Telo074148.1
Basic Information
- Insect
- Tillus elongatus
- Gene Symbol
- -
- Assembly
- GCA_964006375.1
- Location
- OZ023268.1:139024292-139028230[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.0021 0.39 13.6 0.4 1 23 14 36 14 36 0.98 2 17 0.00019 0.034 16.9 0.9 1 23 52 74 52 74 0.98 3 17 0.028 5.2 10.1 0.7 2 23 80 101 79 101 0.96 4 17 0.0023 0.42 13.5 0.8 2 23 105 126 105 126 0.97 5 17 0.016 3 10.8 0.2 2 23 133 155 133 155 0.96 6 17 0.00039 0.073 15.9 4.6 2 23 187 209 186 209 0.96 7 17 0.041 7.6 9.5 0.2 2 23 215 237 214 237 0.95 8 17 0.029 5.4 10.0 1.8 1 21 243 263 243 264 0.95 9 17 0.63 1.2e+02 5.8 7.2 1 23 320 343 320 343 0.96 10 17 0.0021 0.39 13.6 0.1 2 23 357 379 357 379 0.95 11 17 0.00033 0.061 16.1 1.2 1 23 385 408 385 408 0.96 12 17 0.18 32 7.5 4.7 2 23 414 436 413 436 0.95 13 17 0.00091 0.17 14.7 0.9 1 23 472 494 472 494 0.98 14 17 0.00066 0.12 15.2 0.7 1 23 500 523 500 523 0.96 15 17 0.036 6.6 9.7 1.4 2 23 530 552 529 552 0.90 16 17 0.038 7 9.6 0.5 2 23 570 591 569 591 0.97 17 17 0.00018 0.034 16.9 1.0 2 23 598 620 597 620 0.97
Sequence Information
- Coding Sequence
- ATGAGACATAAAAAGCGTCTACATGGTTTCCACAGAACTTACAAATGCAGACTCTGTGGTTCCGGCTTCAGTAGCAACCAAGCGCTATTGGAACATCGGGACACCCATATTCAAGCTTCCCTAGAACACAAGagtaaaaaactgaaaaaaggcTACAAATGTATGATCTGCTTAAGAGTCTACAGTCAGAAGAGTAAACTGTTTGAACATATGGATGTACATTCGGAAAAAATAGTAACCTGCGAATATTGCAAAGAGAAATTCACATTCTTAGCTTTACAAACGCACATAAGAAAAGTTCACAAGCACGAAGTCTGCCAAATATGCAACGAAAGCTTCTTCAATAAAAAACTATTCTTCGCTCAtgagaaaatccatttcaaagtGAACAACAACACCTGTGATTATTGTAACAACATGTTCGAAGAACAAAAGGCCCTTTCGGATCATATGGCCTCAGAGCATGTCGGTAATTCAGGTGAAAACAAGTGTGAATCATGCTCGAAGGTATTTTACTGCGAACGTCACTTGAAATATCACAAGTCGTTCTTCCATTTGTCATGTCATGTATGTAGTAAAGAATTTAAAGAGCAGGGTCATCTGCACTTACACATGAGAATGGCTCACAAAAATGAACCTGTTACATGTAAGTTATGTCTCACGGTATTCCCAAATCGCGCTCGTCTCAATATCCATCTTCAGCAGGCGCATTCAATGGTTAGTGTTCATAAATGCAGGGTATGCAAAAAGAAGTTTAATAAGTATTTATTGCTGATCGAACATATGAAGGATTGTAAGAAAGAAACCAAAATCACCTTCAATAAAGAGTCTAAACTTACTGCTAATAATAACACCGGAGAAAACAACAGTGGGAAAGTTATTAAGTCTATGAAAAACATCGGAGAAAGTACGAAGTTCCTTACGTCCCACGATAAGTTGATAGATGTGAGAAACAAGTATCAATGCAGACATTGCCAAAAAGGTTACGGTTGCTATAAAAATTTAAAGAAGCACATGCTCAACTATCATAGGGACATCGTAATTCAGGATCCAAATATCAAATATGAGACTTGTGAACTGTGTCCGAGACTTTTTATCACTAAATATGAGCTTTCGATTCACATGCAAGGTGTACACGTTAACGAACGGAAACATGTTTGCAAGATCTGcgataaagcttataaatatttgCCGAATTTGGTGCATCATACTGCTACAGCGCATTCAGAAAAAGATCTCAAATGTCATCTTTGCGAGAAGAGCTTTAAATGTGAAAATTACCTCAAAGTACATTTGGCACGTCAACATACCAATAAAAAGGAAACAATGCCACCACCACCAGAAATTAAGTTAGAAAATGTAGATTATCCCGCTAAAGAAAGTATAGTTTATCCCGGTAAAGAAAACGTAGATTACATGTGTAAACAGTGTAATCAAAAGTTTGCTTCTGACGTTGAATTTAAATCACATATGTTAATTCATTTGACAATGAAAATGTACGATTGCAAATTATGCGGAGAGAAATTTAAAACTGAATACATTTTAACCAAACATTTGAGGTTAGTGCACTACGAAGAGAAATCGCTGAGATGCGAATTTTGCCAGAAAACTTTCAGTACGAGTTCAATATTAGGTCTGCATCAGTATAGAAAACACAGAAGTTTACTTCCTGAAGATGTAATTGCCAAATACGATGCTAATTTAGTGAGATGTGAAATCTGTAATCAGCAGTTGGTGAATAAAAGTCGATATCTAAACCATCTAAAGATCCATTCGAGACAGAAAGATATACAGTGTACGTTATGCGAACAAAAATTCTCTGATAAACTGAGTTTGTTAAACCATATGAAAACATCACATGCCAATTCATACGGTGTTGATATAAGTATGGTTAAACAAGAAGTAGAACAACAAGAGAAAAACCCTCAAAATATATCAGGtgaaataaatattcaaaatatattGACAAGCCAAACAGTTGATCCAAAACACGCATCAAATCAATTTGCGGGTAGCAAAACCAGTATTCTAAACTCTTTACTCCAGACCAGTATTCAAACAGATGTACCAAACTTAGTAACTACAATAAAAACCGAACAACCAAATTTCACGAACAAAGAGGCGATTTTGGCACCTAATCCTTACTTACTGAAGAATATAACTACACCTACCAATCGATTTAGTATTACAAACCACATACTTCAAAATGCACCGGGGCTCGGTAACGTCTCTACATTATTAAGTGCTCCAATGGAAAAACGTCTACCAAACAGTGTTGCCAATACAATGTCATACATGTCAAAAAGCAACACACTCAACGGGTATGCACCTATGCCAACTAGGAtgcaaatacaaaataaaatacgtATGTCAAACTATATGCCAAATAACATACGTCATCCAAGTAACCCGACTTATATGCCTAGTAATATTCAGGCACCGTTTGTGGCGAGACTGCCatcatatagtaataataataatagtaacaattaCGCTTTGCCACCAATGAATGCGAGCATGCCTCGTCCAAGCCTGAATGCACCTTACGACCATATAAACAGGCCTCATACCAACTTACCTTATGATAAAACTTATAGACCGCTGTATAATGTGCTGTATGAACAGAATAATATGTACCAAAACAATTCCAATATGCCTTATAATAGAACAGATGTGTCATACAACAATCCTAACAAGCCGTTTGGAAGTTTGGGCTTATCTTATGGTAACGTTAATATGCCTCATTCAAACAGTGTTAATGTGCCGCAGTCAAATAGCATTAACATGCCTCATCCAAACACTGTTAATGTGGCGCATGCAAACATGCCGCATCCAAACAGCACTAATGTGTCTCATTCGAGTAGCATTAACATGTCTCACCCAAACACTGTTAATGTGCCGCATTCGAGCAGCATTAATATGCCTCATTCAAACAGTGTTAATGTGCCGCATTCGAGTAGCATTAACATGCCTCATCCAAGCAGTGTTAACATGCCTCATTCGAGTAGCCTTAATATGCCGCTTTCGAACATGAATTCGCCTTATGGTGGTACAAATATGCCTTACGGCGATTCAGGTGTACCTTATGGCAATACAAACATACATTACGGCAATACAAGTATGCCGTATAGCAATACGAATGTGCCGTATAGTAGTATGAGTGTTTCTTATGACCCTAAGGGTATGCCATATGGAAATATGGGTATAACATACAGCCAAGCGAGCACACCGTATACAAATATAAACACGCAATATAAtccaaataatttttcatacgaTCCTAAGATAACTGAATCTCAAAATAAGCCAGTTAACAGTATGtcgaatattttggaaaatatgcCTCAAAATTTGAATTCGCCAAGTGATAGAGCAAACTTGAGGATGGGAGAACCAAATAATTACTACCCGAATCAGTCTGTGAAATCTGAGGTTAGTTATCCGTATTCTGCGAACGTACAGAATCAGTTTGCCGGTCTGGATTCCATTAGTAACTATTCTGAAGATAAATTACCTGAGAATGTAAAGCCTGAAAGCAGCTATTATGGAGATCAGTCATTAACGTACGATATGAGCTACTCGTTTGATAATAGTAAAGAATACACAGATGTTAACAGTGCTTCCTCGCTTAGCTATGCTGAAAACCAGCCATTAGAAACCACACCAAAAACAGAAATTAAGTATGAAAACAGTTATTCTGAAAATCAAGAAACATACGATGTTAATTCTACCCAAAATATAGCTGTTGATAATAGTTTATTTCACCAGGAAAATAAACCGTTAGAAGATATGGGAATGTACGAGAATACAAAAGATTCTATGCCATGGGACGATATAAGCTGCAACAGCAACAGTGATATACAGTTTGCTGTCCAGTACGCAGACTTAGCTAAGTTTGGATGTGATGTAACACCTGTCTATGCCAATGGAACAACTTAA
- Protein Sequence
- MRHKKRLHGFHRTYKCRLCGSGFSSNQALLEHRDTHIQASLEHKSKKLKKGYKCMICLRVYSQKSKLFEHMDVHSEKIVTCEYCKEKFTFLALQTHIRKVHKHEVCQICNESFFNKKLFFAHEKIHFKVNNNTCDYCNNMFEEQKALSDHMASEHVGNSGENKCESCSKVFYCERHLKYHKSFFHLSCHVCSKEFKEQGHLHLHMRMAHKNEPVTCKLCLTVFPNRARLNIHLQQAHSMVSVHKCRVCKKKFNKYLLLIEHMKDCKKETKITFNKESKLTANNNTGENNSGKVIKSMKNIGESTKFLTSHDKLIDVRNKYQCRHCQKGYGCYKNLKKHMLNYHRDIVIQDPNIKYETCELCPRLFITKYELSIHMQGVHVNERKHVCKICDKAYKYLPNLVHHTATAHSEKDLKCHLCEKSFKCENYLKVHLARQHTNKKETMPPPPEIKLENVDYPAKESIVYPGKENVDYMCKQCNQKFASDVEFKSHMLIHLTMKMYDCKLCGEKFKTEYILTKHLRLVHYEEKSLRCEFCQKTFSTSSILGLHQYRKHRSLLPEDVIAKYDANLVRCEICNQQLVNKSRYLNHLKIHSRQKDIQCTLCEQKFSDKLSLLNHMKTSHANSYGVDISMVKQEVEQQEKNPQNISGEINIQNILTSQTVDPKHASNQFAGSKTSILNSLLQTSIQTDVPNLVTTIKTEQPNFTNKEAILAPNPYLLKNITTPTNRFSITNHILQNAPGLGNVSTLLSAPMEKRLPNSVANTMSYMSKSNTLNGYAPMPTRMQIQNKIRMSNYMPNNIRHPSNPTYMPSNIQAPFVARLPSYSNNNNSNNYALPPMNASMPRPSLNAPYDHINRPHTNLPYDKTYRPLYNVLYEQNNMYQNNSNMPYNRTDVSYNNPNKPFGSLGLSYGNVNMPHSNSVNVPQSNSINMPHPNTVNVAHANMPHPNSTNVSHSSSINMSHPNTVNVPHSSSINMPHSNSVNVPHSSSINMPHPSSVNMPHSSSLNMPLSNMNSPYGGTNMPYGDSGVPYGNTNIHYGNTSMPYSNTNVPYSSMSVSYDPKGMPYGNMGITYSQASTPYTNINTQYNPNNFSYDPKITESQNKPVNSMSNILENMPQNLNSPSDRANLRMGEPNNYYPNQSVKSEVSYPYSANVQNQFAGLDSISNYSEDKLPENVKPESSYYGDQSLTYDMSYSFDNSKEYTDVNSASSLSYAENQPLETTPKTEIKYENSYSENQETYDVNSTQNIAVDNSLFHQENKPLEDMGMYENTKDSMPWDDISCNSNSDIQFAVQYADLAKFGCDVTPVYANGTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -