNKEGPYQCPSCDYISTHKPYLEKHITYNHTKQEYTKQRRYKCPSCDHRRVQTDQTYEGILNQNTPKRNLISAHCVIIELYKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-