Telo065262.1
Basic Information
- Insect
- Tillus elongatus
- Gene Symbol
- -
- Assembly
- GCA_964006375.1
- Location
- OZ023268.1:5136146-5137921[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.3 54 6.8 1.0 1 23 186 209 186 209 0.96 2 14 0.0028 0.51 13.2 1.1 1 23 215 238 215 238 0.94 3 14 6.3e-05 0.011 18.4 2.4 1 22 244 265 244 268 0.91 4 14 0.00077 0.14 15.0 1.4 1 23 274 297 274 298 0.96 5 14 0.0003 0.055 16.3 2.1 1 23 303 326 303 326 0.97 6 14 0.0066 1.2 12.0 2.1 1 23 332 355 332 355 0.98 7 14 0.00014 0.025 17.3 0.7 1 23 361 384 361 384 0.97 8 14 0.00018 0.033 17.0 1.5 1 23 390 413 390 413 0.95 9 14 0.013 2.3 11.2 0.7 1 23 418 441 418 441 0.94 10 14 0.048 8.8 9.3 0.4 1 23 447 470 447 470 0.95 11 14 0.0022 0.4 13.6 1.0 1 23 476 499 476 499 0.97 12 14 0.0023 0.43 13.5 0.7 1 23 505 528 505 528 0.97 13 14 0.019 3.4 10.6 0.5 1 23 534 557 534 557 0.96 14 14 6.2e-05 0.011 18.4 1.0 1 23 563 586 563 586 0.97
Sequence Information
- Coding Sequence
- ATGGATACAAGAGATACTTTGTTGGATAAtatagattttcaaaaaaataatacaccaCAGAGACACGGAGATAACGATGATGGATTTTCATGTTGTGAATATAGTGAGAAATGTCACATTTTCCCCAGTGATGTTTGTAAAGTCAAAAGGGAGGGCACTGGAGCGGAATGTTTAACTGGGCCACCGTTTTTCAATGGTCATGAAGATTACAAAACAATATGTGAAAGTAAGGGAGCATGTGAAACCGATGAAAAATTTCCCACTGTCAAAGTCAAAACAGAACTAGATACAAAATGCTTTGGTGGTAATGGATCGGTCAATAGCCATGCTGAACTTCTGAAAGAAGCAATTAAAACTGAAATAAATGAGTGTTTTGATATAAAAGCAGAAATGTCTGATGATGAAATGTTAGAAGATGGACAAACTTGCAATCTCAAAAGCGAAGAAGAATCGTCAACATCAAAGGAAGATGGTCAGGTAGTAGAACAAGATGTGATGACAGCTAATGTTCATCTTGAAAATCAAATACAAGTAAGCTTTGATAAGTGTAGACTTTTTAATTGCACTTCTTGTACTtataaaagtaaatataaaattGCGGTTGTGCGACACATAAAGTCAGTTCATATCAAAACGAAGGCATTTAAATGTGActcatgtgattacagtactgccgTTAGAAGTTACTTGTCGAGACACATACTCTTCAAACATACCGAGGGAAGGACATACAAGTGTGagtcatgtgattacagtactacCAACAAAAGTAGCTTGTCAAGACATATGTCATCTTATAAGCATATTGCTGAAAAACCCTTCAAATGTGGGACATGTGGTTACGGTACTGCATCTAGAGGTGACCTAAATAAACACAGACTGTCAAAACATCATGAAGAAAGACCATATAAGTGTGAGTCATGTAAATACAGTACTGCTAGAAGACGTAACTTGTCAAGGCACATACTCTCAAAACATAGTCAGGAGATGCCGTACAAGTGCGAATCTTGTGAATTTAGTACTTTTGATAAACGTAGCTTGTCACGACACATAATGTCAAAACATACCGAAGAAAGGCCATACAAGTGTGAAACGTGTGATTTCGGTACTGCCGATAGAAGTTACTTGTTAAGACACATAAGGTTAAAACATAGTGAACAAAAGTCATACCAGTGTGAGCGTTGTGATTTCAGCACTGCCGATAGAAGTCACTTGTCAAGACACATAATCTTAAAACATACGGAAAAGACATACAAGTGTGAGTCGTGTGATTACAGTACCGCCCTTAGAAGTAGCTTATCAATACATATATCATtcaagcatactgcagaaaaaccCTTCAAATGTGTGTCGTGTGGTTACAGTAGTGGATCTAGAATCGGCCTCAAAAGACACGAAATTTCAAAACATAGTGAAGAAACGCCATACAATTGTGAGTTATGTGATTACAGCACCGCTGAAAGAGATAAGTTCTCAAGACACATGATGTCAAAACATGGTGAAGAAAGGCCGTACAAGTGTGGATCTTGTGATTTTAGTACTGTTTATAAGCGTAACTTATCAGAACACATCATGATAAAACATACTGAAGAAAGGCCATATAAGTGTGACTCTTGCAATTTCAGTACTGCCATTAGAAGTAGCTTGTCAAGACATGTTATCATAAAACATAGTAAAGAAAAACGATACAAGTGTGAGACCTGCGATTTCCGTACTGCTGATAGAAGTTACTTGGCAAGACACATAAGATTAAAACATAGTAAGCAAAAGCCATAG
- Protein Sequence
- MDTRDTLLDNIDFQKNNTPQRHGDNDDGFSCCEYSEKCHIFPSDVCKVKREGTGAECLTGPPFFNGHEDYKTICESKGACETDEKFPTVKVKTELDTKCFGGNGSVNSHAELLKEAIKTEINECFDIKAEMSDDEMLEDGQTCNLKSEEESSTSKEDGQVVEQDVMTANVHLENQIQVSFDKCRLFNCTSCTYKSKYKIAVVRHIKSVHIKTKAFKCDSCDYSTAVRSYLSRHILFKHTEGRTYKCESCDYSTTNKSSLSRHMSSYKHIAEKPFKCGTCGYGTASRGDLNKHRLSKHHEERPYKCESCKYSTARRRNLSRHILSKHSQEMPYKCESCEFSTFDKRSLSRHIMSKHTEERPYKCETCDFGTADRSYLLRHIRLKHSEQKSYQCERCDFSTADRSHLSRHIILKHTEKTYKCESCDYSTALRSSLSIHISFKHTAEKPFKCVSCGYSSGSRIGLKRHEISKHSEETPYNCELCDYSTAERDKFSRHMMSKHGEERPYKCGSCDFSTVYKRNLSEHIMIKHTEERPYKCDSCNFSTAIRSSLSRHVIIKHSKEKRYKCETCDFRTADRSYLARHIRLKHSKQKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -