Telo007256.1
Basic Information
- Insect
- Tillus elongatus
- Gene Symbol
- Sall1
- Assembly
- GCA_964006375.1
- Location
- OZ023262.1:150350401-150353394[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1 1.9e+02 5.1 1.8 1 18 514 531 514 537 0.75 2 14 1.3 2.4e+02 4.8 0.6 2 23 617 639 616 639 0.91 3 14 0.0068 1.3 12.0 0.7 1 23 647 669 647 669 0.98 4 14 0.00093 0.17 14.7 1.4 2 23 672 693 671 693 0.97 5 14 1.5 2.7e+02 4.6 2.6 1 14 699 712 699 721 0.73 6 14 8.6e-05 0.016 18.0 5.6 2 23 728 749 727 750 0.95 7 14 0.94 1.7e+02 5.3 1.3 6 23 764 781 762 781 0.95 8 14 5.3e-05 0.0097 18.6 2.4 3 23 788 809 787 809 0.97 9 14 0.12 23 8.0 0.0 2 23 825 845 824 845 0.96 10 14 8.6e-05 0.016 18.0 1.8 1 20 851 870 851 873 0.92 11 14 0.0002 0.036 16.8 0.2 1 23 881 903 881 903 0.99 12 14 0.0016 0.29 14.0 3.7 1 23 909 931 909 931 0.98 13 14 9.7e-07 0.00018 24.1 3.5 1 23 937 959 937 959 0.98 14 14 0.0087 1.6 11.7 5.1 1 23 965 987 965 988 0.95
Sequence Information
- Coding Sequence
- ATGGATCAAAACAACATTATTTGTCCGGTCTGTACTTTATATTTGAGACCAGGTATAACCCTGAAGGCCCATTTAGCAAGTCACcccaaacaaaaaattattgaagCACTAGTATCTCTTTCACATTCAGAAGATGTCCATAAAGGTGAAAACATCCAGGTTGTGCCTGGAACTAGCAGTGGTGGTAATTCACAAAATAATATAGTTGCAAGTAATGCTACAAATGGTGAAAATATTGGTGATGTTTCTCCAAACTCTGGAGTACATGGAAATCATCTGTTTATTTATCAACAAAGTATGAGCACCACTGGATCACAACAAAATGTACTTAATGTGAATCCTTTGGCTCAGCAGTATGTAATTCCTGCAGTATTTAATTCTCAGATGATGCCGTATGTATACCAGCAGCAGCAGGTTATTATGTCTAGTGGTGGTTGTGTTCCACCACCAATTCGTGCTCTTTCATTTGACTTAACATCAGCTTCTGATACTAATGCATCTGTAAATGATCAAACCTGTACAATTACTGAAGAAGCTCATGAAAGTGATGTTGTATCTTCCGATTCAAATCCACACATTTGTGAGGTATTAAATTCTGAAGAGAATAACAAACCTTTAGCTGAAACAATTATTGGCAAAGATGAGAAAATTATTGTACACAAAGAAGAGTTAAATGAACCTGATGTTTTGAATGCTGAAGTTGACACATCATATCAACATAATGAGGAGGAATACAATGAAGATGATTGTATGAGTTCGCCCCATTCTCAAGGTTCAGAATGGAGTCTCAAAATAAGAACTGACTTAAATAAAGCATGTCAAACACACAACACAAGTAACTTGTCTCCCAGGTCTTTTATACAGGAAGATGATGCAGCTTTGGATAATATTGAAACTGTGGAACCTGAGTATTATTTTCCCAGTGAATCAGAAGTACCAACTACTAATACAGTAAATGTCAGTATGCAAGGGTATGGTCAGCCAGATACAGTTTACTCTGCCTCCAATATTTTACAGTCTAATGAAAATATTGACTTTGTGGAGATGGATGGAATGCAAGTGATTATTAATGGTTTTACTACTAATCATATAATTTCTCAAGTTGAAAACTTTGACAATAGTAAGCCTGAAAGACCTGGTGTGTTAATGACAATTGGTGGTATGGTTGATAATTCTAAAGATATAATGAATGAACATAGAGAAGATAGTTTTTCACATGATGGAGCAAGTGTTGACATTAGAGCTGATGAACACATGCCTCCAAGGGGAGAACTTTCTGGCCAAGAAAGCATGGGGGGTGCAAGTGATATAACATGGAATAGAATTCACTATAATGAAGCAAATTCTGCTATGTCTTCCTCATATGACCTAATGGGTAGAGATACTTGGGAAGTAACTGACAGTTCGGATGTCGATGCTGCACCTATACAGAGCAGTATTTCCTCACAAGATGGTTACTTAGCTAATGTAGCAAATGGTCAAAATGCAGATGATGAGGATATACCTGCAATTGTAAGTTTTAGTGGTCCTCCTTTAAATTTTAAGTGCTCAACCTGTGGCGAAGCTTTCAAGTGTTTAAAAGACAGGAAGGAACATGAGTTGGAAGAGCATCCTGAAAAGAAAAAACCTAACATTATTGGAGCAGAAATAGGAAAGAAAAAAGTAAGGAAGCTAGTAGTAAAAGCTAAACAAGACAAAACCGAAACTGAAACCAACTTTGATAATGTattcactaataaattaaaattagaaGCTTCAACAGAAATGGACCATTCAGAACTTTTAACAACAGCAATTCAAGAACCACAGGAAGTGAAGAGTGAAAATGCCCCTATTGAGTTAAAAGTGGTATGTTCAATATGTGAATGTGTATTACCACACACTAAAGCATTGAAAGATCACAAAATAGAAATTCATAATGTTGCCCCCGATGTAAGGCATAAATGTGCAAGTTGTGGTGAAGCATTCCCTAACGATTATAAATATACAGAACACTTAAAGATTCATCCTTTAGAATGTAGACTGTGTGGAAAGTTATTCTATAGAAGACAAAATATTCAGCTTCATATGAAACGCCACCTTGGTATAAGACCATACAAATGTGAGGTATGTGAAAAGTCATTTTTGAccaagcaaaaacatgatgaaCATAAAAACACACATACAGGAGAATCACCCATTAAGTGCTCATTATGTGATGAGACATTTAAACGACATTCCAATTTGCTTCAGCATCGAAACAGacatcattttaactttaaaaagAAAGTGAAAGATTATATATGTTTCTGTGGTGAGATTTTTCATTCTAAGAAGAAATTGGCTTGGCACAAAGAAATACATGATGCTAAACCAAAAGCTTGTACACAGTGCAATGAGAAGTTTATTCACATGTCTAGTCTGACACGTCACATGCGCAGAGCCCACAATGAAAGGTTTCTTCCCAAGGAAGAAAGATGCAGTGAGAATGTAGAGTGTCCTGTTTGTAAAGGAGTTTATCTGAGATCATCATTAGAAGTTCACATCCGCAATCATAGTGGCCAAAGGCCATTTACATGCACCATctgtaataaagattttacaaCAAAATGGAATCTCAAATTACACAAGTGGACCCATGCCTCTCGTACTGCTAAACCTTTCAAGTGTGATCAATGTAAAGGTGCATTTATAAGGGAATCCGACTATATTGCCCACATGAACTCCCATAAGAGTGTGCGTCCTTACACTTGTAACTACTGTGGAGCTCAGTTTATAAGAAAATACAATTGCCAACGTCATGTTAAGGAGCATGAAAATGGGAAAACATTCAATTGTCAGATTTGTGGTAAGTCTTTTCACAGGTCATACTATTTGAAGGATCATATGAGGGTACATAGTGGGGCAAGGCCCTTCGCATGTCATGTGTGTGGTAAAACTTCTGCCACGAAGTCTAATCATAATAAACATGTACAAATACATCATGCTAGGGAGCCTGTTAACACTGAACATTAA
- Protein Sequence
- MDQNNIICPVCTLYLRPGITLKAHLASHPKQKIIEALVSLSHSEDVHKGENIQVVPGTSSGGNSQNNIVASNATNGENIGDVSPNSGVHGNHLFIYQQSMSTTGSQQNVLNVNPLAQQYVIPAVFNSQMMPYVYQQQQVIMSSGGCVPPPIRALSFDLTSASDTNASVNDQTCTITEEAHESDVVSSDSNPHICEVLNSEENNKPLAETIIGKDEKIIVHKEELNEPDVLNAEVDTSYQHNEEEYNEDDCMSSPHSQGSEWSLKIRTDLNKACQTHNTSNLSPRSFIQEDDAALDNIETVEPEYYFPSESEVPTTNTVNVSMQGYGQPDTVYSASNILQSNENIDFVEMDGMQVIINGFTTNHIISQVENFDNSKPERPGVLMTIGGMVDNSKDIMNEHREDSFSHDGASVDIRADEHMPPRGELSGQESMGGASDITWNRIHYNEANSAMSSSYDLMGRDTWEVTDSSDVDAAPIQSSISSQDGYLANVANGQNADDEDIPAIVSFSGPPLNFKCSTCGEAFKCLKDRKEHELEEHPEKKKPNIIGAEIGKKKVRKLVVKAKQDKTETETNFDNVFTNKLKLEASTEMDHSELLTTAIQEPQEVKSENAPIELKVVCSICECVLPHTKALKDHKIEIHNVAPDVRHKCASCGEAFPNDYKYTEHLKIHPLECRLCGKLFYRRQNIQLHMKRHLGIRPYKCEVCEKSFLTKQKHDEHKNTHTGESPIKCSLCDETFKRHSNLLQHRNRHHFNFKKKVKDYICFCGEIFHSKKKLAWHKEIHDAKPKACTQCNEKFIHMSSLTRHMRRAHNERFLPKEERCSENVECPVCKGVYLRSSLEVHIRNHSGQRPFTCTICNKDFTTKWNLKLHKWTHASRTAKPFKCDQCKGAFIRESDYIAHMNSHKSVRPYTCNYCGAQFIRKYNCQRHVKEHENGKTFNCQICGKSFHRSYYLKDHMRVHSGARPFACHVCGKTSATKSNHNKHVQIHHAREPVNTEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -