Telo082389.1
Basic Information
- Insect
- Tillus elongatus
- Gene Symbol
- -
- Assembly
- GCA_964006375.1
- Location
- OZ023270.1:8166111-8168669[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.046 8.4 9.4 0.2 1 23 136 159 136 159 0.95 2 23 4.9 9e+02 3.0 0.3 1 16 167 182 167 190 0.72 3 23 0.0026 0.47 13.3 0.6 1 23 198 221 198 221 0.97 4 23 0.0011 0.2 14.5 0.2 1 23 228 251 228 251 0.97 5 23 0.0043 0.78 12.6 0.5 1 23 259 282 259 282 0.97 6 23 0.29 53 6.9 0.0 1 20 290 309 290 310 0.95 7 23 0.25 47 7.1 0.6 1 20 321 340 321 341 0.95 8 23 0.01 1.9 11.4 2.0 1 23 351 374 351 374 0.96 9 23 0.025 4.6 10.2 0.9 1 23 382 405 382 405 0.97 10 23 0.0046 0.84 12.5 1.8 1 23 413 436 413 436 0.96 11 23 0.79 1.5e+02 5.5 0.6 1 23 444 467 444 467 0.93 12 23 0.015 2.8 10.9 2.7 1 23 475 498 475 498 0.98 13 23 0.29 53 6.9 0.5 1 23 506 529 506 529 0.93 14 23 1.2 2.3e+02 4.9 0.5 1 23 537 560 537 560 0.93 15 23 0.0047 0.87 12.5 2.3 1 23 568 591 568 591 0.97 16 23 0.25 47 7.0 0.1 1 23 599 622 599 622 0.96 17 23 0.0013 0.23 14.3 1.5 1 23 630 653 630 653 0.97 18 23 0.0057 1 12.2 0.2 1 23 661 684 661 684 0.96 19 23 2.4 4.4e+02 4.0 0.2 1 23 692 715 692 715 0.86 20 23 0.0091 1.7 11.6 0.3 1 23 723 746 723 746 0.96 21 23 0.35 63 6.6 0.5 1 23 754 777 754 777 0.91 22 23 0.0043 0.79 12.6 2.1 1 23 785 808 785 808 0.95 23 23 0.0064 1.2 12.1 0.1 2 23 817 838 816 838 0.96
Sequence Information
- Coding Sequence
- ATGGAAACAGCTGCAGAAACTGATGTCGCTAACACTGAGGGGCAGTTTGAGCCGCTGActgtaaaaattgaaaattatgaCATCTCCAACTCTGACAGCATAACAAATATAGGTGCCATTAGTGAAGCAAAATTGAAGTCTGAATGCAAGAGGGAATTCGAAACGGTTCAAGCTTTTAAACTAGAAGTAGATTATGATTTGAGTACAGTTACGACACAACAGGAAATTAAAAATGAATATGCCAGTGATAATTGCAGCTCTGGCAATGAAGACTGTAAATCAGGTTTAATTTTAAATAGTGATGATTACAGTCAATATGAATCAGGTGATTATTACAGTTCACGGGAAACGAATCCCTCGATATGGAATAGAACTTTCAAGCATACAGGTATTCAAGAGAACCtatataaatgtgagctgtgtgattacagcAGTGTGAAGGAAGGGAATTTGCCGAGGCACGTCATCTCCAAACATGGTAATAGTCAAGataaaccttttaaatgtaagttgTGTGATTATGCTACTGTATGGAAAGCACACTTACCTATGCACGTTATGGCAAAACACGGAAATAGTCAGGataaaccttttaaatgtaaacTGTGTGAGTACTCTAGCGCAAGGAAAGTAAGTTTATCCgaacacattatctccaaacataaGAGTCAGGataaaccttttaaatgtgaattctGTGGTTACGCTGGTGTACAGAAAGTGCAACTGTTGAAAcatatcatctccaaacataaaaGTAGTCAGGAGAGGCCTTTCCAATGTAAGCTTTGTGATTATGGGAGTGTACAGAAATTGGCTCTTTCGAAACACATTATGTCTAAGCACGAGGGTATTCCaaagaggccttttaaatgtgattccTGTAATTTTAGTAGTGCATCACAAGCTGGTTTATCCGCTCACGTAATTTGCAAACATGGAGGTATTCAAGACAAGCCTTTCAAGTGTGAATTCTGTGATTACAGTAGTCTGCGAAAAACGAATTTGTCGACTCACGTCATTTGCAAACATAGAAGTCAAGATAAACGTTTTAAATGTGATACGTGTAGTTACACTAGCGTGGACAAAACGAGCTTTACAAAACACGTCATCTCTAAACATGGAAGTAATCAAGAGAGGCCTTATAAATGTCAGTTTTGTGATTACACCAGTGTGTGGAAAGGAAATCTGACAAATCACGTTATGTCTAAACATACAGTCAATCAAGataaaccttttaaatgtgacatGTGTGAGTACACTAGCGTGCAGAAAATTCATCTGTCGAGGCACGTCATCTCAAAACATAGAAGTAATCAAAGTGAAGCGTTCAAGTGTGACCTGTGTGATTATGCTACGAGATGGAAATTACGTCTCTCAAGACATATTATCTCAAGACACAGAAGCAGTCAAGAGATAGCTTTTAAATGTAAGCTTTGTGATTTCAGTTGTTTACAGAAAGCGAGTCTATTAAAACACATCATTACCACACATGAAGACATTCAAAAGGGCGCTTTTAAGTGTGATTCGTGCGACTACACTAGCGCATGGAAAACATCATTAACGGCTCATATTATCTTCAAGCATAGTAGCATTCaagaaaagccttttaaatgcGACCTTTGTGATTTCAGTAGTATATGGAAAACGAGCTTGTCGAGTCACGTTATTTCCAAACATAAGAGTAATcatgagagaccttttaaatgcaaaCTTTGTGTTTACGCTTGTGTAAAAAGAGAGAACTTGTCGAgacacataatctccaaacaTAAAAGTATCAAAGAGAGACCATATAAATGTGAATTGTGTAACTACGCTAGCGTATGGAAAAAGGCTTTATCGGCACACATTATCTCTAAACATAAAAGTAGTCGAGataaaccttttaaatgtgacacGTGTGATTATGCTTGCGCGCAGAAACAAAGTTTATCTATGCACATTCTCTCCATGCATAGAACTAGTCAAGAtaagccttttaaatgtgagctgtgtgactACGCTACTGCAAGAAAAGTAACCTTATCAGACCATGTAATCTCCAAACACAAGAGCTGCGAGGataaaccttttaaatgtgaattctGTGATTACGCTAGCGTATGGAAATCATCGATATTTAAGCACGTCCTTGCAATACACAGAAATAGTGAAGAtaagccttttaaatgtgaactgtgtgattacactagtgcgAGGAAAATAACGTTATCAGGACATATTATCTCCAAACATAAAAGGATTCAggacagaccttttaaatgtaaattGTGTCCTTACTCAAGTGTATGGAAAAGAAATCTCTCAACGCACGTCATCGCCAAACATGGCAGTTGTCAAAataaaccttttaaatgtgatatgTGTGACTACGCTAGTATGCAGAAACGGCATCTATTAAAGCACATAGTTTCCAAGCATGGGAatattaaagagagacctttgAAATGTGACATGTGTGATTATATTAGTGAATCGAAAGACGACTTAAGTGTGCACATCTCAAACCACAAAGTAGTTGAGATAGAATTTATTAAATGTGAAGGTGATGTATGA
- Protein Sequence
- METAAETDVANTEGQFEPLTVKIENYDISNSDSITNIGAISEAKLKSECKREFETVQAFKLEVDYDLSTVTTQQEIKNEYASDNCSSGNEDCKSGLILNSDDYSQYESGDYYSSRETNPSIWNRTFKHTGIQENLYKCELCDYSSVKEGNLPRHVISKHGNSQDKPFKCKLCDYATVWKAHLPMHVMAKHGNSQDKPFKCKLCEYSSARKVSLSEHIISKHKSQDKPFKCEFCGYAGVQKVQLLKHIISKHKSSQERPFQCKLCDYGSVQKLALSKHIMSKHEGIPKRPFKCDSCNFSSASQAGLSAHVICKHGGIQDKPFKCEFCDYSSLRKTNLSTHVICKHRSQDKRFKCDTCSYTSVDKTSFTKHVISKHGSNQERPYKCQFCDYTSVWKGNLTNHVMSKHTVNQDKPFKCDMCEYTSVQKIHLSRHVISKHRSNQSEAFKCDLCDYATRWKLRLSRHIISRHRSSQEIAFKCKLCDFSCLQKASLLKHIITTHEDIQKGAFKCDSCDYTSAWKTSLTAHIIFKHSSIQEKPFKCDLCDFSSIWKTSLSSHVISKHKSNHERPFKCKLCVYACVKRENLSRHIISKHKSIKERPYKCELCNYASVWKKALSAHIISKHKSSRDKPFKCDTCDYACAQKQSLSMHILSMHRTSQDKPFKCELCDYATARKVTLSDHVISKHKSCEDKPFKCEFCDYASVWKSSIFKHVLAIHRNSEDKPFKCELCDYTSARKITLSGHIISKHKRIQDRPFKCKLCPYSSVWKRNLSTHVIAKHGSCQNKPFKCDMCDYASMQKRHLLKHIVSKHGNIKERPLKCDMCDYISESKDDLSVHISNHKVVEIEFIKCEGDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -