Basic Information

Insect: Tillus elongatus
Gene Symbol: -
Assembly: GCA_964006375.1
Location: OZ023270.1:83016187-83021607[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.018 3.2 10.7 0.6 2 23 190 212 189 212 0.96

2 11 0.00061 0.11 15.3 2.3 1 19 218 236 218 240 0.94

3 11 7e-05 0.013 18.2 5.5 1 23 246 268 246 268 0.99

4 11 0.013 2.4 11.1 1.7 1 23 274 296 274 296 0.97

5 11 0.00042 0.077 15.8 4.8 1 23 302 324 302 324 0.99

6 11 0.00034 0.062 16.1 0.8 1 23 330 353 330 353 0.96

7 11 0.00024 0.044 16.6 0.2 3 23 361 381 360 381 0.97

8 11 1.5e-05 0.0027 20.4 4.1 1 23 387 409 387 409 0.98

9 11 0.00078 0.14 15.0 6.0 1 23 415 437 415 437 0.97

10 11 4.6e-06 0.00085 22.0 1.8 1 23 443 465 443 465 0.99

11 11 0.03 5.6 10.0 1.3 1 23 471 494 471 494 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.018	3.2	10.7	0.6	2	23	190	212	189	212	0.96
2	11	0.00061	0.11	15.3	2.3	1	19	218	236	218	240	0.94
3	11	7e-05	0.013	18.2	5.5	1	23	246	268	246	268	0.99
4	11	0.013	2.4	11.1	1.7	1	23	274	296	274	296	0.97
5	11	0.00042	0.077	15.8	4.8	1	23	302	324	302	324	0.99
6	11	0.00034	0.062	16.1	0.8	1	23	330	353	330	353	0.96
7	11	0.00024	0.044	16.6	0.2	3	23	361	381	360	381	0.97
8	11	1.5e-05	0.0027	20.4	4.1	1	23	387	409	387	409	0.98
9	11	0.00078	0.14	15.0	6.0	1	23	415	437	415	437	0.97
10	11	4.6e-06	0.00085	22.0	1.8	1	23	443	465	443	465	0.99
11	11	0.03	5.6	10.0	1.3	1	23	471	494	471	494	0.96

Sequence Information

Coding Sequence: ATGACAAGTGAAACAGGGACAAGAGTATGTAGGACTTGTTTGTCTACAATTGATAATAACTTTAACAGATTATGTGAACAAGATGAAACTTTCACAATAAGTTACAAGAATATGTTATCGACATGTATTCCAGAAAtgGAACTTAGCCATATAGGAGAGGAATTAATATGTGAAAAGTGTATTGAAAGTCTCCTCATATGTTACAGTTTTACAAATAAATGTCGAAATTCTGAAAATGCTATTAGGAATTATATGAATTTGAATaatattttcaatatcaataaaatTGACTTGACCCTGGTTGTGAAACGGCCTCCCGCCACAGTTTATGATGTGATACCAAACATCAAAACAGAAAAGCTACCTGATGAGTTTGAGAATACTTGCATACAAGCCGATTTAGTCCAAGTTAAATATGAAAATGATGATAATATGGAAGAAAATAATATAATCTTGGATGCAGAGTTACCTAATCTAAAACATGAAACCGTTGAAATTAAATCAGAAGAACCATCCGATGGACCAAAGAATAAGAAAGTCAGAAAAAGCAATCATTGCAAAGCATGCGAGTGTCCCATCTGTTCAGCTTGGTTCGAGAAAGTAAAAAACCTCAAGGAACACCTGCGTACAGACCATCCTGGCGCAAAACCTTACAAATGTCAAAAATGTGACCGTTCTTTCCGGCTAGCCCACCAACTGAGAGAACACGAACCAAAACACAATGAGGTTAAACCTTTTAAGTGCGACCAGTGCGACATGAGCTACCACACCAGGCCACACCTAAAACGTCACATGATGAGCCACACTGGCGAGCGACCCTATAAATGCAGCTTCTGTCCTAAAGGTTTTACAGCACATGAAGATAGGCGTATCCATGAGAGGTTACACACAGGAGTCAAACCCTTCAAATGTGAGCAGTGTGATAAGGCTTTCATCAAGAAAACCACCCTGAAATGTCACTTACGTACCCATAAAAATGATAAACCGTTTGCCTGCGATAGATgcgataaaaaatattattataaggGTAAATTAATGGATCATATCAAAATGGTACATGATAAAGTTCCACCGAAGATATGCGAGATTTGCGGTAAAGGCTATACGAGTATTTTTACTTTGAATGTTCATAAAAGGGTGCATGGAGGTGCTCGACCTCACCAGTGTGAAATATGCAAGAAAAGCTTCTATGAGCAGGTCCATTTGAAGTTGCATATGCGGGGGCATACAGGTGAACGTCCCTACTGTTGTGAATTGTGTAAGAAGTGCTTCACACAACCTAATGCATTGAAATATCACAAGCTGATGCATACAGGTGAAAAATCGTTTAAATGTGACGTTTGTGAAAAGTCGTTTGTTGATAAAGGCAGATTAAATAAGCATAAAAAGACACATATTGGAGCTAAGCCTTATTTTTGTGAGTATTGTAACGGGAATTTTGCAGAGGCGGCTTATTTAAAGTATCACAAGAAAAAATTTCATAGTGATTTGATACATGGCAAGCTGAAGGAGGATGTAACAGAAGTGATTGATCCAGTAAAGACTGACGACGTGTCTAAAATAAAAGATGCCGTAAccgaaactgtttttgttaatgTTAAAAAGGAAGTGAATGATGATACAGAAGAACACAGAGAAATcaatgttcaaagtaattttaataatgCAGAATTCGTTTGTGTTAAAGAAGAAATAGCTGCTGACTGA
Protein Sequence: MTSETGTRVCRTCLSTIDNNFNRLCEQDETFTISYKNMLSTCIPEMELSHIGEELICEKCIESLLICYSFTNKCRNSENAIRNYMNLNNIFNINKIDLTLVVKRPPATVYDVIPNIKTEKLPDEFENTCIQADLVQVKYENDDNMEENNIILDAELPNLKHETVEIKSEEPSDGPKNKKVRKSNHCKACECPICSAWFEKVKNLKEHLRTDHPGAKPYKCQKCDRSFRLAHQLREHEPKHNEVKPFKCDQCDMSYHTRPHLKRHMMSHTGERPYKCSFCPKGFTAHEDRRIHERLHTGVKPFKCEQCDKAFIKKTTLKCHLRTHKNDKPFACDRCDKKYYYKGKLMDHIKMVHDKVPPKICEICGKGYTSIFTLNVHKRVHGGARPHQCEICKKSFYEQVHLKLHMRGHTGERPYCCELCKKCFTQPNALKYHKLMHTGEKSFKCDVCEKSFVDKGRLNKHKKTHIGAKPYFCEYCNGNFAEAAYLKYHKKKFHSDLIHGKLKEDVTEVIDPVKTDDVSKIKDAVTETVFVNVKKEVNDDTEEHREINVQSNFNNAEFVCVKEEIAAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -