Telo006622.1
Basic Information
- Insect
- Tillus elongatus
- Gene Symbol
- -
- Assembly
- GCA_964006375.1
- Location
- OZ023262.1:138081006-138082736[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.00045 0.083 15.7 1.2 2 23 144 166 143 166 0.95 2 14 0.063 12 9.0 0.4 1 23 174 197 174 197 0.92 3 14 1.3 2.3e+02 4.9 0.0 2 23 206 228 205 228 0.91 4 14 0.0007 0.13 15.1 0.4 1 23 236 258 236 258 0.97 5 14 0.00034 0.062 16.1 0.8 1 23 266 289 266 289 0.95 6 14 0.0005 0.093 15.6 2.2 1 23 297 319 297 320 0.96 7 14 0.00034 0.063 16.1 1.2 1 23 328 351 328 351 0.97 8 14 0.022 4 10.4 1.2 1 23 359 382 359 382 0.94 9 14 0.00058 0.11 15.4 1.3 1 23 390 413 390 413 0.94 10 14 0.04 7.4 9.6 0.5 1 23 421 444 421 444 0.92 11 14 0.0036 0.67 12.9 0.4 1 23 452 475 452 475 0.97 12 14 0.00087 0.16 14.8 1.6 1 23 483 506 483 506 0.96 13 14 0.0004 0.074 15.9 3.1 1 20 514 533 514 534 0.96 14 14 0.0048 0.89 12.5 4.7 1 23 545 568 545 568 0.97
Sequence Information
- Coding Sequence
- ATGGAAAAACTAGTGGAAAGTGTTGTTGATAATGATGATACCACACTGATGAAGCCCCAATTTGAAGTTGTGACAGTTAAAATGGAATGCCAAGACATCGACAATTTGGATGATAATTTAGCTGAAACGATGAATACCAGCAATGAAATGGAACTACTGTTAGATTATAAAAGAGAAGTGAAAGCTGAGgaaaatttaaaagtaaaaatagaGGATGATTTGAATACATTCATGGGAGACCAAGATATTAAAAACGAAATCTTTAGCGATACTGCCAGCAGTGATAATATAGATTATGAAACTAGTTTTAGTAGTGAATATGTCCACTCTGACAGTCAATATAACATGAGTGGTGACAGTAGTTTACAaaaaacaaacttgtcaaatcatattGCTTCCAAATTtagaaatattcaaaataaagGTTTAAGATGTGACATGTGTGATTACAGTTGTGTATCTAAAACACAATTATCTGCTCACATTATCTCTAAACATGGATTTGTTCAAGGTAATAAATTTAAGTGTGACCAATGTAATTATAGTACTATAGAGGAAACAGAGCTGCTTACTCATGTCACCCTGCAACATAGGAGTATCCAAAAGGGTCCTCTTGAATGTGGCATATGTAATTACATTGCTGCGAGTAAAGACGACTTACCTACTCATATTATCCTTAACCATGGTAGTACTCAAAACAGGTCTTTTAAATGTGGCTTGTGTAATTACAGTACTGCACAGAAAAACGATTTGTCTACGCACATTCTTGAACATGAAAATATTGAGGAAAAAGtttttaaatgtgatcaatgtaATTATAGTACTACACGGAAAAAAGGTTTGTCTGTTCACATTATCCTTAACCATAGAAGTATTCAAGATAAACCTTTTAAATGCAATATATGTGATTATAGTAGTGTATATAAAAAAGACATGTCTAATCACATTATCACCCATCATAGAGATACACAAGATAGACGTTTTAAATGTGACTTGTGTGGTCACAGTACTATGCGGAACCCAGATTTGACTAAACATATTATCTCTAAACATGGAAATATTGAGGATAAACCTTTCAAATGTACCCTGTGTGATTATAGAGCTGTACAGAAGAAAAGCTTGTCTGTTCACTTTATCTCTAAACATAAAAATATTCAAGATAGACCTTATAAGTGTGAATTTTGTGATTTCAGTACTGTACAAAAAAGAAACTTGTCCAGGCATGTTCTTGCTAAACATAAAAATATTCAAGATAGGCCATTCAAATGTGAGCTATGTGATTACAGTTGTGTAGATAGGTGGCAGCTCCCGGGACATATTATTTCCAAACATGGAAGTATTCAGGATAGACCTTTCAAATGTGAATTGTGTGAATTCACTTCTGTGCAGAAAGGAGGTTTGTCTAAACATATTATTTCTAAACATAAAAGTGTtaaagaaagaccttttaaatgtaaccTTTGTGATCACAGTGCAGTGAGAAAAGGTGACTTGACCAATCACATTTTCTCAAAACATAGAAGTGTTGAAgatagaccttttaaatgtggaTTGTGTAATTATAGTTGTGCGCAGAAATCCCACCTAACAAGACATACTATATGTAAACATGGAACTGTTAAAgatagaccttttaaatgtgaattttGCAATTACAGTTGTGTAGAGAAAAAGCAATTATTTAGTCATATAAACTCCAAACACACAAAAAACAGGGCTTTATTTAAATGA
- Protein Sequence
- MEKLVESVVDNDDTTLMKPQFEVVTVKMECQDIDNLDDNLAETMNTSNEMELLLDYKREVKAEENLKVKIEDDLNTFMGDQDIKNEIFSDTASSDNIDYETSFSSEYVHSDSQYNMSGDSSLQKTNLSNHIASKFRNIQNKGLRCDMCDYSCVSKTQLSAHIISKHGFVQGNKFKCDQCNYSTIEETELLTHVTLQHRSIQKGPLECGICNYIAASKDDLPTHIILNHGSTQNRSFKCGLCNYSTAQKNDLSTHILEHENIEEKVFKCDQCNYSTTRKKGLSVHIILNHRSIQDKPFKCNICDYSSVYKKDMSNHIITHHRDTQDRRFKCDLCGHSTMRNPDLTKHIISKHGNIEDKPFKCTLCDYRAVQKKSLSVHFISKHKNIQDRPYKCEFCDFSTVQKRNLSRHVLAKHKNIQDRPFKCELCDYSCVDRWQLPGHIISKHGSIQDRPFKCELCEFTSVQKGGLSKHIISKHKSVKERPFKCNLCDHSAVRKGDLTNHIFSKHRSVEDRPFKCGLCNYSCAQKSHLTRHTICKHGTVKDRPFKCEFCNYSCVEKKQLFSHINSKHTKNRALFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -