Basic Information

Insect: Tillus elongatus
Gene Symbol: prdm10
Assembly: GCA_964006375.1
Location: OZ023266.1:132018009-132043987[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00041 0.076 15.8 0.3 2 23 466 487 465 487 0.95

2 13 5.3 9.8e+02 2.9 0.4 1 10 533 542 533 545 0.91

3 13 0.0032 0.6 13.0 0.5 2 19 577 594 576 598 0.93

4 13 0.0013 0.23 14.3 2.5 1 23 610 632 610 632 0.94

5 13 2.2e-05 0.0041 19.8 0.5 1 23 647 669 647 669 0.98

6 13 0.00088 0.16 14.8 2.7 2 23 678 699 677 699 0.97

7 13 0.15 28 7.7 0.5 1 19 706 724 706 726 0.95

8 13 0.002 0.36 13.7 3.5 1 23 734 757 734 757 0.96

9 13 0.00032 0.059 16.2 1.6 1 23 762 784 762 784 0.96

10 13 0.0018 0.34 13.8 3.6 1 23 790 813 790 813 0.89

11 13 0.015 2.8 10.9 1.6 1 23 845 868 845 868 0.97

12 13 0.00013 0.024 17.4 2.2 1 23 890 913 890 913 0.97

13 13 0.0049 0.9 12.5 3.4 3 23 951 972 949 972 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00041	0.076	15.8	0.3	2	23	466	487	465	487	0.95
2	13	5.3	9.8e+02	2.9	0.4	1	10	533	542	533	545	0.91
3	13	0.0032	0.6	13.0	0.5	2	19	577	594	576	598	0.93
4	13	0.0013	0.23	14.3	2.5	1	23	610	632	610	632	0.94
5	13	2.2e-05	0.0041	19.8	0.5	1	23	647	669	647	669	0.98
6	13	0.00088	0.16	14.8	2.7	2	23	678	699	677	699	0.97
7	13	0.15	28	7.7	0.5	1	19	706	724	706	726	0.95
8	13	0.002	0.36	13.7	3.5	1	23	734	757	734	757	0.96
9	13	0.00032	0.059	16.2	1.6	1	23	762	784	762	784	0.96
10	13	0.0018	0.34	13.8	3.6	1	23	790	813	790	813	0.89
11	13	0.015	2.8	10.9	1.6	1	23	845	868	845	868	0.97
12	13	0.00013	0.024	17.4	2.2	1	23	890	913	890	913	0.97
13	13	0.0049	0.9	12.5	3.4	3	23	951	972	949	972	0.96

Sequence Information

Coding Sequence: ATGGATACAATAGTTGAGGGGCCTCCAGAAGATGGGGCCCACGAAATGAATTTGATTACTACGCAGGATTGGAATACTGCGAATAACCAGGAGGTTATTAATAACAttagtaacattaataataatgcTACTCTTCTCTATATTGCTGTTGAGTATATTAAGGAGGAATATAATAATGAAGAACAAGAAAAACAGCTGCAGCATTCCAACTTGGTTGCACAGGCGGATAGTTTCAATAATTTTAATCATGTTAGCCCGTTAGATCCAAATATGAGTTCAGTGGCACGATACAGTCCTGTTTACACTGAACCAACCACTAGTTATAATCCAGTTGTTATTCATCAGCTTGTCacatcaaacaatacaaataatgtGACAGAAGACTTTAATGTAAACTTAAGTCATAATTCATCTTTGGATTCAATGCCTGCGGTATTGTGCAATAATGATATTAGAGAAGTTGCCAGTGATCAGTATTTAAACTTATCAAAAAATCAGTCCAATGTTGCATCATTGCATCCCAATTCCAGCTTACAATTGGTACCAGAAAATGAGCAAGAAGTCAAATTGTTAATCACAGATCAGGCAACAGGCATGTCATACACAGTGAGTACACAGGAACTTCTAGTTGAATCTTGCCTGGAAGACCAGCAGCTTTTGGATGCTTTAGCACCAGACCCTACTCTTCTCGATACAGACCTTCTGGCACTGGATGTGAATACGCTGAAGAACGAACTAAATGAAGACATTATTAATAATGCTATTGGTAACCCAGTTATTTCTAATACAGTAATTGGACATTCTGAACCACTTGTTGTCAATAGTTACATATCTGATTTAAATCAGAGTAACATTAGAAATGATGATGTCTATAAGCTAGAACTAAGACGAAGGCGTCAGAACGAAATGGAAGTTGAAGAACAGCTTTTTTCCAAAGTATATAATGTCATTGATAGGCCAGTGCCGTCAAGAGCTGGGGCTACTCTTTCCAATTCATATTTCCTTATTAATAAAATTGGAGATGAATTAGGTGTCTTTGCCAAAAAAGCAATCGCGAAACAAACTCAGTTTGGCCCACTTGAAGGAATTTTAGTTAATAGAGATATTCAGGGAACGAGTTTGTCTAATAAATTAGATTATTTAATTGAAAGTGGAAACCGCACTGTCTTTAGATTGGATGTGTCAGATGCAGgTTTAACGAATTGGATGGGTTTTGTAAGAAAAGCTACCAATTTTACagaacaaaatttagttcttagCCAGAGAGGAGGTGGCTTATTCTACACTACAACGAAAATTATTTATCCCAAGGAAGAATTAAAGgttGGTTACAGTGTTTCATATGCAGAACATTTTAAATTGCCTTATCTGCAAGCACCAGTCGTGCTTCAGTGGCCTTGTTTTGAATGTCCTGAACACTTTGAAACACCTGAAGAACTTCAAAAACACTTGAACTTCCATGATGAGCAAGATGAAGAGTTACAGAAAAAACTGCTAAAGATAAAACGAAACAAACCTCGACAAATGATAAAAAGCCAACAAGGAGAAACTTTGGAATGCAAACTTCAGATTAACAAAAATAGACGTTCGGCAGCTTTTCAGTGCAAACACTGTAAGGCTATGTTTCTTCAGCCATGTTTGAGTCTTTTGTCTAGTCATTTACTCGATGCACATAAGCTTCCTGAAAATGCTGAAGTTAATAAACATTTTGATAGTTTTATGTATATAAAATGTATGAACTGTGATAAGAACTTCACCTCTAAGGCATTATTAAAAATACATGACCTACAACATAAAACTGACGATGGTTCTGCAGAACAGACTAATCATATATGTCCAGAGTGTCACAGGAAGTTTCCCACTCAAAAGATGTTAGTCAGTCATGTGACCCAGCACGGCAAGGAGGAAAAGGAACTAGGTGAAATTCCTAAAGAAAATTTCAGGTGTCCTGTTTGTTATAAGATGTTTCCTGTCAGGGAGCGTTTGCAGCGTCACATGAACGTTCATGGTCCTGAGGAAGCAAAGCCATTACAGTGTAGCACTTGCGAGAAACGTTTTGTTAATAACTCAGCTCTGACTTGCCACATCAAGACCCACAACAGTGGAAAGAAAATCTTCGAGTGTCCAATGTGCAAAGAAGGTTTCGACCACATACTGAAACTCAAACATCATGTTCCTTTTCACCTGGAGAACAATCAGTACACGTGCCCTCACTGTAAGAAAGTGTTTAAGAAGTACAGCATCATACGTAAACATATCAGAGCTTTCCATTGTGAGAGAAAGCACATATGCAAAGATTGTGCGAAGACTTTTCCAACGCTTGATAAACTAAGGATGCATTTACTGAAACATTCAGATCACAGAGAATTTTTGTGTGCCGATTGCGGTAAGCAGTTCAAGAGGAAGGACAAGCTTAAGGAACATTGCAAGAGGATCCATAACAAGGAGAGGGAGAATAACCCATCCAAGGAGGATCCTTCATCCAAGAAGTTCACACCTAAAGTTGTACCTACTGATTTTCACAGATTCATTTATAAATGTCATTCTTGTCTAGTTGGTTTCAAAAGAAGAGgcATGTTAGTAAACCACTTGGCTAAACGTCATCCAGACATCAGTCCAGACTCTGTTCCAGAACTAAACATGCCTATTTTACGCACAACAAGAGACTACTACTGTCAGTACTGCGATAAAGTATACAGAAGCAGCTCTAAACGTAAGGCACACATTTTAAAGAACCACCCTGGAGCAGCTCTTCCAGTCAGTAACCGGAAGCAGGGGGCATTGGCAGAGAGTCTTCCCAATCCGACCTTCTCACAGACTGTAGGAAGTGTCACAACACATCCTCAAAACTGTCAGTGGTGTCATAAGCAATATGCTAGCAAGGCCAAGTTATTGCAACATCAGAGAAAGAAGCATCCTGATCAGATAGCTCAGAAGAGCAACAGTGACAGCAGTGAAGAGGGCAAGACAACACCCAACAGGGCTGGAAATGAAAACAATAACAACAgcaataatattaacaataataacaatagtaataatagtaataacatgAGCGACCAGAGCTGTGATGAGACACAGGTAGAGGTTAATGGGGTAGTGTCCAATGAGCTGGACGATAGTTGCTTGCAAGATCAGTATAAGaTCACTGACGATATTCTGACTCTCAACACTGACATTGAAGAATTCAGTCATGAAGACTTGTTACCATTGTCTAATTCTGACGATTCCTTTTCTCAGTCTGCTGCTAACTTGGATACTTCTAGTTCACATTTATATCGCCTTTTAACAACCACTAGTAATGGTAAGTCACATACTCTAGTAGTAAAATGA
Protein Sequence: MDTIVEGPPEDGAHEMNLITTQDWNTANNQEVINNISNINNNATLLYIAVEYIKEEYNNEEQEKQLQHSNLVAQADSFNNFNHVSPLDPNMSSVARYSPVYTEPTTSYNPVVIHQLVTSNNTNNVTEDFNVNLSHNSSLDSMPAVLCNNDIREVASDQYLNLSKNQSNVASLHPNSSLQLVPENEQEVKLLITDQATGMSYTVSTQELLVESCLEDQQLLDALAPDPTLLDTDLLALDVNTLKNELNEDIINNAIGNPVISNTVIGHSEPLVVNSYISDLNQSNIRNDDVYKLELRRRRQNEMEVEEQLFSKVYNVIDRPVPSRAGATLSNSYFLINKIGDELGVFAKKAIAKQTQFGPLEGILVNRDIQGTSLSNKLDYLIESGNRTVFRLDVSDAGLTNWMGFVRKATNFTEQNLVLSQRGGGLFYTTTKIIYPKEELKVGYSVSYAEHFKLPYLQAPVVLQWPCFECPEHFETPEELQKHLNFHDEQDEELQKKLLKIKRNKPRQMIKSQQGETLECKLQINKNRRSAAFQCKHCKAMFLQPCLSLLSSHLLDAHKLPENAEVNKHFDSFMYIKCMNCDKNFTSKALLKIHDLQHKTDDGSAEQTNHICPECHRKFPTQKMLVSHVTQHGKEEKELGEIPKENFRCPVCYKMFPVRERLQRHMNVHGPEEAKPLQCSTCEKRFVNNSALTCHIKTHNSGKKIFECPMCKEGFDHILKLKHHVPFHLENNQYTCPHCKKVFKKYSIIRKHIRAFHCERKHICKDCAKTFPTLDKLRMHLLKHSDHREFLCADCGKQFKRKDKLKEHCKRIHNKERENNPSKEDPSSKKFTPKVVPTDFHRFIYKCHSCLVGFKRRGMLVNHLAKRHPDISPDSVPELNMPILRTTRDYYCQYCDKVYRSSSKRKAHILKNHPGAALPVSNRKQGALAESLPNPTFSQTVGSVTTHPQNCQWCHKQYASKAKLLQHQRKKHPDQIAQKSNSDSSEEGKTTPNRAGNENNNNSNNINNNNNSNNSNNMSDQSCDETQVEVNGVVSNELDDSCLQDQYKITDDILTLNTDIEEFSHEDLLPLSNSDDSFSQSAANLDTSSSHLYRLLTTTSNGKSHTLVVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -