Basic Information

Insect: Tillus elongatus
Gene Symbol: -
Assembly: GCA_964006375.1
Location: OZ023270.1:106515004-106517106[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 5.2e-05 0.0096 18.6 1.6 2 23 51 73 51 73 0.95

2 14 0.0056 1 12.3 3.9 1 20 80 99 80 103 0.90

3 14 0.0012 0.23 14.3 2.3 1 23 196 219 196 219 0.95

4 14 0.0094 1.7 11.6 2.1 2 23 227 249 226 249 0.96

5 14 0.0011 0.21 14.4 3.9 1 23 256 279 256 279 0.98

6 14 8.9e-05 0.016 17.9 5.7 1 23 286 309 286 309 0.98

7 14 4.8e-05 0.0089 18.8 1.6 2 23 317 339 316 339 0.95

8 14 0.0091 1.7 11.6 6.4 1 23 346 369 346 369 0.96

9 14 0.0038 0.7 12.8 1.2 1 23 524 547 524 547 0.95

10 14 7.1e-05 0.013 18.2 4.1 1 23 554 577 554 577 0.98

11 14 0.00084 0.15 14.9 3.4 1 23 584 607 584 607 0.97

12 14 2.8e-05 0.0052 19.5 2.4 1 23 614 637 614 637 0.98

13 14 0.00012 0.022 17.5 0.7 2 23 645 667 644 667 0.94

14 14 0.0055 1 12.3 8.0 1 23 674 696 674 697 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	5.2e-05	0.0096	18.6	1.6	2	23	51	73	51	73	0.95
2	14	0.0056	1	12.3	3.9	1	20	80	99	80	103	0.90
3	14	0.0012	0.23	14.3	2.3	1	23	196	219	196	219	0.95
4	14	0.0094	1.7	11.6	2.1	2	23	227	249	226	249	0.96
5	14	0.0011	0.21	14.4	3.9	1	23	256	279	256	279	0.98
6	14	8.9e-05	0.016	17.9	5.7	1	23	286	309	286	309	0.98
7	14	4.8e-05	0.0089	18.8	1.6	2	23	317	339	316	339	0.95
8	14	0.0091	1.7	11.6	6.4	1	23	346	369	346	369	0.96
9	14	0.0038	0.7	12.8	1.2	1	23	524	547	524	547	0.95
10	14	7.1e-05	0.013	18.2	4.1	1	23	554	577	554	577	0.98
11	14	0.00084	0.15	14.9	3.4	1	23	584	607	584	607	0.97
12	14	2.8e-05	0.0052	19.5	2.4	1	23	614	637	614	637	0.98
13	14	0.00012	0.022	17.5	0.7	2	23	645	667	644	667	0.94
14	14	0.0055	1	12.3	8.0	1	23	674	696	674	697	0.94

Sequence Information

Coding Sequence: ATGGGGATTGTCGAGAAACAAATTAATGTGTGTGATAACCTGctagaaacaaattataaatgtgaAAACAAAACTTGTGATTTTATTAGAAAAAGGAAGAGCCGTTTAAAAGGCGATTTAAAAATAAAGGACCTAAGTATAGAACCTAATGTATGCAAATTATGCGAGAAGACTTTCAAATCCAAAAAGAATTTATACGAGCATGTCAGGTTGCAACACAGCGGAAATTACAAATTATTCAATTGTGAATATTGTAAGTACAAAAGTAAAAGAAAGAATCATCTAACGAGACATGTGGGTGCTAAACATAGTGAATTTACCATCCTAACAGTTGAAGTTAATAAAGATAACACATTGAATATCGAGAAAATTAAAGAAACTAGCAAGTTAAAGTCAAATCATCAAGTAGGTGATGAGAAACAATCCAGCTTAAAGCATAACAATGATGCACAACATGACAACACTGCAGAACATGCAGAGAGGCATGGTTGTAAAGAAAATTGTTTAGTAAAATCATCAGAAGGgaagttaaaggaaaaaaaagacaaatgtatggcaaataaatatcaaagaattaaaaaaacatttatctgTGAACATTGCGGCTCTAAGTTCAATTACAAAAAGAGCCTAGAAGATCACCTAACTGTGAAACACGACGATACAAGTGAAATGTTATACTGTTACATCTGCCGTTACAAAACAAAGAGGAAAAAAGATTTAGCCATACATCTCAAACGAAAACACGGCAGTGACAAGGAAATATACACGTGTCAGTTCTGCAATCAGACTTACAGAACCAAGACAGACCTGCATGGACATATTAAAGTGAAACACGACGAATCCACCCAAACCTACCACTGCGAAACCTGTGATTATACAACGAAACGAAAAAGCAACTTCAACAACCACATTAAAACCAAACACGTTGGTAATATGGAGTCTTTGCCCTGCAAGATGTGTGGAAAAATCTTCAAACTCCAAAGGAATCTCCTACATCACATTAAGCTACAACATAGTAATAACTATACTGTCTTTTGTTGCCGGTATTGCCAATACAAAACAAAGAAGAGGAGCAACTTATCACGACACATCTTGTCAAGGCACAATCAAGTTCAGGACTTTAAAAACGTTGCAGTTGAAGAAATTATTGTAAAGAATGAAGTAATTAATACAGATGAATCTAAAAGTGAAAAGACATATCAAAACAATTCGTCTAACGCCATCGCTAAACTAAATgattgtaattttgaaaataatgacAAAAGTGATGTGGATCAAGTTGGAGGTGATGACTCAACTAAAAACATATTGGAAGATACTAAAACAGCTGAAGAAGAAGCTGAAAAGGTTGTAGAAAATAGTTGTCATCAAGATTTTGTGGAAGATTGTTCAGAAAATGAAGATATGATGAGTTTAGATGGGTGTCATTTAGACGAAACTACTAGTGACGATTTTCCAGTAGCTAATGATCCAGAAAAATCACAGCAACTAGATGATGTTCCAGAACAAACTTCCGAGCAACTTCAAAAACAATTACCGGAAGAAAAGTGTGTGAAGAAGAGAAAGTTCATGTGTGAGTTTTGCGGTTCGAATTTCAACTACAAGAAAAGCCTAGAAGACCATTTGACGGTGAAACATGATGATAGCAGTGAATTATTCCAGTGCAATGGTTGCAAATACAAAACCAAAAGAAAGAAAGACCTCGTCAAACATATGAAACGGAGACACAGTGGTGATGAGGAGGTATATAAGTGTTTATTCTGTGGTCACACATATAAAACTAAGACAGATCTCCGTGGTCATGTCAAGGTGAAACATGACGATACAAGTGAAACTTTTCGATGTGGTGAGTGCGGTTATTCGACTAAAAGAAAAAGCAGCTATAACAACCATGTGAAGACAAAACATGTTGTGAATATGGAGTTTTCTCCTTGTGGAGAATGTGACAAAATATTTAAATCGAAGAGGAACTTGTACGATCACTTTAGGTTGCAGCATAATGAAAATTTGAAAGTGTTTGACTGTCAGTTTTGTGATTATAAGACAAAGAGAAAAAGTCACTTGACTAGACATGTTTTTAGGCACCACAAAAAGTCGTAG
Protein Sequence: MGIVEKQINVCDNLLETNYKCENKTCDFIRKRKSRLKGDLKIKDLSIEPNVCKLCEKTFKSKKNLYEHVRLQHSGNYKLFNCEYCKYKSKRKNHLTRHVGAKHSEFTILTVEVNKDNTLNIEKIKETSKLKSNHQVGDEKQSSLKHNNDAQHDNTAEHAERHGCKENCLVKSSEGKLKEKKDKCMANKYQRIKKTFICEHCGSKFNYKKSLEDHLTVKHDDTSEMLYCYICRYKTKRKKDLAIHLKRKHGSDKEIYTCQFCNQTYRTKTDLHGHIKVKHDESTQTYHCETCDYTTKRKSNFNNHIKTKHVGNMESLPCKMCGKIFKLQRNLLHHIKLQHSNNYTVFCCRYCQYKTKKRSNLSRHILSRHNQVQDFKNVAVEEIIVKNEVINTDESKSEKTYQNNSSNAIAKLNDCNFENNDKSDVDQVGGDDSTKNILEDTKTAEEEAEKVVENSCHQDFVEDCSENEDMMSLDGCHLDETTSDDFPVANDPEKSQQLDDVPEQTSEQLQKQLPEEKCVKKRKFMCEFCGSNFNYKKSLEDHLTVKHDDSSELFQCNGCKYKTKRKKDLVKHMKRRHSGDEEVYKCLFCGHTYKTKTDLRGHVKVKHDDTSETFRCGECGYSTKRKSSYNNHVKTKHVVNMEFSPCGECDKIFKSKRNLYDHFRLQHNENLKVFDCQFCDYKTKRKSHLTRHVFRHHKKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -