Basic Information

Insect: Tillus elongatus
Gene Symbol: -
Assembly: GCA_964006375.1
Location: OZ023263.1:98582674-98586700[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 7e-06 0.0013 21.4 3.8 2 23 41 62 40 62 0.97

2 10 1.3e-06 0.00025 23.7 0.5 1 23 68 90 68 90 0.98

3 10 3e-06 0.00055 22.6 0.5 1 23 96 118 96 118 0.98

4 10 0.0086 1.6 11.7 0.5 2 21 125 144 124 147 0.89

5 10 0.00014 0.025 17.3 2.9 1 23 152 174 152 174 0.98

6 10 0.042 7.7 9.5 5.1 1 23 184 207 184 207 0.97

7 10 0.0013 0.23 14.3 3.6 1 23 215 237 215 237 0.96

8 10 4.4e-07 8.1e-05 25.2 2.6 2 23 244 265 244 265 0.97

9 10 2.5e-07 4.6e-05 25.9 2.3 1 23 271 293 271 293 0.98

10 10 0.14 26 7.9 1.2 1 23 299 322 299 322 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	7e-06	0.0013	21.4	3.8	2	23	41	62	40	62	0.97
2	10	1.3e-06	0.00025	23.7	0.5	1	23	68	90	68	90	0.98
3	10	3e-06	0.00055	22.6	0.5	1	23	96	118	96	118	0.98
4	10	0.0086	1.6	11.7	0.5	2	21	125	144	124	147	0.89
5	10	0.00014	0.025	17.3	2.9	1	23	152	174	152	174	0.98
6	10	0.042	7.7	9.5	5.1	1	23	184	207	184	207	0.97
7	10	0.0013	0.23	14.3	3.6	1	23	215	237	215	237	0.96
8	10	4.4e-07	8.1e-05	25.2	2.6	2	23	244	265	244	265	0.97
9	10	2.5e-07	4.6e-05	25.9	2.3	1	23	271	293	271	293	0.98
10	10	0.14	26	7.9	1.2	1	23	299	322	299	322	0.96

Sequence Information

Coding Sequence: ATGTTAGGTAAtttacatttccttttttttttacaaaataaaaagatAGTCCAGGAATTATGGTCAACTGATGATACCAAGGAAAAACTAAAACCAGGGAATTCGAATATAGATCGTCTTGAATGTCCAATTTGTAAgaaatgttacaataaaaaaacatACTTGAGATCTCATATTAGACGTCATGGTGAAAAGAAAAAATATCCTTGCGAAATCTGTTCcaagaaatttaaaagaaaatcagATGTTATAAACCATTTGCAAGTCCATGATGAGAGCAGAGCTTATCCATGTGATATTTGTAATAAAGTGCTCAAGACAAAAGGTTCACTAACAGTTCACCGTAAAAGACATTTAAAAGATTATAAAATCGTATGCCCACAATGCAACCATGGATTCTATTCTAATAATGAGTTTCAGTTACACCTTGGAGCGAAACATGGTAAAAGCATGTTTATTTGTGACATATGTCAACGACCGTGTTATGATAAACATACACTGAAAGTACACATCCTCACTCATAATGAAGATTACAAAATCAATAAACGGTTCGAATGTCATATCTGCCAAACTAAGTTCCTACATAAACGTACACTTTCTGGTCATATAAAACGCCTACACAGTCCTGATGGAAATTCTCAGCATATGTGTGACCTGTGTGGCAAGAAACTATGTTCTAAAACAAGCCTAAAAGACCATTTGATCTTACATCAAGGTCTTAAGCCAAATGAATGCCGAGAATGTGGAAAGTGCTTTGCGAACAAAACAACTTTACGAGTTCATATACGGACACACACTGGAGAAAGGCCTTACACTTGTGAAGTTTGCAATAAATCATTCTCACAAAGAAGTCAGTACACCATACATCTTAGATATCATACTGGTGAAAGACCTTATGTATGTAAGCTTTGTCAAGAAGGATTTGTTTGTAAAAGTGTCATGGAGTTGCACATTAGGAATAAGCATAAACATATAccataa
Protein Sequence: MLGNLHFLFFLQNKKIVQELWSTDDTKEKLKPGNSNIDRLECPICKKCYNKKTYLRSHIRRHGEKKKYPCEICSKKFKRKSDVINHLQVHDESRAYPCDICNKVLKTKGSLTVHRKRHLKDYKIVCPQCNHGFYSNNEFQLHLGAKHGKSMFICDICQRPCYDKHTLKVHILTHNEDYKINKRFECHICQTKFLHKRTLSGHIKRLHSPDGNSQHMCDLCGKKLCSKTSLKDHLILHQGLKPNECRECGKCFANKTTLRVHIRTHTGERPYTCEVCNKSFSQRSQYTIHLRYHTGERPYVCKLCQEGFVCKSVMELHIRNKHKHIP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -