Basic Information

Insect: Tillus elongatus
Gene Symbol: pita
Assembly: GCA_964006375.1
Location: OZ023262.1:301545874-301566877[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.023 4.2 10.3 0.2 1 23 210 232 210 232 0.94

2 10 6.7e-07 0.00012 24.6 3.1 1 23 238 260 238 260 0.98

3 10 2.3e-05 0.0042 19.8 1.7 1 23 266 288 266 288 0.98

4 10 0.035 6.4 9.8 3.3 1 23 294 316 294 316 0.94

5 10 5.6e-06 0.001 21.7 0.7 1 23 322 344 322 344 0.96

6 10 0.00069 0.13 15.1 2.8 1 23 350 372 350 372 0.98

7 10 0.00016 0.029 17.1 4.8 1 23 378 400 378 400 0.98

8 10 1.6e-05 0.003 20.2 0.6 1 23 414 436 414 436 0.98

9 10 0.0005 0.093 15.6 1.2 2 23 442 463 441 463 0.97

10 10 4.9e-06 0.00089 21.9 0.4 1 23 469 491 469 491 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.023	4.2	10.3	0.2	1	23	210	232	210	232	0.94
2	10	6.7e-07	0.00012	24.6	3.1	1	23	238	260	238	260	0.98
3	10	2.3e-05	0.0042	19.8	1.7	1	23	266	288	266	288	0.98
4	10	0.035	6.4	9.8	3.3	1	23	294	316	294	316	0.94
5	10	5.6e-06	0.001	21.7	0.7	1	23	322	344	322	344	0.96
6	10	0.00069	0.13	15.1	2.8	1	23	350	372	350	372	0.98
7	10	0.00016	0.029	17.1	4.8	1	23	378	400	378	400	0.98
8	10	1.6e-05	0.003	20.2	0.6	1	23	414	436	414	436	0.98
9	10	0.0005	0.093	15.6	1.2	2	23	442	463	441	463	0.97
10	10	4.9e-06	0.00089	21.9	0.4	1	23	469	491	469	491	0.97

Sequence Information

Coding Sequence: ATGGAAAATCGTGCTGAAGTATTGCGTGAAATGAAAATCTGTCGATTTTGTTTGGAATCACAGGgaaatttaaacaatatttatgaCAAAGAAGCGACCGATAACAGAACTGTTCCGCTTCCCCTGCAAATAATGGCTTGCGTCGGAATAGAGGTCTTTGCTAATGATGGGATGCCTCAGCTTATTTGTGACAACTGTCGAACACAAGCTGTTAAATCCTATCTATTTAAAACTAATTGTAAAGAGGCCGATGATGCTCTTAAATTATTTATTGCTACAGGAACACTGGCGAAGCCTCATTTAAAAAGAGAATTTGAGAATACACCACTATTAGAATACAACCATCAGCCTTTTCAGCAACAGCCACAAAAGATGAGACGAGCAGCACCAAATATAACCAAAACCAAACGCATTAAAATTGAAGAGCAACGTGATATTATCACATTAAACTACTCTAATGCTATGGAAATAACAGAAGTCAGGCAAGATTACGAAGACCAAATGTCTCAAGACGCCACATTACTCATGGGAATCGatgaagaacaatcaatggaaGAGGAAGATTACAGCGAATCGGAATCTAAGATAAACCCGACCCTACAAGTGAAACAGATCCAGACCGATTGTTACCCTTGTGATCAATGTGAACGTTCGTTTCCTCTCAAGCAGCTGCTTGATATTCACAGGGTGAATCACAACAGGGCGAAGGGATTTGAATGTGAAGAATGTGGTAAGAGGTACTACACAAAACATGATCTGTTAAAACACATGAGAAGTCATTCTGGTACAAAGCCCTATGAATGTGTGGTTTGCAACAAGAACTTTTCAAGGGAGAGCTTGTTGCATAGACACGAGAAGATCCATGTGGATGTGCCGAAATTCTTGTGCAGCCACTGTGACAGAACATTCCTGACTCGCCATGATTTGGATGCTCATGTAGAAAAACACAAGCAGGAAAGGCCGTTTTTGTGCACAATCTGCGACAAGGGATTCGTCTATAAACAAAGTCTGGAACGTCACCTACAAACTCACTCCAAGGAGAAACCACACAAATGCAACTATTGTGAGGCAAGCTTCAATTCAACTATCAAGTTAACACGTCACATAACCTCTCATGCTGGTCTACGTCCGTACCCATGTAAACTGTGCGGACGTACATTCCTGCTTAGTCACCATTTGACTCGCCACATGCGTAGCCACTACGCAGCACAAACCTCACTTGACGCAGCTATCAACCAATACAAATGTGACATCTGCAGCATGTCGTTCAAGAAAAAAGATTCCCTTATTAACCACACTGCTATACACTCTATGGTTAATCTAAAATGCGTTATATGTCACACTAGCTTTGAAAATGCGACAATGGTAAAGCAGCATATAAACACCCATCTTTCTGGACTACCGTTTCCTTGTGAGAAGTGCGATTACTCATTCGAATCTAAAGATCAACTTGAGGAACACATGGTTAAACATGCGGAAATGGAATACGAAGATCAGATTGAAAAAGAAGTCGTGGAAGAGGCGAAACAGCAACAGCAACTTCAAGGGCAAATCCAACATCAAGAGATGATGGGGCATAATGAGGAACTGGAAGATGAGGAAGAATGTGCTGAAGAGGAAGAAGATGATATTGTTGAATTTACAATTACCAATGATATCAATAATCCAGAGGTTGTGAGAAGGTCAACGCGAGTTGTTAAACCAAAAGCTTACCCAGATTTCCTTAAAGATGAGCTAATATCtgaagaagaagaagaggaagaagatgGGGAAGAAGGTGGAGAGGAGACTCGAGAAGCGGAATTCACAATTCAGAATACGAAAGAAAGTGAAGCAAACCAAGAAGAATATACAATTAAACCTATAGTGCGTTCAGAAGGTACAAAAGTTTATACGCGAAAATCACTACCTAATCCAGCCAGTTACAAGTTCAGACCTCCACTAGTTACACCATCAAGTAGTGTAGCCAAAGACCAAGAGCCTGTTACCATAGACAATATTACTCTCTCGAATCATGATATCGAAGCACTGCCTACGAAGAAATATGTTGATATGAAAGTTGGAGATAAAATGCTTCGAGttcaaaagttgatagtttctaAGGAAGAAATGCTGGCGTTGGCTAGGGAAGGCAAGATTGAAGTGAGCGGGAAGACAATTTTGTACAGGAAAGCCGCTGGACCTTCAACGGTGTTGAACAAGGAATTTCCGCTCCCGATGAATACTAGTCAGCCTAAAGAGGTAAAGAAAGTTTATGAAAGGAAATCAAACACTACAGAACATTCGGATGTAAAAAGTAAAACTACAATAGACCAAAATATCAATTTACAAGCCATTCCCCTTGAAGATGTGTCAATCACTCGTTCGTAA
Protein Sequence: MENRAEVLREMKICRFCLESQGNLNNIYDKEATDNRTVPLPLQIMACVGIEVFANDGMPQLICDNCRTQAVKSYLFKTNCKEADDALKLFIATGTLAKPHLKREFENTPLLEYNHQPFQQQPQKMRRAAPNITKTKRIKIEEQRDIITLNYSNAMEITEVRQDYEDQMSQDATLLMGIDEEQSMEEEDYSESESKINPTLQVKQIQTDCYPCDQCERSFPLKQLLDIHRVNHNRAKGFECEECGKRYYTKHDLLKHMRSHSGTKPYECVVCNKNFSRESLLHRHEKIHVDVPKFLCSHCDRTFLTRHDLDAHVEKHKQERPFLCTICDKGFVYKQSLERHLQTHSKEKPHKCNYCEASFNSTIKLTRHITSHAGLRPYPCKLCGRTFLLSHHLTRHMRSHYAAQTSLDAAINQYKCDICSMSFKKKDSLINHTAIHSMVNLKCVICHTSFENATMVKQHINTHLSGLPFPCEKCDYSFESKDQLEEHMVKHAEMEYEDQIEKEVVEEAKQQQQLQGQIQHQEMMGHNEELEDEEECAEEEEDDIVEFTITNDINNPEVVRRSTRVVKPKAYPDFLKDELISEEEEEEEDGEEGGEETREAEFTIQNTKESEANQEEYTIKPIVRSEGTKVYTRKSLPNPASYKFRPPLVTPSSSVAKDQEPVTIDNITLSNHDIEALPTKKYVDMKVGDKMLRVQKLIVSKEEMLALAREGKIEVSGKTILYRKAAGPSTVLNKEFPLPMNTSQPKEVKKVYERKSNTTEHSDVKSKTTIDQNINLQAIPLEDVSITRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -